RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C VMA4P22203 233 aaKnown RBP5.78□□□□□ -1.48
ATG38YLR211C LRG1P35688 1017 aa5.78□□□□□ -1.48
ATG38YLR211C YOR059CQ08448 450 aaKnown RBP5.78□□□□□ -1.48
ATG38YLR211C RET1P22276 1149 aaKnown RBP5.77□□□□□ -1.49
ATG38YLR211C MCM2P29469 868 aa5.77□□□□□ -1.49
ATG38YLR211C SLD2P34252 453 aa5.77□□□□□ -1.49
ATG38YLR211C AVT1P47082 602 aa5.77□□□□□ -1.49
ATG38YLR211C POL32P47110 350 aa5.77□□□□□ -1.49
ATG38YLR211C YGR122WP53272 402 aa5.77□□□□□ -1.49
ATG38YLR211C YLR257WQ06146 321 aaKnown RBP5.77□□□□□ -1.49
ATG38YLR211C PUS7Q08647 676 aaKnown RBP5.77□□□□□ -1.49
ATG38YLR211C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
ATG38YLR211C AFG2P32794 780 aa5.76□□□□□ -1.49
ATG38YLR211C YNR063WP53749 607 aa5.76□□□□□ -1.49
ATG38YLR211C TPP1Q03796 238 aa5.76□□□□□ -1.49
ATG38YLR211C RSA3Q05942 220 aaKnown RBP5.76□□□□□ -1.49
ATG38YLR211C CYC8P14922 966 aa5.75□□□□□ -1.49
ATG38YLR211C RPS26AP39938 119 aaKnown RBP5.75□□□□□ -1.49
ATG38YLR211C RPS26BP39939 119 aaKnown RBP5.75□□□□□ -1.49
ATG38YLR211C FYV10P40492 516 aa5.75□□□□□ -1.49
ATG38YLR211C YJR107WP47145 328 aa5.75□□□□□ -1.49
ATG38YLR211C SSY1Q03770 852 aa5.75□□□□□ -1.49
ATG38YLR211C TRE1Q08919 783 aa5.75□□□□□ -1.49
ATG38YLR211C RAD2P07276 1031 aa5.74□□□□□ -1.49
ATG38YLR211C PRE9P23638 258 aaKnown RBP5.74□□□□□ -1.49
ATG38YLR211C ADD66P36040 267 aa5.74□□□□□ -1.49
ATG38YLR211C SPR28Q04921 423 aa5.74□□□□□ -1.49
ATG38YLR211C LPX1Q12405 387 aaKnown RBP5.74□□□□□ -1.49
ATG38YLR211C SAM35P14693 329 aa5.73□□□□□ -1.49
ATG38YLR211C HSP78P33416 811 aa5.73□□□□□ -1.49
ATG38YLR211C PRO1P32264 428 aa5.72□□□□□ -1.49
ATG38YLR211C SEG2P34250 1132 aa5.72□□□□□ -1.49
ATG38YLR211C POL12P38121 705 aaPredicted RBP5.72□□□□□ -1.49
ATG38YLR211C QNS1P38795 714 aaKnown RBP5.72□□□□□ -1.49
ATG38YLR211C MRPS18P42847 217 aa5.72□□□□□ -1.49
ATG38YLR211C GNP1P48813 663 aa5.72□□□□□ -1.49
ATG38YLR211C RKM2Q03942 479 aa5.72□□□□□ -1.49
ATG38YLR211C EST2Q06163 884 aa5.72□□□□□ -1.49
ATG38YLR211C HDA2Q06629 674 aa5.72□□□□□ -1.49
ATG38YLR211C MCD1Q12158 566 aa5.72□□□□□ -1.49
ATG38YLR211C NSI1Q12457 570 aa5.72□□□□□ -1.49
ATG38YLR211C DFG16Q99234 619 aa5.72□□□□□ -1.49
ATG38YLR211C ADP1P25371 1049 aa5.71□□□□□ -1.5
ATG38YLR211C HEM3P28789 327 aa5.71□□□□□ -1.5
ATG38YLR211C PTC7P38797 343 aa5.71□□□□□ -1.5
ATG38YLR211C YJL045WP47052 634 aa5.71□□□□□ -1.5
ATG38YLR211C ELM1P32801 640 aa5.7□□□□□ -1.5
ATG38YLR211C HXT13P39924 564 aa5.7□□□□□ -1.5
ATG38YLR211C HXT17P53631 564 aa5.7□□□□□ -1.5
ATG38YLR211C ORC3P54790 616 aa5.7□□□□□ -1.5
ATG38YLR211C HXT15P54854 567 aa5.7□□□□□ -1.5
ATG38YLR211C ROD1Q02805 837 aa5.7□□□□□ -1.5
ATG38YLR211C LAP2Q10740 671 aa5.7□□□□□ -1.5
ATG38YLR211C DED1P06634 604 aaKnown RBP5.69□□□□□ -1.5
ATG38YLR211C RNQ1P25367 405 aa5.69□□□□□ -1.5
ATG38YLR211C MGE1P38523 228 aa5.69□□□□□ -1.5
ATG38YLR211C IRC24P40580 263 aa5.69□□□□□ -1.5
ATG38YLR211C GTS1P40956 396 aa5.69□□□□□ -1.5
ATG38YLR211C GCR1P07261 785 aa5.68□□□□□ -1.5
ATG38YLR211C SEC8P32855 1065 aa5.68□□□□□ -1.5
ATG38YLR211C HSE1P38753 452 aa5.68□□□□□ -1.5
ATG38YLR211C RAT1Q02792 1006 aaKnown RBP5.68□□□□□ -1.5
ATG38YLR211C AOS1Q06624 347 aa5.68□□□□□ -1.5
ATG38YLR211C RCL1Q08096 367 aaPredicted RBP5.68□□□□□ -1.5
ATG38YLR211C YHL012WP38709 493 aa5.67□□□□□ -1.5
ATG38YLR211C VPS53P47061 822 aa5.67□□□□□ -1.5
ATG38YLR211C HRK1Q08732 759 aaKnown RBP5.67□□□□□ -1.5
ATG38YLR211C TAF13P11747 167 aa5.66□□□□□ -1.5
ATG38YLR211C KIP1P28742 1111 aa5.66□□□□□ -1.5
ATG38YLR211C TSA1P34760 196 aaKnown RBP5.66□□□□□ -1.5
ATG38YLR211C ALG3P38179 458 aa5.66□□□□□ -1.5
ATG38YLR211C ATG14P38270 344 aa5.66□□□□□ -1.5
ATG38YLR211C GPB2P39717 880 aa5.66□□□□□ -1.5
ATG38YLR211C ECL1P48235 211 aa5.66□□□□□ -1.5
ATG38YLR211C SIW14P53965 281 aa5.66□□□□□ -1.5
ATG38YLR211C YDL177CQ12257 170 aa5.66□□□□□ -1.5
ATG38YLR211C MKK2P32491 506 aa5.65□□□□□ -1.5
ATG38YLR211C YSC84P32793 468 aa5.65□□□□□ -1.5
ATG38YLR211C CDA2Q06703 312 aa5.65□□□□□ -1.5
ATG38YLR211C PTC5Q12511 572 aa5.65□□□□□ -1.5
ATG38YLR211C MDL2P33311 773 aa5.64□□□□□ -1.51
ATG38YLR211C MRL1Q06815 381 aa5.64□□□□□ -1.51
ATG38YLR211C OYE2Q03558 400 aaKnown RBP5.63□□□□□ -1.51
ATG38YLR211C GAS1P22146 559 aaKnown RBP5.62□□□□□ -1.51
ATG38YLR211C YFL054CP43549 646 aa5.62□□□□□ -1.51
ATG38YLR211C SNF5P18480 905 aa5.61□□□□□ -1.51
ATG38YLR211C SRO9P25567 434 aaKnown RBP5.61□□□□□ -1.51
ATG38YLR211C DUT1P33317 147 aa5.61□□□□□ -1.51
ATG38YLR211C BAP2P38084 609 aa5.61□□□□□ -1.51
ATG38YLR211C ENT3P47160 408 aa5.61□□□□□ -1.51
ATG38YLR211C ESF1Q06344 628 aaKnown RBP5.61□□□□□ -1.51
ATG38YLR211C RSC58Q07979 502 aa5.61□□□□□ -1.51
ATG38YLR211C PEP7P32609 515 aa5.6□□□□□ -1.51
ATG38YLR211C ETP1P38748 585 aaKnown RBP5.6□□□□□ -1.51
ATG38YLR211C NIT1P40447 199 aa5.6□□□□□ -1.51
ATG38YLR211C SPO21Q12411 609 aa5.6□□□□□ -1.51
ATG38YLR211C SYP1P25623 870 aaKnown RBP5.59□□□□□ -1.51
ATG38YLR211C AIM26P32858 118 aa5.59□□□□□ -1.51
ATG38YLR211C RER2P35196 286 aa5.59□□□□□ -1.51
ATG38YLR211C HOS3Q02959 697 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms