RNA–Protein interactions for RNA: YLR098C

CHA4, Transcript of DNA binding transcriptional activator, yeastyeast

Gene CHA4, Length 1,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHA4YLR098C YLL054CQ12244 843 aa4.43□□□□□ -1.7
CHA4YLR098C VTH1P40438 1549 aa4.43□□□□□ -1.7
CHA4YLR098C VTH2P40890 1549 aa4.43□□□□□ -1.7
CHA4YLR098C SPT7P35177 1332 aa4.43□□□□□ -1.7
CHA4YLR098C WHI3P34761 661 aaKnown RBP4.42□□□□□ -1.7
CHA4YLR098C SEA4P38164 1038 aa4.42□□□□□ -1.7
CHA4YLR098C MON1P53129 644 aa4.42□□□□□ -1.7
CHA4YLR098C UTP22P53254 1237 aaPredicted RBP4.42□□□□□ -1.7
CHA4YLR098C SDH1Q00711 640 aa4.42□□□□□ -1.7
CHA4YLR098C MEC3Q02574 474 aa4.42□□□□□ -1.7
CHA4YLR098C ALG6Q12001 544 aaKnown RBP4.42□□□□□ -1.7
CHA4YLR098C VPS15P22219 1454 aa4.42□□□□□ -1.7
CHA4YLR098C GCD1P09032 578 aaPredicted RBP4.42□□□□□ -1.7
CHA4YLR098C AVT1P47082 602 aa4.42□□□□□ -1.7
CHA4YLR098C YAF9P53930 226 aa4.42□□□□□ -1.7
CHA4YLR098C PMT7Q06644 662 aa4.42□□□□□ -1.7
CHA4YLR098C NOC3Q07896 663 aaPredicted RBP4.41□□□□□ -1.7
CHA4YLR098C NUP159P40477 1460 aa4.41□□□□□ -1.7
CHA4YLR098C MCM5P29496 775 aaKnown RBP4.4□□□□□ -1.7
CHA4YLR098C REI1P38344 393 aaPredicted RBP4.4□□□□□ -1.7
CHA4YLR098C MMM1P41800 426 aa4.4□□□□□ -1.7
CHA4YLR098C SNT2P53127 1403 aa4.4□□□□□ -1.7
CHA4YLR098C TY1A-LR4P0C2I8 440 aaKnown RBP4.4□□□□□ -1.71
CHA4YLR098C TY1A-DR6P0CX70 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-ER1P0CX71 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-LR2P0CX72 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-PLP0CX73 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-JR1P0CX74 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-LR3P0CX75 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-ML2P0CX76 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-GR1Q12085 440 aa4.4□□□□□ -1.71
CHA4YLR098C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.4□□□□□ -1.71
CHA4YLR098C TY1A-OLQ92392 440 aaKnown RBP4.4□□□□□ -1.71
CHA4YLR098C IRC20Q06554 1556 aa4.4□□□□□ -1.71
CHA4YLR098C YHL050CP38721 697 aa4.39□□□□□ -1.71
CHA4YLR098C YHR219WP38900 624 aa4.39□□□□□ -1.71
CHA4YLR098C IRC24P40580 263 aa4.39□□□□□ -1.71
CHA4YLR098C CIT3P43635 486 aa4.39□□□□□ -1.71
CHA4YLR098C SAM37P50110 327 aa4.39□□□□□ -1.71
CHA4YLR098C RPS4AP0CX35 261 aaKnown RBP4.38□□□□□ -1.71
CHA4YLR098C RPS4BP0CX36 261 aaKnown RBP4.38□□□□□ -1.71
CHA4YLR098C RVS167P39743 482 aaKnown RBP4.38□□□□□ -1.71
CHA4YLR098C MSH4P40965 878 aaPredicted RBP4.38□□□□□ -1.71
CHA4YLR098C PDR5P33302 1511 aaKnown RBP4.38□□□□□ -1.71
CHA4YLR098C CAT8P39113 1433 aa4.38□□□□□ -1.71
CHA4YLR098C PRS1P32895 427 aaKnown RBP4.38□□□□□ -1.71
CHA4YLR098C YGR045CP53229 120 aa4.38□□□□□ -1.71
CHA4YLR098C RCM1P53972 490 aa4.38□□□□□ -1.71
CHA4YLR098C EAR1Q03212 550 aa4.38□□□□□ -1.71
CHA4YLR098C NTE1Q04958 1679 aa4.38□□□□□ -1.71
CHA4YLR098C RPO21P04050 1733 aaKnown RBP4.37□□□□□ -1.71
CHA4YLR098C ELA1P53861 379 aaPredicted RBP4.37□□□□□ -1.71
CHA4YLR098C YCS4Q06156 1176 aa4.37□□□□□ -1.71
CHA4YLR098C CDC25P04821 1589 aa4.37□□□□□ -1.71
CHA4YLR098C SSF1P38789 453 aaPredicted RBP4.36□□□□□ -1.71
CHA4YLR098C SLS1P42900 643 aa4.36□□□□□ -1.71
CHA4YLR098C GEA2P39993 1459 aaKnown RBP4.36□□□□□ -1.71
CHA4YLR098C SRB8P25648 1427 aa4.36□□□□□ -1.71
CHA4YLR098C YLR419WQ06698 1435 aaKnown RBP4.36□□□□□ -1.71
CHA4YLR098C LRG1P35688 1017 aa4.36□□□□□ -1.71
CHA4YLR098C YKL077WP36081 392 aa4.36□□□□□ -1.71
CHA4YLR098C EXO5P38289 585 aa4.36□□□□□ -1.71
CHA4YLR098C CIC1P38779 376 aaKnown RBP4.36□□□□□ -1.71
CHA4YLR098C ALT1P52893 592 aa4.36□□□□□ -1.71
CHA4YLR098C NSI1Q12457 570 aa4.36□□□□□ -1.71
CHA4YLR098C ARL1P38116 183 aaKnown RBP4.35□□□□□ -1.71
CHA4YLR098C NEM1P38757 446 aa4.35□□□□□ -1.71
CHA4YLR098C OYE3P41816 400 aaPredicted RBP4.35□□□□□ -1.71
CHA4YLR098C AVO1Q08236 1176 aa4.35□□□□□ -1.71
CHA4YLR098C YOR059CQ08448 450 aaKnown RBP4.35□□□□□ -1.71
CHA4YLR098C ARO1P08566 1588 aaKnown RBP4.35□□□□□ -1.71
CHA4YLR098C NFS1P25374 497 aa4.34□□□□□ -1.71
CHA4YLR098C POL12P38121 705 aaPredicted RBP4.34□□□□□ -1.71
CHA4YLR098C PHO4P07270 312 aaKnown RBP4.34□□□□□ -1.71
CHA4YLR098C UGA4P32837 571 aa4.34□□□□□ -1.71
CHA4YLR098C AOS1Q06624 347 aa4.34□□□□□ -1.71
CHA4YLR098C MHP1P43638 1398 aa4.34□□□□□ -1.72
CHA4YLR098C MET4P32389 672 aa4.33□□□□□ -1.72
CHA4YLR098C ELM1P32801 640 aa4.33□□□□□ -1.72
CHA4YLR098C SMY2P32909 740 aaKnown RBP4.33□□□□□ -1.72
CHA4YLR098C PRP40P33203 583 aaKnown RBP4.33□□□□□ -1.72
CHA4YLR098C SEG2P34250 1132 aa4.33□□□□□ -1.72
CHA4YLR098C SHU2P38957 223 aa4.33□□□□□ -1.72
CHA4YLR098C RPA190P10964 1664 aaKnown RBP4.33□□□□□ -1.72
CHA4YLR098C NOG1Q02892 647 aaKnown RBP4.33□□□□□ -1.72
CHA4YLR098C DAL4Q04895 635 aa4.33□□□□□ -1.72
CHA4YLR098C TOS4Q06266 489 aa4.33□□□□□ -1.72
CHA4YLR098C YVC1Q12324 675 aa4.33□□□□□ -1.72
CHA4YLR098C DFG16Q99234 619 aa4.33□□□□□ -1.72
CHA4YLR098C RNQ1P25367 405 aa4.32□□□□□ -1.72
CHA4YLR098C VPS35P34110 944 aa4.32□□□□□ -1.72
CHA4YLR098C NNK1P36003 928 aa4.32□□□□□ -1.72
CHA4YLR098C PEX13P80667 386 aa4.32□□□□□ -1.72
CHA4YLR098C MSC6Q08818 692 aaKnown RBP4.32□□□□□ -1.72
CHA4YLR098C GDB1Q06625 1536 aa4.31□□□□□ -1.72
CHA4YLR098C MSH3P25336 1018 aa4.31□□□□□ -1.72
CHA4YLR098C GCD6P32501 712 aaKnown RBP4.31□□□□□ -1.72
CHA4YLR098C HSP78P33416 811 aa4.31□□□□□ -1.72
CHA4YLR098C PPX1P38698 397 aa4.31□□□□□ -1.72
CHA4YLR098C STM1P39015 273 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms