RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHD1	YER164W	SYF1	Q04048	859 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD1	YER164W	UTP5	Q04177	643 aa	Known RBP	4.12	□□□□□ -1.75
CHD1	YER164W	YLR407W	Q06070	228 aa		4.12	□□□□□ -1.75
CHD1	YER164W	EST2	Q06163	884 aa		4.12	□□□□□ -1.75
CHD1	YER164W	YVC1	Q12324	675 aa		4.12	□□□□□ -1.75
CHD1	YER164W	HXK1	P04806	485 aa	Known RBP	4.11	□□□□□ -1.75
CHD1	YER164W	GAP1	P19145	602 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1	YER164W	RPS7A	P26786	190 aa	Known RBP	4.11	□□□□□ -1.75
CHD1	YER164W	ICL1	P28240	557 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1	YER164W	MRE11	P32829	692 aa		4.11	□□□□□ -1.75
CHD1	YER164W	SMC1	P32908	1225 aa		4.11	□□□□□ -1.75
CHD1	YER164W	DMA1	P38823	416 aa		4.11	□□□□□ -1.75
CHD1	YER164W	LAM1	P38851	1228 aa		4.11	□□□□□ -1.75
CHD1	YER164W	MPH1	P40562	993 aa		4.11	□□□□□ -1.75
CHD1	YER164W	GIS4	Q04233	774 aa		4.11	□□□□□ -1.75
CHD1	YER164W	YPL225W	Q08971	146 aa	Known RBP	4.11	□□□□□ -1.75
CHD1	YER164W	DCS2	Q12123	353 aa		4.11	□□□□□ -1.75
CHD1	YER164W	TAH18	Q12181	623 aa		4.11	□□□□□ -1.75
CHD1	YER164W	ATE1	P16639	503 aa		4.11	□□□□□ -1.75
CHD1	YER164W	OPI1	P21957	404 aa		4.11	□□□□□ -1.75
CHD1	YER164W	HEM3	P28789	327 aa		4.11	□□□□□ -1.75
CHD1	YER164W	RPC37	P36121	282 aa		4.11	□□□□□ -1.75
CHD1	YER164W	ECM1	P39715	212 aa		4.11	□□□□□ -1.75
CHD1	YER164W	SPO22	P40511	975 aa		4.11	□□□□□ -1.75
CHD1	YER164W	DAS1	P47005	663 aa		4.11	□□□□□ -1.75
CHD1	YER164W	TY4A-J	P47023	414 aa		4.11	□□□□□ -1.75
CHD1	YER164W	GFD1	Q04839	188 aa	Known RBP	4.11	□□□□□ -1.75
CHD1	YER164W	ATG23	Q06671	453 aa		4.11	□□□□□ -1.75
CHD1	YER164W	YMR085W	P0CF18	432 aa		4.11	□□□□□ -1.75
CHD1	YER164W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CHD1	YER164W	RIT1	P23796	513 aa		4.11	□□□□□ -1.75
CHD1	YER164W	RAD5	P32849	1169 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1	YER164W	YPL150W	Q12152	901 aa		4.11	□□□□□ -1.75
CHD1	YER164W	ZRT2	Q12436	422 aa		4.11	□□□□□ -1.75
CHD1	YER164W	FLO11	P08640	1367 aa		4.11	□□□□□ -1.75
CHD1	YER164W	PRI1	P10363	409 aa		4.11	□□□□□ -1.75
CHD1	YER164W	BUD14	P27637	709 aa		4.11	□□□□□ -1.75
CHD1	YER164W	YEL043W	P32618	956 aa		4.11	□□□□□ -1.75
CHD1	YER164W	TFC3	P34111	1160 aa		4.11	□□□□□ -1.75
CHD1	YER164W	BRO1	P48582	844 aa		4.11	□□□□□ -1.75
CHD1	YER164W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
CHD1	YER164W	RPO26	P20435	155 aa		4.1	□□□□□ -1.75
CHD1	YER164W	MRPS28	P21771	286 aa		4.1	□□□□□ -1.75
CHD1	YER164W	SWI4	P25302	1093 aa	Known RBP	4.1	□□□□□ -1.75
CHD1	YER164W	NPL6	P32832	435 aa		4.1	□□□□□ -1.75
CHD1	YER164W	BDF1	P35817	686 aa		4.1	□□□□□ -1.75
CHD1	YER164W	BOI1	P38041	980 aa	Known RBP	4.1	□□□□□ -1.75
CHD1	YER164W	TFG1	P41895	735 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1	YER164W	MRD1	Q06106	887 aa	Known RBP	4.1	□□□□□ -1.75
CHD1	YER164W	TMA16	Q08687	178 aa		4.1	□□□□□ -1.75
CHD1	YER164W	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
CHD1	YER164W	RRP6	Q12149	733 aa	Known RBP	4.1	□□□□□ -1.75
CHD1	YER164W	VID27	P40157	782 aa		4.1	□□□□□ -1.75
CHD1	YER164W	LYS14	P40971	790 aa		4.1	□□□□□ -1.75
CHD1	YER164W	VHS3	Q08438	674 aa		4.1	□□□□□ -1.75
CHD1	YER164W	AFT2	Q08957	416 aa		4.1	□□□□□ -1.75
CHD1	YER164W	YKL068W-A	Q3E826	78 aa		4.1	□□□□□ -1.75
CHD1	YER164W	GCD2	P12754	651 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1	YER164W	UBP1	P25037	809 aa		4.1	□□□□□ -1.75
CHD1	YER164W	DPB3	P27344	201 aa		4.1	□□□□□ -1.75
CHD1	YER164W	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
CHD1	YER164W	LOS1	P33418	1100 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1	YER164W	YFH7	P43591	353 aa		4.1	□□□□□ -1.75
CHD1	YER164W	UTP22	P53254	1237 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1	YER164W	CSC1	Q06538	782 aa		4.1	□□□□□ -1.75
CHD1	YER164W	PSR2	Q07949	397 aa		4.1	□□□□□ -1.75
CHD1	YER164W	SNF3	P10870	884 aa		4.09	□□□□□ -1.75
CHD1	YER164W	URA1	P28272	314 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD1	YER164W	ANP1	P32629	500 aa		4.09	□□□□□ -1.75
CHD1	YER164W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CHD1	YER164W	CRG1	P38892	291 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
CHD1	YER164W	JJJ2	P46997	583 aa		4.09	□□□□□ -1.75
CHD1	YER164W	GTR1	Q00582	310 aa		4.09	□□□□□ -1.75
CHD1	YER164W	RPS15	Q01855	142 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	WAR1	Q03631	944 aa		4.09	□□□□□ -1.75
CHD1	YER164W	SPN1	Q06505	410 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD1	YER164W	IOC2	Q12072	812 aa		4.09	□□□□□ -1.75
CHD1	YER164W	FAS2	P19097	1887 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	DIT2	P21595	489 aa		4.09	□□□□□ -1.75
CHD1	YER164W	SNU71	P53207	620 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	SEC14	P24280	304 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	SPT5	P27692	1063 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	PSY4	P38193	441 aa		4.09	□□□□□ -1.75
CHD1	YER164W	YTA6	P40328	754 aa		4.09	□□□□□ -1.75
CHD1	YER164W	PCI8	P40512	444 aa		4.09	□□□□□ -1.75
CHD1	YER164W	INA22	P40576	216 aa		4.09	□□□□□ -1.75
CHD1	YER164W	TRS85	P46944	698 aa		4.09	□□□□□ -1.75
CHD1	YER164W	LSC2	P53312	427 aa		4.09	□□□□□ -1.75
CHD1	YER164W	COG6	P53959	839 aa		4.09	□□□□□ -1.75
CHD1	YER164W	YMR102C	Q03177	834 aa		4.09	□□□□□ -1.75
CHD1	YER164W	UTP14	Q04500	899 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	CSR1	Q06705	408 aa	Known RBP	4.09	□□□□□ -1.75
CHD1	YER164W	BRR1	Q99177	341 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD1	YER164W	STV1	P37296	890 aa		4.09	□□□□□ -1.76
CHD1	YER164W	OSH3	P38713	996 aa	Known RBP	4.09	□□□□□ -1.76
CHD1	YER164W	YHL017W	P38745	532 aa		4.09	□□□□□ -1.76
CHD1	YER164W	ETP1	P38748	585 aa	Known RBP	4.09	□□□□□ -1.76
CHD1	YER164W	HYR1	P40581	163 aa	Known RBP	4.09	□□□□□ -1.76
CHD1	YER164W	MSN5	P52918	1224 aa		4.09	□□□□□ -1.76
CHD1	YER164W	RCF1	Q03713	159 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms