RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W BOL3P39724 118 aa3.68□□□□□ -1.82
YCK3YER123W SLS1P42900 643 aa3.68□□□□□ -1.82
YCK3YER123W HNT2P49775 206 aa3.68□□□□□ -1.82
YCK3YER123W NBA1Q08229 501 aaKnown RBP3.68□□□□□ -1.82
YCK3YER123W MCM5P29496 775 aaKnown RBP3.68□□□□□ -1.82
YCK3YER123W PMI40P29952 429 aaKnown RBP3.68□□□□□ -1.82
YCK3YER123W AIM21P40563 679 aa3.68□□□□□ -1.82
YCK3YER123W NUT1P53114 1132 aa3.68□□□□□ -1.82
YCK3YER123W RSC58Q07979 502 aa3.68□□□□□ -1.82
YCK3YER123W FLP1P03870 423 aa3.67□□□□□ -1.82
YCK3YER123W EXO5P38289 585 aa3.67□□□□□ -1.82
YCK3YER123W SHU2P38957 223 aa3.67□□□□□ -1.82
YCK3YER123W RSA3Q05942 220 aaKnown RBP3.67□□□□□ -1.82
YCK3YER123W STE11P23561 717 aa3.66□□□□□ -1.82
YCK3YER123W MTR4P47047 1073 aaKnown RBP3.66□□□□□ -1.82
YCK3YER123W MNN10P50108 393 aaKnown RBP3.66□□□□□ -1.82
YCK3YER123W LAP2Q10740 671 aa3.66□□□□□ -1.82
YCK3YER123W NTO1Q12311 748 aa3.66□□□□□ -1.82
YCK3YER123W NEM1P38757 446 aa3.65□□□□□ -1.82
YCK3YER123W RVS167P39743 482 aaKnown RBP3.65□□□□□ -1.82
YCK3YER123W BSC2Q05611 235 aa3.65□□□□□ -1.82
YCK3YER123W CYC1P00044 109 aaPredicted RBP3.64□□□□□ -1.83
YCK3YER123W YJL045WP47052 634 aa3.64□□□□□ -1.83
YCK3YER123W YNL011CP53980 444 aa3.64□□□□□ -1.83
YCK3YER123W ROT1Q03691 256 aa3.64□□□□□ -1.83
YCK3YER123W DUS4Q06063 367 aa3.64□□□□□ -1.83
YCK3YER123W NOB1Q08444 459 aaKnown RBP3.64□□□□□ -1.83
YCK3YER123W CHS7P38843 316 aa3.63□□□□□ -1.83
YCK3YER123W MCM6P53091 1017 aaKnown RBP3.63□□□□□ -1.83
YCK3YER123W SSA4P22202 642 aaKnown RBP3.63□□□□□ -1.83
YCK3YER123W YSC84P32793 468 aa3.63□□□□□ -1.83
YCK3YER123W LST4P34239 828 aa3.62□□□□□ -1.83
YCK3YER123W ATG14P38270 344 aa3.62□□□□□ -1.83
YCK3YER123W SEC26P41810 973 aaKnown RBP3.62□□□□□ -1.83
YCK3YER123W CDC20P26309 610 aa3.61□□□□□ -1.83
YCK3YER123W SNM1P40993 198 aa3.61□□□□□ -1.83
YCK3YER123W PLB2Q03674 706 aa3.61□□□□□ -1.83
YCK3YER123W UTP5Q04177 643 aaKnown RBP3.61□□□□□ -1.83
YCK3YER123W TMA10Q06177 86 aa3.61□□□□□ -1.83
YCK3YER123W RXT3Q07458 294 aa3.61□□□□□ -1.83
YCK3YER123W ACK1Q07622 623 aaPredicted RBP3.61□□□□□ -1.83
YCK3YER123W GLO3P38682 493 aaKnown RBP3.6□□□□□ -1.83
YCK3YER123W COQ4O13525 335 aa3.59□□□□□ -1.83
YCK3YER123W CCZ1P38273 704 aa3.59□□□□□ -1.83
YCK3YER123W QNS1P38795 714 aaKnown RBP3.59□□□□□ -1.83
YCK3YER123W XKS1P42826 600 aa3.59□□□□□ -1.83
YCK3YER123W MON1P53129 644 aa3.59□□□□□ -1.83
YCK3YER123W CDC55Q00362 526 aa3.59□□□□□ -1.83
YCK3YER123W QDR1P40475 563 aa3.59□□□□□ -1.84
YCK3YER123W PHO23P50947 330 aa3.59□□□□□ -1.84
