RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W HST3P53687 447 aa6.16□□□□□ -1.42
BUD8YLR353W TY1A-DR3Q12441 440 aa6.16□□□□□ -1.42
BUD8YLR353W PRE9P23638 258 aaKnown RBP6.15□□□□□ -1.42
BUD8YLR353W DAL1P32375 460 aa6.15□□□□□ -1.42
BUD8YLR353W ASH1P34233 588 aa6.15□□□□□ -1.42
BUD8YLR353W VTC4P47075 721 aa6.15□□□□□ -1.42
BUD8YLR353W WRS1Q12109 432 aaKnown RBP6.15□□□□□ -1.42
BUD8YLR353W LEU1P07264 779 aaKnown RBP6.15□□□□□ -1.43
BUD8YLR353W KAR2P16474 682 aaKnown RBP6.15□□□□□ -1.43
BUD8YLR353W TOP1P04786 769 aa6.14□□□□□ -1.43
BUD8YLR353W PDC6P26263 563 aaKnown RBP6.14□□□□□ -1.43
BUD8YLR353W NAB2P32505 525 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
BUD8YLR353W SPC42P36094 363 aa6.14□□□□□ -1.43
BUD8YLR353W AIM46P38885 310 aa6.14□□□□□ -1.43
BUD8YLR353W IOC3P43596 787 aa6.14□□□□□ -1.43
BUD8YLR353W YPL109CQ02981 657 aa6.14□□□□□ -1.43
BUD8YLR353W PSH1Q12161 406 aa6.14□□□□□ -1.43
BUD8YLR353W BUG1Q12191 341 aa6.14□□□□□ -1.43
BUD8YLR353W SRP40P32583 406 aaPredicted RBP6.13□□□□□ -1.43
BUD8YLR353W YKL133CP36066 463 aa6.13□□□□□ -1.43
BUD8YLR353W AIR1P40507 360 aaKnown RBP6.13□□□□□ -1.43
BUD8YLR353W CWC24P53769 259 aa6.13□□□□□ -1.43
BUD8YLR353W YAF9P53930 226 aa6.13□□□□□ -1.43
BUD8YLR353W CTR9P89105 1077 aa6.13□□□□□ -1.43
BUD8YLR353W RAS1P01119 309 aa6.13□□□□□ -1.43
BUD8YLR353W RRT14P40470 206 aa6.13□□□□□ -1.43
BUD8YLR353W PTK2P47116 818 aaKnown RBP6.13□□□□□ -1.43
BUD8YLR353W SKP1P52286 194 aa6.13□□□□□ -1.43
BUD8YLR353W MSH6Q03834 1242 aa6.13□□□□□ -1.43
BUD8YLR353W EMG1Q06287 252 aaKnown RBP6.13□□□□□ -1.43
BUD8YLR353W MCM5P29496 775 aaKnown RBP6.12□□□□□ -1.43
BUD8YLR353W CUS1Q02554 436 aaPredicted RBP6.12□□□□□ -1.43
BUD8YLR353W NSE3Q05541 303 aa6.12□□□□□ -1.43
BUD8YLR353W ADI1Q03677 179 aa6.11□□□□□ -1.43
BUD8YLR353W FIG2P25653 1609 aa6.11□□□□□ -1.43
BUD8YLR353W CDC34P14682 295 aa6.11□□□□□ -1.43
BUD8YLR353W YKL091CP33324 310 aaKnown RBP6.11□□□□□ -1.43
BUD8YLR353W NUT1P53114 1132 aa6.11□□□□□ -1.43
BUD8YLR353W RNH70P53331 553 aa6.11□□□□□ -1.43
BUD8YLR353W ULP1Q02724 621 aa6.11□□□□□ -1.43
BUD8YLR353W TCB1Q12466 1186 aa6.11□□□□□ -1.43
BUD8YLR353W STI1P15705 589 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
BUD8YLR353W RGP1P16664 663 aa6.1□□□□□ -1.43
BUD8YLR353W UGA4P32837 571 aa6.1□□□□□ -1.43
BUD8YLR353W ECM2P38241 364 aaKnown RBP6.1□□□□□ -1.43
BUD8YLR353W YIL165CP40446 119 aa6.1□□□□□ -1.43
BUD8YLR353W YJR098CP47139 656 aa6.1□□□□□ -1.43
BUD8YLR353W OSW7P43611 510 aa6.09□□□□□ -1.43
BUD8YLR353W NUP85P46673 744 aa6.09□□□□□ -1.43
BUD8YLR353W FAA4P47912 694 aaKnown RBP6.09□□□□□ -1.43
BUD8YLR353W GDE1Q02979 1223 aa6.09□□□□□ -1.43
BUD8YLR353W PYC2P32327 1180 aaKnown RBP6.09□□□□□ -1.44
BUD8YLR353W DUT1P33317 147 aa6.09□□□□□ -1.44
BUD8YLR353W RVS167P39743 482 aaKnown RBP6.09□□□□□ -1.44
BUD8YLR353W PIC2P40035 300 aa6.09□□□□□ -1.44
BUD8YLR353W YJR115WP47152 169 aa6.09□□□□□ -1.44
BUD8YLR353W ITC1P53125 1264 aa6.09□□□□□ -1.44
BUD8YLR353W MON1P53129 644 aa6.09□□□□□ -1.44
BUD8YLR353W UTP22P53254 1237 aaPredicted RBP6.09□□□□□ -1.44
BUD8YLR353W LSC2P53312 427 aa6.09□□□□□ -1.44
BUD8YLR353W RPN4Q03465 531 aa6.09□□□□□ -1.44
BUD8YLR353W GCN1P33892 2672 aaKnown RBP6.08□□□□□ -1.44
BUD8YLR353W RPS9BP05755 195 aaKnown RBP6.08□□□□□ -1.44
BUD8YLR353W CIT2P08679 460 aa6.08□□□□□ -1.44
BUD8YLR353W DUR3P33413 735 aa6.08□□□□□ -1.44
BUD8YLR353W APM2P38700 605 aa6.08□□□□□ -1.44
BUD8YLR353W HVG1P0CE11 249 aa6.07□□□□□ -1.44
BUD8YLR353W TAT2P38967 592 aa6.07□□□□□ -1.44
BUD8YLR353W YGR053CP53234 283 aa6.07□□□□□ -1.44
BUD8YLR353W YNR014WP53719 212 aa6.07□□□□□ -1.44
BUD8YLR353W UBP15P50101 1230 aa6.06□□□□□ -1.44
BUD8YLR353W PMT7Q06644 662 aa6.06□□□□□ -1.44
BUD8YLR353W BDF2Q07442 638 aa6.06□□□□□ -1.44
BUD8YLR353W RTT10Q08924 1013 aa6.06□□□□□ -1.44
BUD8YLR353W CDC53Q12018 815 aaKnown RBP6.06□□□□□ -1.44
BUD8YLR353W GRX1P25373 110 aaKnown RBP6.06□□□□□ -1.44
BUD8YLR353W BUD21Q08492 214 aaPredicted RBP6.06□□□□□ -1.44
BUD8YLR353W GCR1P07261 785 aa6.05□□□□□ -1.44
BUD8YLR353W PPG1P32838 368 aa6.05□□□□□ -1.44
BUD8YLR353W BUD6P41697 788 aa6.05□□□□□ -1.44
BUD8YLR353W YNR040WP53736 256 aa6.05□□□□□ -1.44
BUD8YLR353W RRP14P36080 434 aaKnown RBP6.04□□□□□ -1.44
BUD8YLR353W RIM11P38615 370 aa6.04□□□□□ -1.44
BUD8YLR353W ATG13Q06628 738 aa6.04□□□□□ -1.44
BUD8YLR353W OPI10Q08202 246 aa6.04□□□□□ -1.44
BUD8YLR353W YOR131CQ12486 218 aa6.04□□□□□ -1.44
BUD8YLR353W NCL1P38205 684 aaKnown RBP6.04□□□□□ -1.44
BUD8YLR353W YHR131CP38835 850 aa6.04□□□□□ -1.44
BUD8YLR353W FAR11P53917 953 aa6.04□□□□□ -1.44
BUD8YLR353W SQT1P35184 431 aa6.03□□□□□ -1.44
BUD8YLR353W PBP2P38151 413 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
BUD8YLR353W SPF1P39986 1215 aaKnown RBP6.03□□□□□ -1.44
BUD8YLR353W RSM26P47141 266 aa6.03□□□□□ -1.44
BUD8YLR353W ALG12P53730 551 aa6.03□□□□□ -1.44
BUD8YLR353W TDA5Q06417 326 aaKnown RBP6.03□□□□□ -1.44
BUD8YLR353W TMA46Q12000 345 aaKnown RBP6.03□□□□□ -1.44
BUD8YLR353W YDR034W-BQ6Q5X2 51 aa6.03□□□□□ -1.44
BUD8YLR353W CDC19P00549 500 aaKnown RBP6.02□□□□□ -1.45
BUD8YLR353W RPP1AP05318 106 aaPredicted RBP6.02□□□□□ -1.45
BUD8YLR353W PRI2P20457 528 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms