RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YGR125WP53273 1036 aa2.59□□□□□ -2
RTT107YHR154W ALR1Q08269 859 aa2.59□□□□□ -2
RTT107YHR154W CYT1P07143 309 aa2.58□□□□□ -2
RTT107YHR154W BOI1P38041 980 aaKnown RBP2.58□□□□□ -2
RTT107YHR154W CIC1P38779 376 aaKnown RBP2.58□□□□□ -2
RTT107YHR154W NOC2P39744 710 aaKnown RBP2.58□□□□□ -2
RTT107YHR154W TYW3P53177 273 aa2.58□□□□□ -2
RTT107YHR154W TMA64Q04600 565 aaKnown RBP2.58□□□□□ -2
RTT107YHR154W THI72Q08579 599 aa2.58□□□□□ -2
RTT107YHR154W MPE1P35728 441 aaKnown RBP2.58□□□□□ -2
RTT107YHR154W UBP12P39538 1254 aa2.58□□□□□ -2
RTT107YHR154W NIT1P40447 199 aa2.58□□□□□ -2
RTT107YHR154W FRA1Q07825 749 aa2.58□□□□□ -2
RTT107YHR154W NOC3Q07896 663 aaPredicted RBP2.58□□□□□ -2
RTT107YHR154W TCB1Q12466 1186 aa2.58□□□□□ -2
RTT107YHR154W MAC1P35192 417 aa2.57□□□□□ -2
RTT107YHR154W HAL5P38970 855 aaKnown RBP2.57□□□□□ -2
RTT107YHR154W MRPS18P42847 217 aa2.57□□□□□ -2
RTT107YHR154W LYS5P50113 272 aa2.57□□□□□ -2
RTT107YHR154W DUS1P53759 423 aaKnown RBP2.57□□□□□ -2
RTT107YHR154W LSO1Q3E827 93 aa2.57□□□□□ -2
RTT107YHR154W DAT1P13483 248 aaKnown RBP2.57□□□□□ -2
RTT107YHR154W PRP5P21372 849 aaPredicted RBP2.57□□□□□ -2
RTT107YHR154W BUD6P41697 788 aa2.57□□□□□ -2
RTT107YHR154W AAD14P42884 376 aa2.57□□□□□ -2
RTT107YHR154W ALO1P54783 526 aaKnown RBP2.57□□□□□ -2
RTT107YHR154W UFD2P54860 961 aa2.57□□□□□ -2
RTT107YHR154W DAL4Q04895 635 aa2.57□□□□□ -2
RTT107YHR154W GPI13Q07830 1017 aa2.57□□□□□ -2
RTT107YHR154W MNR2P35724 969 aa2.57□□□□□ -2
RTT107YHR154W TAF5P38129 798 aa2.57□□□□□ -2
RTT107YHR154W FUI1P38196 639 aa2.57□□□□□ -2
RTT107YHR154W HDA3Q06623 655 aa2.57□□□□□ -2
RTT107YHR154W RAD2P07276 1031 aa2.56□□□□□ -2
RTT107YHR154W ERR1P0CX10 437 aa2.56□□□□□ -2
RTT107YHR154W ERR2P0CX11 437 aa2.56□□□□□ -2
RTT107YHR154W CYC8P14922 966 aa2.56□□□□□ -2
RTT107YHR154W ARE1P25628 610 aa2.56□□□□□ -2
RTT107YHR154W YJR098CP47139 656 aa2.56□□□□□ -2
RTT107YHR154W CEF1Q03654 590 aaPredicted RBP2.56□□□□□ -2
RTT107YHR154W TY1A-MR1Q04215 440 aa2.56□□□□□ -2
RTT107YHR154W OPI10Q08202 246 aa2.56□□□□□ -2
RTT107YHR154W FLC1Q08967 793 aa2.56□□□□□ -2
RTT107YHR154W THS1P04801 734 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W RPS6AP0CX37 236 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W RPS6BP0CX38 236 aaPredicted RBP2.56□□□□□ -2
RTT107YHR154W RPN12P32496 274 aa2.56□□□□□ -2
RTT107YHR154W MRT4P33201 236 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W VPS35P34110 944 aa2.56□□□□□ -2
RTT107YHR154W ECM2P38241 364 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W RPT2P40327 437 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W CCT8P47079 568 aaKnown RBP2.56□□□□□ -2
RTT107YHR154W YGR122WP53272 402 aa2.56□□□□□ -2
RTT107YHR154W SPO20Q04359 397 aa2.56□□□□□ -2
RTT107YHR154W SPO75Q07798 868 aa2.56□□□□□ -2
RTT107YHR154W CTT1P06115 562 aa2.55□□□□□ -2
RTT107YHR154W DPB3P27344 201 aa2.55□□□□□ -2
RTT107YHR154W SAP155P43612 1002 aa2.55□□□□□ -2
RTT107YHR154W COG4Q06096 861 aa2.55□□□□□ -2
RTT107YHR154W NOP14Q99207 810 aaKnown RBP2.55□□□□□ -2
RTT107YHR154W RPS9BP05755 195 aaKnown RBP2.55□□□□□ -2
RTT107YHR154W TBS1P38114 1094 aa2.55□□□□□ -2
RTT107YHR154W YBR197CP38306 217 aa2.55□□□□□ -2
RTT107YHR154W FAA3P39002 694 aa2.55□□□□□ -2
RTT107YHR154W CHZ1P40019 153 aaPredicted RBP2.55□□□□□ -2
RTT107YHR154W ATG16Q03818 150 aa2.55□□□□□ -2
RTT107YHR154W TMA17Q12513 150 aa2.55□□□□□ -2
RTT107YHR154W INH1P01097 85 aa2.55□□□□□ -2
RTT107YHR154W AI1P03875 834 aa2.55□□□□□ -2
RTT107YHR154W OSH7P38755 437 aa2.55□□□□□ -2
RTT107YHR154W IES1P43579 692 aa2.55□□□□□ -2
RTT107YHR154W RPA14P50106 137 aa2.55□□□□□ -2
RTT107YHR154W SND1Q04007 877 aa2.55□□□□□ -2
RTT107YHR154W REC8Q12188 680 aa2.55□□□□□ -2
RTT107YHR154W TMA7Q3E764 64 aaKnown RBP2.55□□□□□ -2
RTT107YHR154W MHP1P43638 1398 aa2.54□□□□□ -2
RTT107YHR154W CCP1P00431 361 aa2.54□□□□□ -2
RTT107YHR154W YAP1801P38856 637 aa2.54□□□□□ -2
RTT107YHR154W GEM1P39722 662 aa2.54□□□□□ -2
RTT107YHR154W RSP5P39940 809 aaKnown RBP2.54□□□□□ -2
RTT107YHR154W HUL4P40985 892 aa2.54□□□□□ -2
RTT107YHR154W JJJ3P47138 172 aa2.54□□□□□ -2
RTT107YHR154W YGR237CP50089 785 aa2.54□□□□□ -2
RTT107YHR154W ITC1P53125 1264 aa2.54□□□□□ -2
RTT107YHR154W UTP13Q05946 817 aaKnown RBP2.54□□□□□ -2
RTT107YHR154W MRL1Q06815 381 aa2.54□□□□□ -2
RTT107YHR154W ATG20Q07528 640 aa2.54□□□□□ -2
RTT107YHR154W SLX4Q12098 748 aa2.54□□□□□ -2
RTT107YHR154W YLL066CQ99208 1374 aa2.54□□□□□ -2
RTT107YHR154W APC1P53886 1748 aa2.54□□□□□ -2
RTT107YHR154W SUV3P32580 737 aa2.54□□□□□ -2
RTT107YHR154W YKL069WP36088 180 aa2.54□□□□□ -2
RTT107YHR154W YKR075CP36155 307 aa2.54□□□□□ -2
RTT107YHR154W VPS27P40343 622 aaKnown RBP2.54□□□□□ -2
RTT107YHR154W YNL011CP53980 444 aa2.54□□□□□ -2
RTT107YHR154W TFB2Q02939 513 aa2.54□□□□□ -2
RTT107YHR154W BRE1Q07457 700 aaKnown RBP2.54□□□□□ -2
RTT107YHR154W FAP7Q12055 197 aaPredicted RBP2.54□□□□□ -2
RTT107YHR154W HSP60P19882 572 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W UTR2P32623 467 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 103.5 ms