RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W FRT1Q99332 602 aa6.18□□□□□ -1.42
RPN9YDR427W SAM35P14693 329 aa6.17□□□□□ -1.42
RPN9YDR427W RET1P22276 1149 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W ABZ1P37254 787 aaPredicted RBP6.17□□□□□ -1.42
RPN9YDR427W EXO5P38289 585 aa6.17□□□□□ -1.42
RPN9YDR427W SLS1P42900 643 aa6.17□□□□□ -1.42
RPN9YDR427W MTR4P47047 1073 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W CLU1Q03690 1277 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W YLR257WQ06146 321 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W GPI13Q07830 1017 aa6.17□□□□□ -1.42
RPN9YDR427W HRK1Q08732 759 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W MSC6Q08818 692 aaKnown RBP6.17□□□□□ -1.42
RPN9YDR427W YHL050CP38721 697 aa6.16□□□□□ -1.42
RPN9YDR427W YHR219WP38900 624 aa6.16□□□□□ -1.42
RPN9YDR427W ATG14P38270 344 aa6.15□□□□□ -1.42
RPN9YDR427W MON1P53129 644 aa6.15□□□□□ -1.42
RPN9YDR427W LAP2Q10740 671 aa6.15□□□□□ -1.42
RPN9YDR427W TUB2P02557 457 aaKnown RBP6.14□□□□□ -1.43
RPN9YDR427W SRO9P25567 434 aaKnown RBP6.14□□□□□ -1.43
RPN9YDR427W SLD2P34252 453 aa6.14□□□□□ -1.43
RPN9YDR427W PPX1P38698 397 aa6.14□□□□□ -1.43
RPN9YDR427W NEM1P38757 446 aa6.14□□□□□ -1.43
RPN9YDR427W ENV11P53246 860 aa6.14□□□□□ -1.43
RPN9YDR427W YOR352WQ08816 343 aa6.14□□□□□ -1.43
RPN9YDR427W AIM26P32858 118 aa6.13□□□□□ -1.43
RPN9YDR427W SHM2P37291 469 aaKnown RBP6.13□□□□□ -1.43
RPN9YDR427W NMD3P38861 518 aaKnown RBP6.13□□□□□ -1.43
RPN9YDR427W PRE10P21242 288 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RPN9YDR427W SEC20P28791 383 aa6.12□□□□□ -1.43
RPN9YDR427W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RPN9YDR427W RSA3Q05942 220 aaKnown RBP6.12□□□□□ -1.43
RPN9YDR427W CTS1P29029 562 aa6.11□□□□□ -1.43
RPN9YDR427W NOC3Q07896 663 aaPredicted RBP6.11□□□□□ -1.43
RPN9YDR427W NBA1Q08229 501 aaKnown RBP6.11□□□□□ -1.43
RPN9YDR427W PNS1Q12412 539 aa6.11□□□□□ -1.43
RPN9YDR427W IPL1P38991 367 aa6.1□□□□□ -1.43
RPN9YDR427W NOG1Q02892 647 aaKnown RBP6.1□□□□□ -1.43
RPN9YDR427W UTP5Q04177 643 aaKnown RBP6.09□□□□□ -1.43
RPN9YDR427W WHI5Q12416 295 aa6.09□□□□□ -1.43
RPN9YDR427W SPS1P08458 490 aa6.08□□□□□ -1.44
RPN9YDR427W MET4P32389 672 aa6.08□□□□□ -1.44
RPN9YDR427W SAM37P50110 327 aa6.08□□□□□ -1.44
RPN9YDR427W TAD3Q9URQ3 322 aa6.08□□□□□ -1.44
RPN9YDR427W MPT5P39016 859 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
RPN9YDR427W XKS1P42826 600 aa6.07□□□□□ -1.44
RPN9YDR427W YCS4Q06156 1176 aa6.07□□□□□ -1.44
RPN9YDR427W PHO4P07270 312 aaKnown RBP6.06□□□□□ -1.44
RPN9YDR427W VMA4P22203 233 aaKnown RBP6.06□□□□□ -1.44
RPN9YDR427W HEM3P28789 327 aa6.06□□□□□ -1.44
RPN9YDR427W TAT2P38967 592 aa6.06□□□□□ -1.44
RPN9YDR427W YJL045WP47052 634 aa6.06□□□□□ -1.44
RPN9YDR427W RSC58Q07979 502 aa6.06□□□□□ -1.44
RPN9YDR427W MSH3P25336 1018 aa6.05□□□□□ -1.44
RPN9YDR427W CIC1P38779 376 aaKnown RBP6.05□□□□□ -1.44
RPN9YDR427W SPT20P50875 604 aa6.05□□□□□ -1.44
RPN9YDR427W SGD1Q06132 899 aa6.05□□□□□ -1.44
RPN9YDR427W QNS1P38795 714 aaKnown RBP6.04□□□□□ -1.44
RPN9YDR427W HNT2P49775 206 aa6.04□□□□□ -1.44
RPN9YDR427W YNR063WP53749 607 aa6.04□□□□□ -1.44
RPN9YDR427W YDR132CQ03900 495 aa6.04□□□□□ -1.44
RPN9YDR427W YSC84P32793 468 aa6.03□□□□□ -1.44
RPN9YDR427W VPS53P47061 822 aa6.03□□□□□ -1.44
RPN9YDR427W PEX13P80667 386 aa6.03□□□□□ -1.44
RPN9YDR427W VPS35P34110 944 aa6.02□□□□□ -1.45
RPN9YDR427W LAM1P38851 1228 aa6.02□□□□□ -1.45
RPN9YDR427W GCN5Q03330 439 aa6.02□□□□□ -1.45
RPN9YDR427W COQ4O13525 335 aa6.01□□□□□ -1.45
RPN9YDR427W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45 RIP-Chip
RPN9YDR427W THI12P42883 340 aa6.01□□□□□ -1.45
RPN9YDR427W THI5P43534 340 aa6.01□□□□□ -1.45
RPN9YDR427W RSM26P47141 266 aa6.01□□□□□ -1.45
RPN9YDR427W THI11P47183 340 aa6.01□□□□□ -1.45
RPN9YDR427W RKM2Q03942 479 aa6.01□□□□□ -1.45
RPN9YDR427W RRP15Q06511 250 aaPredicted RBP6.01□□□□□ -1.45
RPN9YDR427W THI13Q07748 340 aa6.01□□□□□ -1.45
RPN9YDR427W GCD6P32501 712 aaKnown RBP6□□□□□ -1.45
RPN9YDR427W TRM2P33753 639 aa6□□□□□ -1.45
RPN9YDR427W SQT1P35184 431 aa6□□□□□ -1.45
RPN9YDR427W CCZ1P38273 704 aa6□□□□□ -1.45
RPN9YDR427W MEF2P39677 819 aa6□□□□□ -1.45
RPN9YDR427W PUF4P25339 888 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
RPN9YDR427W PRP40P33203 583 aaKnown RBP5.99□□□□□ -1.45
RPN9YDR427W KAR2P16474 682 aaKnown RBP5.98□□□□□ -1.45
RPN9YDR427W ATE1P16639 503 aa5.98□□□□□ -1.45
RPN9YDR427W DAK2P43550 591 aa5.98□□□□□ -1.45
RPN9YDR427W UGA4P32837 571 aa5.97□□□□□ -1.45
RPN9YDR427W ADD66P36040 267 aa5.97□□□□□ -1.45
RPN9YDR427W SEC26P41810 973 aaKnown RBP5.97□□□□□ -1.45
RPN9YDR427W POL32P47110 350 aa5.97□□□□□ -1.45
RPN9YDR427W TOS4Q06266 489 aa5.97□□□□□ -1.45
RPN9YDR427W PUS9Q12069 462 aa5.97□□□□□ -1.45
RPN9YDR427W CYC1P00044 109 aaPredicted RBP5.96□□□□□ -1.46
RPN9YDR427W DOM34P33309 386 aa5.96□□□□□ -1.46
RPN9YDR427W DAL4Q04895 635 aa5.96□□□□□ -1.46
RPN9YDR427W URN1Q06525 465 aaKnown RBP5.96□□□□□ -1.46
RPN9YDR427W RSB1Q08417 382 aa5.96□□□□□ -1.46
RPN9YDR427W ASF1P32447 279 aa5.95□□□□□ -1.46
RPN9YDR427W YJR107WP47145 328 aa5.95□□□□□ -1.46
RPN9YDR427W ULP1Q02724 621 aa5.95□□□□□ -1.46
RPN9YDR427W PEX28P38848 579 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms