RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	RPL8A	P17076	256 aa	Known RBP	5.74	□□□□□ -1.49
GGA1	YDR358W	JJJ3	P47138	172 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	ENT3	P47160	408 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	GNP1	P48813	663 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	FOL1	P53848	824 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	UGO1	Q03327	502 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	HPF1	Q05164	967 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	NTG2	Q08214	380 aa		5.74	□□□□□ -1.49
GGA1	YDR358W	TRP2	P00899	507 aa	Known RBP	5.73	□□□□□ -1.49
GGA1	YDR358W	RPP1A	P05318	106 aa	Predicted RBP	5.73	□□□□□ -1.49
GGA1	YDR358W	SEC23	P15303	768 aa	Known RBP	5.73	□□□□□ -1.49
GGA1	YDR358W	PYC2	P32327	1180 aa	Known RBP	5.73	□□□□□ -1.49
GGA1	YDR358W	LYP1	P32487	611 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	VBA5	P36172	582 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	PEX28	P38848	579 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	GEM1	P39722	662 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	PPT1	P53043	513 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	UTP8	P53276	713 aa	Known RBP	5.73	□□□□□ -1.49
GGA1	YDR358W	TPO2	P53283	614 aa		5.73	□□□□□ -1.49
GGA1	YDR358W	SCT1	P32784	759 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	SEC6	P32844	805 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	CEF1	Q03654	590 aa	Predicted RBP	5.72	□□□□□ -1.49
GGA1	YDR358W	KAR1	P11927	433 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	PRP9	P19736	530 aa	Known RBP	5.72	□□□□□ -1.49
GGA1	YDR358W	SHU2	P38957	223 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	SNF7	P39929	240 aa	Known RBP	5.72	□□□□□ -1.49
GGA1	YDR358W	PFD1	P46988	109 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	HLJ1	P48353	224 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	YGL140C	P53120	1219 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	SIW14	P53965	281 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	NOG1	Q02892	647 aa	Known RBP	5.72	□□□□□ -1.49
GGA1	YDR358W	TAF8	Q03750	510 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	HDA2	Q06629	674 aa		5.72	□□□□□ -1.49
GGA1	YDR358W	GPM1	P00950	247 aa	Known RBP	5.71	□□□□□ -1.5
GGA1	YDR358W	PWP2	P25635	923 aa	Known RBP	5.71	□□□□□ -1.5
GGA1	YDR358W	ABD1	P32783	436 aa	Predicted RBP	5.71	□□□□□ -1.5
GGA1	YDR358W	RER2	P35196	286 aa		5.71	□□□□□ -1.5
GGA1	YDR358W	TFA2	P36145	328 aa		5.71	□□□□□ -1.5
GGA1	YDR358W	PEX13	P80667	386 aa		5.71	□□□□□ -1.5
GGA1	YDR358W	SEA4	P38164	1038 aa		5.7	□□□□□ -1.5
GGA1	YDR358W	PMT3	P47190	753 aa		5.7	□□□□□ -1.5
GGA1	YDR358W	YDL124W	Q07551	312 aa	Known RBP	5.7	□□□□□ -1.5
GGA1	YDR358W	PDC5	P16467	563 aa	Known RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	DPB3	P27344	201 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	PEX6	P33760	1030 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	AMN1	P38285	549 aa	Predicted RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	HSV2	P50079	448 aa	Predicted RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	YGR237C	P50089	785 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	TFB2	Q02939	513 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	VMS1	Q04311	632 aa	Known RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	YLR225C	Q05948	407 aa	Known RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	ESC2	Q06340	456 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	HVG1	P0CE11	249 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	MSH3	P25336	1018 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
GGA1	YDR358W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
GGA1	YDR358W	VPS24	P36095	224 aa	Known RBP	5.69	□□□□□ -1.5
GGA1	YDR358W	RIM11	P38615	370 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	HXT13	P39924	564 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	ALR2	P43553	858 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	PEX8	P53248	589 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	HXT17	P53631	564 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	HXT15	P54854	567 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	ATG13	Q06628	738 aa		5.69	□□□□□ -1.5
GGA1	YDR358W	FUS1	P11710	512 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	PRP5	P21372	849 aa	Predicted RBP	5.68	□□□□□ -1.5
GGA1	YDR358W	INP51	P40559	946 aa	Known RBP	5.68	□□□□□ -1.5
GGA1	YDR358W	RTA1	P53047	317 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	YPL062W	Q02781	134 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	RSC2	Q06488	889 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	GIN4	Q12263	1142 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	GLO4	Q12320	285 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	DPH6	Q12429	685 aa		5.68	□□□□□ -1.5
GGA1	YDR358W	NPR1	P22211	790 aa		5.67	□□□□□ -1.5
GGA1	YDR358W	KNS1	P32350	737 aa	Predicted RBP	5.67	□□□□□ -1.5
GGA1	YDR358W	YJL181W	P46987	611 aa		5.67	□□□□□ -1.5
GGA1	YDR358W	MTR4	P47047	1073 aa	Known RBP	5.67	□□□□□ -1.5
GGA1	YDR358W	YGR035C	P53222	116 aa		5.67	□□□□□ -1.5
GGA1	YDR358W	BIO5	P53744	561 aa	Known RBP	5.67	□□□□□ -1.5
GGA1	YDR358W	GIC2	Q06648	383 aa		5.67	□□□□□ -1.5
GGA1	YDR358W	CMR1	Q12510	522 aa	Known RBP	5.67	□□□□□ -1.5
GGA1	YDR358W	TMA7	Q3E764	64 aa	Known RBP	5.67	□□□□□ -1.5
GGA1	YDR358W	VMA4	P22203	233 aa	Known RBP	5.66	□□□□□ -1.5
GGA1	YDR358W	GDH3	P39708	457 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	ECM16	Q04217	1267 aa	Known RBP	5.66	□□□□□ -1.5
GGA1	YDR358W	YDL121C	Q07541	149 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	SLX4	Q12098	748 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	RKM4	Q12504	494 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	TMA17	Q12513	150 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	INO1	P11986	533 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	BET3	P36149	193 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	RDH54	P38086	958 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	SOG2	Q08817	791 aa		5.66	□□□□□ -1.5
GGA1	YDR358W	NUP145	P49687	1317 aa		5.65	□□□□□ -1.5
GGA1	YDR358W	HEM13	P11353	328 aa	Known RBP	5.65	□□□□□ -1.51
GGA1	YDR358W	NAR1	P23503	491 aa	Known RBP	5.65	□□□□□ -1.51
GGA1	YDR358W	CDC11	P32458	415 aa		5.65	□□□□□ -1.51
GGA1	YDR358W	YNL193W	P53870	558 aa		5.65	□□□□□ -1.51
GGA1	YDR358W	ATP4	P05626	244 aa		5.64	□□□□□ -1.51
GGA1	YDR358W	YKL107W	P34251	309 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms