RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W VMA4P22203 233 aaKnown RBP3.87□□□□□ -1.79
MSL1YIR009W RET1P22276 1149 aaKnown RBP3.87□□□□□ -1.79
MSL1YIR009W STM1P39015 273 aaKnown RBP3.87□□□□□ -1.79
MSL1YIR009W GTS1P40956 396 aa3.87□□□□□ -1.79
MSL1YIR009W DAK2P43550 591 aa3.87□□□□□ -1.79
MSL1YIR009W RSA3Q05942 220 aaKnown RBP3.87□□□□□ -1.79
MSL1YIR009W MSC6Q08818 692 aaKnown RBP3.87□□□□□ -1.79
MSL1YIR009W WHI5Q12416 295 aa3.87□□□□□ -1.79
MSL1YIR009W THI80P35202 319 aa3.86□□□□□ -1.79
MSL1YIR009W RDH54P38086 958 aa3.86□□□□□ -1.79
MSL1YIR009W HSE1P38753 452 aa3.86□□□□□ -1.79
MSL1YIR009W PEX28P38848 579 aa3.86□□□□□ -1.79
MSL1YIR009W NMD3P38861 518 aaKnown RBP3.86□□□□□ -1.79
MSL1YIR009W RSM26P47141 266 aa3.86□□□□□ -1.79
MSL1YIR009W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
MSL1YIR009W HEM13P11353 328 aaKnown RBP3.85□□□□□ -1.79
MSL1YIR009W SQT1P35184 431 aa3.85□□□□□ -1.79
MSL1YIR009W YHL012WP38709 493 aa3.85□□□□□ -1.79
MSL1YIR009W YGL140CP53120 1219 aa3.85□□□□□ -1.79
MSL1YIR009W HRK1Q08732 759 aaKnown RBP3.85□□□□□ -1.79
MSL1YIR009W LAP2Q10740 671 aa3.85□□□□□ -1.79
MSL1YIR009W YDL177CQ12257 170 aa3.85□□□□□ -1.79
MSL1YIR009W YCR015CP25616 317 aa3.84□□□□□ -1.79
MSL1YIR009W MDL2P33311 773 aa3.84□□□□□ -1.79
MSL1YIR009W YJL045WP47052 634 aa3.84□□□□□ -1.79
MSL1YIR009W YPL109CQ02981 657 aa3.84□□□□□ -1.79
MSL1YIR009W ADI1Q03677 179 aa3.84□□□□□ -1.79
MSL1YIR009W RKM2Q03942 479 aa3.84□□□□□ -1.79
MSL1YIR009W ESC8Q08119 714 aa3.84□□□□□ -1.79
MSL1YIR009W OXR1Q08952 273 aa3.84□□□□□ -1.79
MSL1YIR009W HXK1P04806 485 aaKnown RBP3.83□□□□□ -1.8
MSL1YIR009W SEC23P15303 768 aaKnown RBP3.83□□□□□ -1.8
MSL1YIR009W PRP6P19735 899 aaPredicted RBP3.83□□□□□ -1.8
MSL1YIR009W ADD66P36040 267 aa3.83□□□□□ -1.8
MSL1YIR009W ATG14P38270 344 aa3.83□□□□□ -1.8
MSL1YIR009W QNS1P38795 714 aaKnown RBP3.83□□□□□ -1.8
MSL1YIR009W FAA3P39002 694 aa3.83□□□□□ -1.8
MSL1YIR009W YNR063WP53749 607 aa3.83□□□□□ -1.8
MSL1YIR009W MRPL22P53881 309 aa3.83□□□□□ -1.8
MSL1YIR009W SRO9P25567 434 aaKnown RBP3.82□□□□□ -1.8
MSL1YIR009W ETP1P38748 585 aaKnown RBP3.82□□□□□ -1.8
MSL1YIR009W TAF1P46677 1066 aa3.82□□□□□ -1.8
MSL1YIR009W AFG2P32794 780 aa3.81□□□□□ -1.8
MSL1YIR009W RPT1P33299 467 aaKnown RBP3.81□□□□□ -1.8
MSL1YIR009W YKL222CP35995 705 aa3.81□□□□□ -1.8
MSL1YIR009W AIM3P38266 947 aaKnown RBP3.81□□□□□ -1.8
MSL1YIR009W PIC2P40035 300 aa3.81□□□□□ -1.8
MSL1YIR009W THI12P42883 340 aa3.81□□□□□ -1.8
MSL1YIR009W THI5P43534 340 aa3.81□□□□□ -1.8
MSL1YIR009W VPS53P47061 822 aa3.81□□□□□ -1.8
MSL1YIR009W THI11P47183 340 aa3.81□□□□□ -1.8
MSL1YIR009W EST2Q06163 884 aa3.81□□□□□ -1.8
MSL1YIR009W THI13Q07748 340 aa3.81□□□□□ -1.8
MSL1YIR009W SEC20P28791 383 aa3.8□□□□□ -1.8
MSL1YIR009W YSC84P32793 468 aa3.8□□□□□ -1.8
MSL1YIR009W FLR1P38124 548 aa3.8□□□□□ -1.8
MSL1YIR009W IPL1P38991 367 aa3.8□□□□□ -1.8
MSL1YIR009W RIM8P53179 542 aa3.8□□□□□ -1.8
MSL1YIR009W AIM26P32858 118 aa3.79□□□□□ -1.8
MSL1YIR009W FOL2P51601 243 aaKnown RBP3.79□□□□□ -1.8
MSL1YIR009W RSC58Q07979 502 aa3.79□□□□□ -1.8
MSL1YIR009W RCL1Q08096 367 aaPredicted RBP3.79□□□□□ -1.8
MSL1YIR009W SOD2P00447 233 aa3.78□□□□□ -1.8
MSL1YIR009W KIP1P28742 1111 aa3.78□□□□□ -1.8
MSL1YIR009W GIP4P39732 760 aa3.78□□□□□ -1.8
MSL1YIR009W SNO2P53823 222 aa3.78□□□□□ -1.8
MSL1YIR009W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
MSL1YIR009W SEN54Q02825 467 aaPredicted RBP3.78□□□□□ -1.8
MSL1YIR009W TAF13P11747 167 aa3.77□□□□□ -1.81
MSL1YIR009W BAP2P38084 609 aa3.77□□□□□ -1.81
MSL1YIR009W GPB2P39717 880 aa3.77□□□□□ -1.81
MSL1YIR009W YGR122WP53272 402 aa3.77□□□□□ -1.81
MSL1YIR009W NBA1Q08229 501 aaKnown RBP3.77□□□□□ -1.81
MSL1YIR009W YPL277CQ08989 487 aa3.77□□□□□ -1.81
MSL1YIR009W PTC5Q12511 572 aa3.77□□□□□ -1.81
MSL1YIR009W COQ4O13525 335 aa3.76□□□□□ -1.81
MSL1YIR009W RPS13P05756 151 aaKnown RBP3.76□□□□□ -1.81
MSL1YIR009W DED1P06634 604 aaKnown RBP3.76□□□□□ -1.81
MSL1YIR009W SPS1P08458 490 aa3.76□□□□□ -1.81
MSL1YIR009W PRE9P23638 258 aaKnown RBP3.76□□□□□ -1.81
MSL1YIR009W TOD6P34219 525 aa3.76□□□□□ -1.81
MSL1YIR009W ALG3P38179 458 aa3.76□□□□□ -1.81
MSL1YIR009W HOS3Q02959 697 aaKnown RBP3.76□□□□□ -1.81
MSL1YIR009W HDA2Q06629 674 aa3.76□□□□□ -1.81
MSL1YIR009W MCD1Q12158 566 aa3.76□□□□□ -1.81
MSL1YIR009W SNF5P18480 905 aa3.75□□□□□ -1.81
MSL1YIR009W CCZ1P38273 704 aa3.75□□□□□ -1.81
MSL1YIR009W MRPS18P42847 217 aa3.75□□□□□ -1.81
MSL1YIR009W ENV11P53246 860 aa3.75□□□□□ -1.81
MSL1YIR009W TNA1P53322 534 aa3.75□□□□□ -1.81
MSL1YIR009W RAD2P07276 1031 aa3.74□□□□□ -1.81
MSL1YIR009W PIK1P39104 1066 aa3.74□□□□□ -1.81
MSL1YIR009W RPN3P40016 523 aaKnown RBP3.74□□□□□ -1.81
MSL1YIR009W GNP1P48813 663 aa3.74□□□□□ -1.81
MSL1YIR009W SIW14P53965 281 aa3.74□□□□□ -1.81
MSL1YIR009W RAT1Q02792 1006 aaKnown RBP3.74□□□□□ -1.81
MSL1YIR009W ROD1Q02805 837 aa3.74□□□□□ -1.81
MSL1YIR009W YDR132CQ03900 495 aa3.74□□□□□ -1.81
MSL1YIR009W YPL260WQ08977 551 aa3.74□□□□□ -1.81
MSL1YIR009W CYC8P14922 966 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms