RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PDC1P06169 563 aaKnown RBP15.38■□□□□ 0.05
SHU1YHL006C MCM4P30665 933 aaKnown RBP15.38■□□□□ 0.05
SHU1YHL006C CTR1P49573 406 aa15.38■□□□□ 0.05
SHU1YHL006C FMS1P50264 508 aa15.38■□□□□ 0.05
SHU1YHL006C GCR2Q01722 534 aa15.38■□□□□ 0.05
SHU1YHL006C WHI3P34761 661 aaKnown RBP15.37■□□□□ 0.05
SHU1YHL006C REG2P38232 338 aa15.37■□□□□ 0.05
SHU1YHL006C HXT13P39924 564 aa15.37■□□□□ 0.05
SHU1YHL006C YOR111WQ99210 232 aa15.37■□□□□ 0.05
SHU1YHL006C POX1P13711 748 aa15.36■□□□□ 0.05
SHU1YHL006C TPM1P17536 199 aaKnown RBP15.36■□□□□ 0.05
SHU1YHL006C TFC4P33339 1025 aa15.36■□□□□ 0.05
SHU1YHL006C YFL040WP43562 540 aa15.36■□□□□ 0.05
SHU1YHL006C VPS53P47061 822 aa15.36■□□□□ 0.05
SHU1YHL006C FMP30Q02883 468 aa15.36■□□□□ 0.05
SHU1YHL006C ESF1Q06344 628 aaKnown RBP15.36■□□□□ 0.05
SHU1YHL006C DSE3Q08729 430 aa15.36■□□□□ 0.05
SHU1YHL006C ALG2P43636 503 aa15.35■□□□□ 0.05
SHU1YHL006C YVH1Q02256 364 aaKnown RBP15.35■□□□□ 0.05
SHU1YHL006C ISA1Q07821 250 aaPredicted RBP15.35■□□□□ 0.05
SHU1YHL006C TRM11Q12463 433 aa15.35■□□□□ 0.05
SHU1YHL006C LIF1P53150 421 aa15.34■□□□□ 0.05
SHU1YHL006C YLR326WQ06170 240 aaKnown RBP15.34■□□□□ 0.05
SHU1YHL006C MIP1P15801 1254 aa15.32■□□□□ 0.04
SHU1YHL006C SEC8P32855 1065 aa15.32■□□□□ 0.04
SHU1YHL006C UGA4P32837 571 aa15.31■□□□□ 0.04
SHU1YHL006C DAK1P54838 584 aaKnown RBP15.31■□□□□ 0.04
SHU1YHL006C VIP1Q06685 1146 aaKnown RBP15.31■□□□□ 0.04
SHU1YHL006C RPL8AP17076 256 aaKnown RBP15.3■□□□□ 0.04
SHU1YHL006C RNR3P21672 869 aaKnown RBP15.3■□□□□ 0.04
SHU1YHL006C SEC20P28791 383 aa15.3■□□□□ 0.04
SHU1YHL006C DLD1P32891 587 aa15.3■□□□□ 0.04
SHU1YHL006C ASE1P50275 885 aa15.3■□□□□ 0.04
SHU1YHL006C PTA1Q01329 785 aaPredicted RBP15.3■□□□□ 0.04
SHU1YHL006C TIM23P32897 222 aa15.29■□□□□ 0.04
SHU1YHL006C ECM23Q02710 187 aa15.29■□□□□ 0.04
SHU1YHL006C YDR524C-BQ3E6R4 66 aa15.29■□□□□ 0.04
SHU1YHL006C TY1B-AO13527 1196 aaKnown RBP15.28■□□□□ 0.04
SHU1YHL006C HIP1P06775 603 aa15.28■□□□□ 0.04
SHU1YHL006C FLR1P38124 548 aa15.28■□□□□ 0.04
SHU1YHL006C TPM2P40414 161 aa15.28■□□□□ 0.04
SHU1YHL006C EAR1Q03212 550 aa15.28■□□□□ 0.04
SHU1YHL006C GPT2P36148 743 aa15.27■□□□□ 0.04
SHU1YHL006C AKR1P39010 764 aa15.27■□□□□ 0.04
SHU1YHL006C AIM9P40053 627 aaKnown RBP15.27■□□□□ 0.04
SHU1YHL006C RTP1Q12751 981 aa15.27■□□□□ 0.04
SHU1YHL006C PAN5P38787 379 aa15.26■□□□□ 0.03
SHU1YHL006C YPR117WQ06116 2489 aa15.26■□□□□ 0.03
SHU1YHL006C CIT1P00890 479 aa15.25■□□□□ 0.03
SHU1YHL006C MAS2P11914 482 aa15.25■□□□□ 0.03
SHU1YHL006C PWP2P25635 923 aaKnown RBP15.25■□□□□ 0.03
SHU1YHL006C AVT3P36062 692 aa15.25■□□□□ 0.03
SHU1YHL006C VID28P40547 921 aa15.25■□□□□ 0.03
SHU1YHL006C LDB19Q12502 818 aa15.25■□□□□ 0.03
SHU1YHL006C MOT1P32333 1867 aa15.25■□□□□ 0.03
SHU1YHL006C STI1P15705 589 aaKnown RBP RIP-Chip data15.24■□□□□ 0.03not detected
SHU1YHL006C RPS7BP48164 190 aaKnown RBP15.24■□□□□ 0.03
SHU1YHL006C YDR341CQ05506 607 aaKnown RBP15.24■□□□□ 0.03
SHU1YHL006C OXR1Q08952 273 aa15.24■□□□□ 0.03
SHU1YHL006C MET6P05694 767 aaKnown RBP15.23■□□□□ 0.03
SHU1YHL006C HEM1P09950 548 aaPredicted RBP15.23■□□□□ 0.03
SHU1YHL006C SPO22P40511 975 aa15.23■□□□□ 0.03
SHU1YHL006C GRS1P38088 690 aaKnown RBP15.22■□□□□ 0.03
SHU1YHL006C KRI1P42846 591 aaKnown RBP15.22■□□□□ 0.03
SHU1YHL006C VPS72Q03388 795 aa15.22■□□□□ 0.03
SHU1YHL006C FBP26P32604 452 aa15.21■□□□□ 0.03
SHU1YHL006C SUL1P38359 859 aa15.21■□□□□ 0.03
SHU1YHL006C UBP15P50101 1230 aa15.21■□□□□ 0.03
SHU1YHL006C AHC1Q12433 566 aa15.21■□□□□ 0.03
SHU1YHL006C ARP6Q12509 438 aa15.21■□□□□ 0.03
SHU1YHL006C WHI4Q07655 649 aaKnown RBP15.2■□□□□ 0.02
SHU1YHL006C TRL1P09880 827 aaKnown RBP15.19■□□□□ 0.02
SHU1YHL006C SIS2P36024 562 aa15.19■□□□□ 0.02
SHU1YHL006C CCT3P39077 534 aaKnown RBP15.19■□□□□ 0.02
SHU1YHL006C EPL1P43572 832 aa15.19■□□□□ 0.02
SHU1YHL006C SNA3P14359 133 aa15.18■□□□□ 0.02
SHU1YHL006C PCI8P40512 444 aa15.18■□□□□ 0.02
SHU1YHL006C MSC2Q03455 724 aa15.18■□□□□ 0.02
SHU1YHL006C YLL058WQ12198 575 aa15.18■□□□□ 0.02
SHU1YHL006C ATG11Q12527 1178 aa15.18■□□□□ 0.02
SHU1YHL006C UBR2Q07963 1872 aa15.18■□□□□ 0.02
SHU1YHL006C RXT2P38255 430 aa15.17■□□□□ 0.02
SHU1YHL006C SES1P07284 462 aaKnown RBP15.16■□□□□ 0.02
SHU1YHL006C POT1P27796 417 aaKnown RBP RIP-Chip data15.16■□□□□ 0.02not detected
SHU1YHL006C DUR3P33413 735 aa15.16■□□□□ 0.02
SHU1YHL006C MSC7P38694 644 aa15.16■□□□□ 0.02
SHU1YHL006C ORC4P54791 529 aa15.16■□□□□ 0.02
SHU1YHL006C HCA4P20448 770 aaKnown RBP15.15■□□□□ 0.02
SHU1YHL006C SWI4P25302 1093 aaKnown RBP15.15■□□□□ 0.02
SHU1YHL006C UBP11P36026 717 aa15.15■□□□□ 0.02
SHU1YHL006C AZR1P50080 613 aa15.15■□□□□ 0.02
SHU1YHL006C GIS4Q04233 774 aa15.15■□□□□ 0.02
SHU1YHL006C SMD2Q06217 110 aaKnown RBP15.15■□□□□ 0.02
SHU1YHL006C MAK11P20484 414 aaKnown RBP15.14■□□□□ 0.01
SHU1YHL006C KIN82P25341 720 aa15.14■□□□□ 0.01
SHU1YHL006C BMH2P34730 273 aaKnown RBP15.14■□□□□ 0.01
SHU1YHL006C SGM1P47166 707 aa15.14■□□□□ 0.01
SHU1YHL006C YNL115CP53925 644 aa15.14■□□□□ 0.01
SHU1YHL006C ARP5P53946 755 aa15.14■□□□□ 0.01
SHU1YHL006C MATALPHA2P0CY08 210 aa15.13■□□□□ 0.01
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms