RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C VMA4P22203 233 aaKnown RBP7.52□□□□□ -1.2
NEM1YHR004C MSH3P25336 1018 aa7.52□□□□□ -1.2
NEM1YHR004C FLR1P38124 548 aa7.52□□□□□ -1.2
NEM1YHR004C SNO2P53823 222 aa7.52□□□□□ -1.2
NEM1YHR004C YDL177CQ12257 170 aa7.52□□□□□ -1.2
NEM1YHR004C SOD2P00447 233 aa7.52□□□□□ -1.21
NEM1YHR004C SAM35P14693 329 aa7.52□□□□□ -1.21
NEM1YHR004C KAR2P16474 682 aaKnown RBP7.52□□□□□ -1.21
NEM1YHR004C PEX13P80667 386 aa7.52□□□□□ -1.21
NEM1YHR004C RSA3Q05942 220 aaKnown RBP7.52□□□□□ -1.21
NEM1YHR004C SRO9P25567 434 aaKnown RBP7.51□□□□□ -1.21
NEM1YHR004C XKS1P42826 600 aa7.51□□□□□ -1.21
NEM1YHR004C HAT1Q12341 374 aa7.51□□□□□ -1.21
NEM1YHR004C GCD6P32501 712 aaKnown RBP7.5□□□□□ -1.21
NEM1YHR004C RSM26P47141 266 aa7.5□□□□□ -1.21
NEM1YHR004C SQT1P35184 431 aa7.49□□□□□ -1.21
NEM1YHR004C NMD3P38861 518 aaKnown RBP7.49□□□□□ -1.21
NEM1YHR004C ENV11P53246 860 aa7.49□□□□□ -1.21
NEM1YHR004C NBA1Q08229 501 aaKnown RBP7.49□□□□□ -1.21
NEM1YHR004C AIM26P32858 118 aa7.48□□□□□ -1.21
NEM1YHR004C TOD6P34219 525 aa7.48□□□□□ -1.21
NEM1YHR004C GEF1P37020 779 aa7.48□□□□□ -1.21
NEM1YHR004C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
NEM1YHR004C RPS13P05756 151 aaKnown RBP7.47□□□□□ -1.21
NEM1YHR004C PRP40P33203 583 aaKnown RBP7.47□□□□□ -1.21
NEM1YHR004C VPS35P34110 944 aa7.47□□□□□ -1.21
NEM1YHR004C VPS53P47061 822 aa7.47□□□□□ -1.21
NEM1YHR004C YNR063WP53749 607 aa7.47□□□□□ -1.21
NEM1YHR004C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
NEM1YHR004C RKM2Q03942 479 aa7.46□□□□□ -1.22
NEM1YHR004C YOR352WQ08816 343 aa7.46□□□□□ -1.22
NEM1YHR004C YPL277CQ08989 487 aa7.46□□□□□ -1.22
NEM1YHR004C QNS1P38795 714 aaKnown RBP7.45□□□□□ -1.22
NEM1YHR004C YJL045WP47052 634 aa7.44□□□□□ -1.22
NEM1YHR004C YLR358CO13565 187 aa7.43□□□□□ -1.22
NEM1YHR004C ADD66P36040 267 aa7.43□□□□□ -1.22
NEM1YHR004C ULP1Q02724 621 aa7.43□□□□□ -1.22
NEM1YHR004C GSF2Q04697 403 aaKnown RBP7.43□□□□□ -1.22
NEM1YHR004C OXR1Q08952 273 aa7.43□□□□□ -1.22
NEM1YHR004C SPS1P08458 490 aa7.42□□□□□ -1.22
NEM1YHR004C PEX28P38848 579 aa7.42□□□□□ -1.22
NEM1YHR004C DAL4Q04895 635 aa7.42□□□□□ -1.22
NEM1YHR004C RSC58Q07979 502 aa7.42□□□□□ -1.22
NEM1YHR004C YSC84P32793 468 aa7.41□□□□□ -1.22
NEM1YHR004C YHL050CP38721 697 aa7.4□□□□□ -1.22
NEM1YHR004C YHR219WP38900 624 aa7.4□□□□□ -1.22
NEM1YHR004C COQ4O13525 335 aa7.39□□□□□ -1.23
NEM1YHR004C PHO4P07270 312 aaKnown RBP7.39□□□□□ -1.23
NEM1YHR004C CCZ1P38273 704 aa7.39□□□□□ -1.23
NEM1YHR004C UGA4P32837 571 aa7.38□□□□□ -1.23
NEM1YHR004C HNT2P49775 206 aa7.38□□□□□ -1.23