YCK3YER123W NOG1Q02892 647 aaKnown RBP3.59□□□□□ -1.84
YCK3YER123W INP54Q08227 384 aaKnown RBP3.59□□□□□ -1.84
YCK3YER123W PMA1P05030 918 aaKnown RBP3.57□□□□□ -1.84
YCK3YER123W VPS53P47061 822 aa3.57□□□□□ -1.84
YCK3YER123W YNR063WP53749 607 aa3.57□□□□□ -1.84
YCK3YER123W TRS120Q04183 1289 aa3.57□□□□□ -1.84
YCK3YER123W RCL1Q08096 367 aaPredicted RBP3.57□□□□□ -1.84
YCK3YER123W RSB1Q08417 382 aa3.57□□□□□ -1.84
YCK3YER123W GPB1Q08886 897 aa3.57□□□□□ -1.84
YCK3YER123W PBP1P53297 722 aaKnown RBP3.56□□□□□ -1.84
YCK3YER123W KIN4Q01919 800 aa3.56□□□□□ -1.84
YCK3YER123W PPM2Q08282 695 aa3.56□□□□□ -1.84
YCK3YER123W MNL2Q12205 849 aa3.56□□□□□ -1.84
YCK3YER123W GAL10P04397 699 aa3.55□□□□□ -1.84
YCK3YER123W VMA4P22203 233 aaKnown RBP3.55□□□□□ -1.84
YCK3YER123W DEF1P35732 738 aaKnown RBP3.55□□□□□ -1.84
YCK3YER123W RSM24Q03976 319 aa3.55□□□□□ -1.84
YCK3YER123W CDC6P09119 513 aa3.55□□□□□ -1.84
YCK3YER123W MSH3P25336 1018 aa3.55□□□□□ -1.84
YCK3YER123W DCG1P32460 244 aa3.55□□□□□ -1.84
YCK3YER123W BAP2P38084 609 aa3.55□□□□□ -1.84
YCK3YER123W RKM2Q03942 479 aa3.55□□□□□ -1.84
YCK3YER123W CMP2P14747 604 aa3.54□□□□□ -1.84
YCK3YER123W OAR1P35731 278 aa3.54□□□□□ -1.84
YCK3YER123W MSS4P38994 779 aa3.54□□□□□ -1.84
YCK3YER123W TNA1P53322 534 aa3.54□□□□□ -1.84
YCK3YER123W BDF2Q07442 638 aa3.54□□□□□ -1.84
YCK3YER123W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84 RIP-Chip
YCK3YER123W PIK1P39104 1066 aa3.53□□□□□ -1.84
YCK3YER123W ACF4P47129 309 aa3.53□□□□□ -1.84
YCK3YER123W HOS3Q02959 697 aaKnown RBP3.53□□□□□ -1.84
YCK3YER123W KAR5Q04746 504 aa3.53□□□□□ -1.84
YCK3YER123W SRM1P21827 482 aa3.52□□□□□ -1.85
YCK3YER123W MOH1P38191 138 aa3.52□□□□□ -1.85
YCK3YER123W UBA2P52488 636 aa3.52□□□□□ -1.85
YCK3YER123W ATG1P53104 897 aa3.52□□□□□ -1.85
YCK3YER123W YLR224WQ05947 369 aa3.52□□□□□ -1.85
YCK3YER123W SPO21Q12411 609 aa3.52□□□□□ -1.85
YCK3YER123W VPS62P53285 467 aa3.51□□□□□ -1.85
YCK3YER123W PEX13P80667 386 aa3.51□□□□□ -1.85
YCK3YER123W YAP6Q03935 383 aa3.51□□□□□ -1.85
YCK3YER123W NOC3Q07896 663 aaPredicted RBP3.51□□□□□ -1.85
YCK3YER123W KIP1P28742 1111 aa3.51□□□□□ -1.85
YCK3YER123W ADD66P36040 267 aa3.51□□□□□ -1.85
YCK3YER123W RFC5P38251 354 aa3.51□□□□□ -1.85
YCK3YER123W ATF1P40353 525 aa3.51□□□□□ -1.85
YCK3YER123W YCS4Q06156 1176 aa3.51□□□□□ -1.85
YCK3YER123W SNF5P18480 905 aa3.48□□□□□ -1.85
YCK3YER123W GPB2P39717 880 aa3.48□□□□□ -1.85
YCK3YER123W KIN2P13186 1147 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms