RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C PRK1P40494 810 aa3.68□□□□□ -1.82
CDH1YGL003C YJL049WP47048 450 aa3.68□□□□□ -1.82
CDH1YGL003C RSM26P47141 266 aa3.68□□□□□ -1.82
CDH1YGL003C LYS5P50113 272 aa3.68□□□□□ -1.82
CDH1YGL003C CWC24P53769 259 aa3.68□□□□□ -1.82
CDH1YGL003C NOG1Q02892 647 aaKnown RBP3.68□□□□□ -1.82
CDH1YGL003C PKH1Q03407 766 aa3.68□□□□□ -1.82
CDH1YGL003C IMH1Q06704 911 aaKnown RBP3.68□□□□□ -1.82
CDH1YGL003C SOG2Q08817 791 aa3.68□□□□□ -1.82
CDH1YGL003C IKI3Q06706 1349 aaKnown RBP3.68□□□□□ -1.82
CDH1YGL003C TOP2P06786 1428 aaKnown RBP3.68□□□□□ -1.82
CDH1YGL003C HVG1P0CE11 249 aa3.67□□□□□ -1.82
CDH1YGL003C CDC11P32458 415 aa3.67□□□□□ -1.82
CDH1YGL003C NFU1P32860 256 aa3.67□□□□□ -1.82
CDH1YGL003C VPS24P36095 224 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C MUM2P38236 366 aa3.67□□□□□ -1.82
CDH1YGL003C AMN1P38285 549 aaPredicted RBP3.67□□□□□ -1.82
CDH1YGL003C RIX1P38883 763 aaPredicted RBP3.67□□□□□ -1.82
CDH1YGL003C YJL181WP46987 611 aa3.67□□□□□ -1.82
CDH1YGL003C ALG12P53730 551 aa3.67□□□□□ -1.82
CDH1YGL003C ADE12P80210 433 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C NSE3Q05541 303 aa3.67□□□□□ -1.82
CDH1YGL003C SYT1Q06836 1226 aa3.67□□□□□ -1.82
CDH1YGL003C RTT10Q08924 1013 aa3.67□□□□□ -1.82
CDH1YGL003C BUD4P47136 1447 aa3.67□□□□□ -1.82
CDH1YGL003C THO2P53552 1597 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C SEC23P15303 768 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C GRX4P32642 244 aa3.67□□□□□ -1.82
CDH1YGL003C TFA2P36145 328 aa3.67□□□□□ -1.82
CDH1YGL003C PEX28P38848 579 aa3.67□□□□□ -1.82
CDH1YGL003C FAF1P40546 346 aaPredicted RBP3.67□□□□□ -1.82
CDH1YGL003C YIR007WP40566 764 aa3.67□□□□□ -1.82
CDH1YGL003C LEM3P42838 414 aa3.67□□□□□ -1.82
CDH1YGL003C GUP1P53154 560 aa3.67□□□□□ -1.82
CDH1YGL003C VMS1Q04311 632 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C TMA46Q12000 345 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C WRS1Q12109 432 aaKnown RBP3.67□□□□□ -1.82
CDH1YGL003C GCR1P07261 785 aa3.66□□□□□ -1.82
CDH1YGL003C RAD27P26793 382 aa3.66□□□□□ -1.82
CDH1YGL003C DUT1P33317 147 aa3.66□□□□□ -1.82
CDH1YGL003C YKL091CP33324 310 aaKnown RBP3.66□□□□□ -1.82
CDH1YGL003C MAL31P38156 614 aa3.66□□□□□ -1.82
CDH1YGL003C FUN12P39730 1002 aaKnown RBP3.66□□□□□ -1.82
CDH1YGL003C SNF7P39929 240 aaKnown RBP3.66□□□□□ -1.82
CDH1YGL003C FET4P40988 552 aa3.66□□□□□ -1.82
CDH1YGL003C BUD6P41697 788 aa3.66□□□□□ -1.82
CDH1YGL003C SEC27P41811 889 aaKnown RBP3.66□□□□□ -1.82
CDH1YGL003C YJR124CP47159 448 aa3.66□□□□□ -1.82
CDH1YGL003C ENT3P47160 408 aa3.66□□□□□ -1.82
CDH1YGL003C YGL140CP53120 1219 aa3.66□□□□□ -1.82
CDH1YGL003C SRB8P25648 1427 aa3.66□□□□□ -1.82
CDH1YGL003C THS1P04801 734 aaKnown RBP3.65□□□□□ -1.82
CDH1YGL003C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
CDH1YGL003C GRX7P38068 203 aa3.65□□□□□ -1.82
CDH1YGL003C PAF1P38351 445 aa3.65□□□□□ -1.82
CDH1YGL003C XKS1P42826 600 aa3.65□□□□□ -1.82
CDH1YGL003C HOS2P53096 452 aaPredicted RBP3.65□□□□□ -1.82
CDH1YGL003C GDE1Q02979 1223 aa3.65□□□□□ -1.82
CDH1YGL003C RPN4Q03465 531 aa3.65□□□□□ -1.82
CDH1YGL003C YDR341CQ05506 607 aaKnown RBP3.65□□□□□ -1.82
CDH1YGL003C MRL1Q06815 381 aa3.65□□□□□ -1.82
CDH1YGL003C SNU66Q12420 587 aaPredicted RBP3.65□□□□□ -1.82
CDH1YGL003C NOP58Q12499 511 aaKnown RBP3.65□□□□□ -1.82
CDH1YGL003C TY1B-AO13527 1196 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C MRP10O75012 95 aa3.64□□□□□ -1.83
CDH1YGL003C MSH3P25336 1018 aa3.64□□□□□ -1.83
CDH1YGL003C SEC6P32844 805 aa3.64□□□□□ -1.83
CDH1YGL003C TFC3P34111 1160 aa3.64□□□□□ -1.83
CDH1YGL003C YKL077WP36081 392 aa3.64□□□□□ -1.83
CDH1YGL003C EXO5P38289 585 aa3.64□□□□□ -1.83
CDH1YGL003C LSB6P42951 607 aa3.64□□□□□ -1.83
CDH1YGL003C FAA4P47912 694 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C GNP1P48813 663 aa3.64□□□□□ -1.83
CDH1YGL003C YGR053CP53234 283 aa3.64□□□□□ -1.83
CDH1YGL003C YNR065CP53751 1116 aa3.64□□□□□ -1.83
CDH1YGL003C PEX13P80667 386 aa3.64□□□□□ -1.83
CDH1YGL003C MDM1Q01846 1127 aa3.64□□□□□ -1.83
CDH1YGL003C YLR257WQ06146 321 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C YGR161W-CQ3E744 92 aa3.64□□□□□ -1.83
CDH1YGL003C MYO4P32492 1471 aa3.64□□□□□ -1.83
CDH1YGL003C HTS1P07263 546 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C KNS1P32350 737 aaPredicted RBP3.64□□□□□ -1.83
CDH1YGL003C SWI3P32591 825 aa3.64□□□□□ -1.83
CDH1YGL003C RDH54P38086 958 aa3.64□□□□□ -1.83
CDH1YGL003C FUI1P38196 639 aa3.64□□□□□ -1.83
CDH1YGL003C DJP1P40564 432 aa3.64□□□□□ -1.83
CDH1YGL003C CAF120P53836 1060 aa3.64□□□□□ -1.83
CDH1YGL003C SIW14P53965 281 aa3.64□□□□□ -1.83
CDH1YGL003C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83 RIP-Chip
CDH1YGL003C PRP3Q03338 469 aaPredicted RBP3.64□□□□□ -1.83
CDH1YGL003C HAS1Q03532 505 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C UTP14Q04500 899 aaKnown RBP3.64□□□□□ -1.83
CDH1YGL003C SLP1Q12232 587 aa3.64□□□□□ -1.83
CDH1YGL003C NUP170P38181 1502 aa3.63□□□□□ -1.83
CDH1YGL003C MMS1Q06211 1407 aa3.63□□□□□ -1.83
CDH1YGL003C PDC5P16467 563 aaKnown RBP3.63□□□□□ -1.83
CDH1YGL003C TRX2P22803 104 aaKnown RBP3.63□□□□□ -1.83
CDH1YGL003C SPC110P32380 944 aa3.63□□□□□ -1.83
CDH1YGL003C ARL1P38116 183 aaKnown RBP3.63□□□□□ -1.83
CDH1YGL003C NEO1P40527 1151 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 137.1 ms