NEM1YHR004C RDH54P38086 958 aa7.37□□□□□ -1.23
NEM1YHR004C CLU1Q03690 1277 aaKnown RBP7.37□□□□□ -1.23
NEM1YHR004C ADI1Q03677 179 aa7.36□□□□□ -1.23
NEM1YHR004C PRE10P21242 288 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
NEM1YHR004C YGL140CP53120 1219 aa7.35□□□□□ -1.23
NEM1YHR004C EST2Q06163 884 aa7.35□□□□□ -1.23
NEM1YHR004C SGD1Q06132 899 aa7.34□□□□□ -1.23
NEM1YHR004C RSB1Q08417 382 aa7.34□□□□□ -1.23
NEM1YHR004C DAK2P43550 591 aa7.33□□□□□ -1.24
NEM1YHR004C HOS3Q02959 697 aaKnown RBP7.33□□□□□ -1.24
NEM1YHR004C KIP1P28742 1111 aa7.32□□□□□ -1.24
NEM1YHR004C ABZ1P37254 787 aaPredicted RBP7.32□□□□□ -1.24
NEM1YHR004C SHM2P37291 469 aaKnown RBP7.32□□□□□ -1.24
NEM1YHR004C SEC26P41810 973 aaKnown RBP7.32□□□□□ -1.24
NEM1YHR004C TNA1P53322 534 aa7.32□□□□□ -1.24
NEM1YHR004C PTC5Q12511 572 aa7.32□□□□□ -1.24
NEM1YHR004C PPX1P38698 397 aa7.31□□□□□ -1.24
NEM1YHR004C LAM1P38851 1228 aa7.31□□□□□ -1.24
NEM1YHR004C STM1P39015 273 aaKnown RBP7.31□□□□□ -1.24
NEM1YHR004C SPT20P50875 604 aa7.31□□□□□ -1.24
NEM1YHR004C TUB2P02557 457 aaKnown RBP7.3□□□□□ -1.24
NEM1YHR004C BAP2P38084 609 aa7.3□□□□□ -1.24
NEM1YHR004C YPL109CQ02981 657 aa7.3□□□□□ -1.24
NEM1YHR004C TAF13P11747 167 aa7.29□□□□□ -1.24
NEM1YHR004C SEC23P15303 768 aaKnown RBP7.29□□□□□ -1.24
NEM1YHR004C TAT2P38967 592 aa7.29□□□□□ -1.24
NEM1YHR004C MEF2P39677 819 aa7.29□□□□□ -1.24
NEM1YHR004C YDR132CQ03900 495 aa7.29□□□□□ -1.24
NEM1YHR004C PUF4P25339 888 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
NEM1YHR004C MET4P32389 672 aa7.28□□□□□ -1.24
NEM1YHR004C MPT5P39016 859 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
NEM1YHR004C PIK1P39104 1066 aa7.28□□□□□ -1.24
NEM1YHR004C GCN5Q03330 439 aa7.28□□□□□ -1.24
NEM1YHR004C RCL1Q08096 367 aaPredicted RBP7.28□□□□□ -1.24
NEM1YHR004C CTS1P29029 562 aa7.27□□□□□ -1.24
NEM1YHR004C YPL260WQ08977 551 aa7.27□□□□□ -1.24
NEM1YHR004C CYC1P00044 109 aaPredicted RBP7.27□□□□□ -1.25
NEM1YHR004C RPN3P40016 523 aaKnown RBP7.27□□□□□ -1.25
NEM1YHR004C MSC6Q08818 692 aaKnown RBP7.27□□□□□ -1.25
NEM1YHR004C HEM13P11353 328 aaKnown RBP7.26□□□□□ -1.25
NEM1YHR004C AFG2P32794 780 aa7.26□□□□□ -1.25
NEM1YHR004C GPB2P39717 880 aa7.26□□□□□ -1.25
NEM1YHR004C THI12P42883 340 aa7.26□□□□□ -1.25
NEM1YHR004C THI5P43534 340 aa7.26□□□□□ -1.25
NEM1YHR004C THI11P47183 340 aa7.26□□□□□ -1.25
NEM1YHR004C GIS1Q03833 894 aa7.26□□□□□ -1.25
NEM1YHR004C THI13Q07748 340 aa7.26□□□□□ -1.25
NEM1YHR004C ALG3P38179 458 aa7.25□□□□□ -1.25
NEM1YHR004C SSF1P38789 453 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms