RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	EEB1	Q02891	456 aa		3.16	□□□□□ -1.9
DOT6	YER088C	YMR074C	Q04773	145 aa		3.16	□□□□□ -1.9
DOT6	YER088C	YLL054C	Q12244	843 aa		3.16	□□□□□ -1.9
DOT6	YER088C	MKK2	P32491	506 aa		3.15	□□□□□ -1.9
DOT6	YER088C	PET112	P33893	541 aa		3.15	□□□□□ -1.9
DOT6	YER088C	MTR4	P47047	1073 aa	Known RBP	3.15	□□□□□ -1.9
DOT6	YER088C	ENT3	P47160	408 aa		3.15	□□□□□ -1.9
DOT6	YER088C	ALT1	P52893	592 aa		3.15	□□□□□ -1.9
DOT6	YER088C	YGR053C	P53234	283 aa		3.15	□□□□□ -1.9
DOT6	YER088C	ROD1	Q02805	837 aa		3.15	□□□□□ -1.9
DOT6	YER088C	MRL1	Q06815	381 aa		3.15	□□□□□ -1.9
DOT6	YER088C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
DOT6	YER088C	RTT10	Q08924	1013 aa		3.15	□□□□□ -1.9
DOT6	YER088C	SAF1	P38352	637 aa		3.15	□□□□□ -1.91
DOT6	YER088C	YAR028W	P39548	234 aa		3.15	□□□□□ -1.91
DOT6	YER088C	LSB3	P43603	459 aa	Known RBP	3.15	□□□□□ -1.91
DOT6	YER088C	ELA1	P53861	379 aa	Predicted RBP	3.15	□□□□□ -1.91
DOT6	YER088C	EAR1	Q03212	550 aa		3.15	□□□□□ -1.91
DOT6	YER088C	MTC5	Q03897	1148 aa		3.15	□□□□□ -1.91
DOT6	YER088C	EST2	Q06163	884 aa		3.15	□□□□□ -1.91
DOT6	YER088C	RER2	P35196	286 aa		3.14	□□□□□ -1.91
DOT6	YER088C	RAT1	Q02792	1006 aa	Known RBP	3.14	□□□□□ -1.91
DOT6	YER088C	GIC2	Q06648	383 aa		3.14	□□□□□ -1.91
DOT6	YER088C	YLR122C	Q12312	125 aa		3.14	□□□□□ -1.91
DOT6	YER088C	SMY2	P32909	740 aa	Known RBP	3.14	□□□□□ -1.91
DOT6	YER088C	AKR1	P39010	764 aa		3.14	□□□□□ -1.91
DOT6	YER088C	RSA3	Q05942	220 aa	Known RBP	3.14	□□□□□ -1.91
DOT6	YER088C	JIP5	Q06214	492 aa	Predicted RBP	3.14	□□□□□ -1.91
DOT6	YER088C	RET1	P22276	1149 aa	Known RBP	3.13	□□□□□ -1.91
DOT6	YER088C	NNK1	P36003	928 aa		3.13	□□□□□ -1.91
DOT6	YER088C	FAA4	P47912	694 aa	Known RBP	3.13	□□□□□ -1.91
DOT6	YER088C	AVO1	Q08236	1176 aa		3.13	□□□□□ -1.91
DOT6	YER088C	HSL1	P34244	1518 aa		3.13	□□□□□ -1.91
DOT6	YER088C	RPS4A	P0CX35	261 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	RPS4B	P0CX36	261 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	ALG3	P38179	458 aa		3.12	□□□□□ -1.91
DOT6	YER088C	QNS1	P38795	714 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	YNR063W	P53749	607 aa		3.12	□□□□□ -1.91
DOT6	YER088C	SPT6	P23615	1451 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	TRP2	P00899	507 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	DED1	P06634	604 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	NAP1	P25293	417 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	NFS1	P25374	497 aa		3.12	□□□□□ -1.91
DOT6	YER088C	MPH1	P40562	993 aa		3.12	□□□□□ -1.91
DOT6	YER088C	TIF35	Q04067	274 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	TMA46	Q12000	345 aa	Known RBP	3.12	□□□□□ -1.91
DOT6	YER088C	THO2	P53552	1597 aa	Known RBP	3.11	□□□□□ -1.91
DOT6	YER088C	TRP3	P00937	484 aa		3.11	□□□□□ -1.91
DOT6	YER088C	CLN2	P20438	545 aa		3.11	□□□□□ -1.91
DOT6	YER088C	SYP1	P25623	870 aa	Known RBP	3.11	□□□□□ -1.91
DOT6	YER088C	MMM1	P41800	426 aa		3.11	□□□□□ -1.91
DOT6	YER088C	OYE3	P41816	400 aa	Predicted RBP	3.11	□□□□□ -1.91
DOT6	YER088C	ALD6	P54115	500 aa	Known RBP	3.11	□□□□□ -1.91
DOT6	YER088C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
DOT6	YER088C	YLR257W	Q06146	321 aa	Known RBP	3.11	□□□□□ -1.91
DOT6	YER088C	PUS7	Q08647	676 aa	Known RBP	3.11	□□□□□ -1.91
DOT6	YER088C	LAP2	Q10740	671 aa		3.11	□□□□□ -1.91
DOT6	YER088C	YVC1	Q12324	675 aa		3.11	□□□□□ -1.91
DOT6	YER088C	CHS2	P14180	963 aa		3.1	□□□□□ -1.91
DOT6	YER088C	SAM35	P14693	329 aa		3.1	□□□□□ -1.91
DOT6	YER088C	DBP5	P20449	482 aa	Known RBP	3.1	□□□□□ -1.91
DOT6	YER088C	WHI3	P34761	661 aa	Known RBP	3.1	□□□□□ -1.91
DOT6	YER088C	KAE1	P36132	386 aa		3.1	□□□□□ -1.91
DOT6	YER088C	YKR073C	P36153	106 aa		3.1	□□□□□ -1.91
DOT6	YER088C	SEA4	P38164	1038 aa		3.1	□□□□□ -1.91
DOT6	YER088C	NMD3	P38861	518 aa	Known RBP	3.1	□□□□□ -1.91
DOT6	YER088C	TAT2	P38967	592 aa		3.1	□□□□□ -1.91
DOT6	YER088C	CNN1	P43618	361 aa		3.1	□□□□□ -1.91
DOT6	YER088C	VPS53	P47061	822 aa		3.1	□□□□□ -1.91
DOT6	YER088C	GDE1	Q02979	1223 aa		3.1	□□□□□ -1.91
DOT6	YER088C	YPL066W	Q12194	479 aa		3.1	□□□□□ -1.91
DOT6	YER088C	PTC5	Q12511	572 aa		3.1	□□□□□ -1.91
DOT6	YER088C	ECM5	Q03214	1411 aa		3.1	□□□□□ -1.91
DOT6	YER088C	KIP1	P28742	1111 aa		3.1	□□□□□ -1.91
DOT6	YER088C	LYP1	P32487	611 aa		3.1	□□□□□ -1.91
DOT6	YER088C	MAD1	P40957	749 aa		3.1	□□□□□ -1.91
DOT6	YER088C	CIT3	P43635	486 aa		3.1	□□□□□ -1.91
DOT6	YER088C	YJL045W	P47052	634 aa		3.1	□□□□□ -1.91
DOT6	YER088C	TYW3	P53177	273 aa		3.1	□□□□□ -1.91
DOT6	YER088C	NOP7	P53261	605 aa	Known RBP	3.1	□□□□□ -1.91
DOT6	YER088C	AOS1	Q06624	347 aa		3.1	□□□□□ -1.91
DOT6	YER088C	SGS1	P35187	1447 aa		3.09	□□□□□ -1.91
DOT6	YER088C	MSB1	P21339	1137 aa	Known RBP	3.09	□□□□□ -1.91
DOT6	YER088C	COQ2	P32378	372 aa		3.09	□□□□□ -1.91
DOT6	YER088C	YKL069W	P36088	180 aa		3.09	□□□□□ -1.91
DOT6	YER088C	BAP2	P38084	609 aa		3.09	□□□□□ -1.91
DOT6	YER088C	RGD1	P38339	666 aa		3.09	□□□□□ -1.91
DOT6	YER088C	HSE1	P38753	452 aa		3.09	□□□□□ -1.91
DOT6	YER088C	PEX7	P39108	375 aa		3.09	□□□□□ -1.91
DOT6	YER088C	VAC8	P39968	578 aa		3.09	□□□□□ -1.91
DOT6	YER088C	YGR130C	P53278	816 aa		3.09	□□□□□ -1.91
DOT6	YER088C	ESC2	Q06340	456 aa		3.09	□□□□□ -1.91
DOT6	YER088C	RCL1	Q08096	367 aa	Predicted RBP	3.09	□□□□□ -1.91
DOT6	YER088C	SSF2	Q12153	453 aa	Predicted RBP	3.09	□□□□□ -1.91
DOT6	YER088C	GCD1	P09032	578 aa	Predicted RBP	3.09	□□□□□ -1.92
DOT6	YER088C	INP52	P50942	1183 aa		3.09	□□□□□ -1.92
DOT6	YER088C	TPP1	Q03796	238 aa		3.09	□□□□□ -1.92
DOT6	YER088C	YOR059C	Q08448	450 aa	Known RBP	3.09	□□□□□ -1.92
DOT6	YER088C	YER152C	P10356	443 aa		3.08	□□□□□ -1.92
DOT6	YER088C	SNF5	P18480	905 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms