RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C TY1A-GR1Q12085 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C TY1A-OLQ92392 440 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C CLN2P20438 545 aa4.78□□□□□ -1.64
RRP42YDL111C MON1P53129 644 aa4.78□□□□□ -1.64
RRP42YDL111C DOS2P54858 310 aa4.78□□□□□ -1.64
RRP42YDL111C NOC3Q07896 663 aaPredicted RBP4.78□□□□□ -1.64
RRP42YDL111C NFS1P25374 497 aa4.77□□□□□ -1.65
RRP42YDL111C SMY2P32909 740 aaKnown RBP4.77□□□□□ -1.65
RRP42YDL111C EXO5P38289 585 aa4.77□□□□□ -1.65
RRP42YDL111C CIC1P38779 376 aaKnown RBP4.77□□□□□ -1.65
RRP42YDL111C PEX7P39108 375 aa4.77□□□□□ -1.65
RRP42YDL111C ELA1P53861 379 aaPredicted RBP4.77□□□□□ -1.65
RRP42YDL111C ESC8Q08119 714 aa4.77□□□□□ -1.65
RRP42YDL111C TRE1Q08919 783 aa4.77□□□□□ -1.65
RRP42YDL111C OXR1Q08952 273 aa4.77□□□□□ -1.65
RRP42YDL111C PIN2Q12057 282 aa4.77□□□□□ -1.65
RRP42YDL111C YVC1Q12324 675 aa4.77□□□□□ -1.65
RRP42YDL111C NNK1P36003 928 aa4.76□□□□□ -1.65
RRP42YDL111C YKL077WP36081 392 aa4.76□□□□□ -1.65
RRP42YDL111C MAD1P40957 749 aa4.76□□□□□ -1.65
RRP42YDL111C SLS1P42900 643 aa4.76□□□□□ -1.65
RRP42YDL111C YGR122WP53272 402 aa4.76□□□□□ -1.65
RRP42YDL111C SSY1Q03770 852 aa4.76□□□□□ -1.65
RRP42YDL111C YCS4Q06156 1176 aa4.76□□□□□ -1.65
RRP42YDL111C ESF1Q06344 628 aaKnown RBP4.76□□□□□ -1.65
RRP42YDL111C AVO1Q08236 1176 aa4.76□□□□□ -1.65
RRP42YDL111C MNR2P35724 969 aa4.75□□□□□ -1.65
RRP42YDL111C VPS16Q03308 798 aa4.75□□□□□ -1.65
RRP42YDL111C SPR28Q04921 423 aa4.75□□□□□ -1.65
RRP42YDL111C YOL098CQ12496 1037 aa4.75□□□□□ -1.65
RRP42YDL111C MCM2P29469 868 aa4.74□□□□□ -1.65
RRP42YDL111C THI80P35202 319 aa4.74□□□□□ -1.65
RRP42YDL111C BRN1P38170 754 aa4.74□□□□□ -1.65
RRP42YDL111C NMD2P38798 1089 aaKnown RBP4.74□□□□□ -1.65
RRP42YDL111C SHU2P38957 223 aa4.74□□□□□ -1.65
RRP42YDL111C YJL049WP47048 450 aa4.74□□□□□ -1.65
RRP42YDL111C NOG1Q02892 647 aaKnown RBP4.74□□□□□ -1.65
RRP42YDL111C IOC4Q04213 475 aa4.74□□□□□ -1.65
RRP42YDL111C LPX1Q12405 387 aaKnown RBP4.74□□□□□ -1.65
RRP42YDL111C CYC8P14922 966 aa4.73□□□□□ -1.65
RRP42YDL111C PEP7P32609 515 aa4.73□□□□□ -1.65
RRP42YDL111C NEM1P38757 446 aa4.73□□□□□ -1.65
RRP42YDL111C RPS26AP39938 119 aaKnown RBP4.73□□□□□ -1.65
RRP42YDL111C RPS26BP39939 119 aaKnown RBP4.73□□□□□ -1.65
RRP42YDL111C TAF1P46677 1066 aa4.73□□□□□ -1.65
RRP42YDL111C ALD6P54115 500 aaKnown RBP4.73□□□□□ -1.65
RRP42YDL111C PRP6P19735 899 aaPredicted RBP4.72□□□□□ -1.65
RRP42YDL111C PRO1P32264 428 aa4.72□□□□□ -1.65
RRP42YDL111C GIP4P39732 760 aa4.72□□□□□ -1.65
RRP42YDL111C VAC8P39968 578 aa4.72□□□□□ -1.65
RRP42YDL111C HXK1P04806 485 aaKnown RBP4.71□□□□□ -1.66
RRP42YDL111C RAD2P07276 1031 aa4.71□□□□□ -1.66
RRP42YDL111C PET112P33893 541 aa4.71□□□□□ -1.66
RRP42YDL111C SPC42P36094 363 aa4.71□□□□□ -1.66
RRP42YDL111C YAR028WP39548 234 aa4.71□□□□□ -1.66
RRP42YDL111C UTP5Q04177 643 aaKnown RBP4.71□□□□□ -1.66
RRP42YDL111C PUS7Q08647 676 aaKnown RBP4.71□□□□□ -1.66
RRP42YDL111C PTC7P38797 343 aa4.7□□□□□ -1.66
RRP42YDL111C OSW7P43611 510 aa4.7□□□□□ -1.66
RRP42YDL111C MTR4P47047 1073 aaKnown RBP4.7□□□□□ -1.66
RRP42YDL111C WRS1Q12109 432 aaKnown RBP4.7□□□□□ -1.66
RRP42YDL111C SSF2Q12153 453 aaPredicted RBP4.7□□□□□ -1.66
RRP42YDL111C MCD1Q12158 566 aa4.7□□□□□ -1.66
RRP42YDL111C RET1P22276 1149 aaKnown RBP4.69□□□□□ -1.66
RRP42YDL111C MSH3P25336 1018 aa4.69□□□□□ -1.66
RRP42YDL111C TPP1Q03796 238 aa4.69□□□□□ -1.66
RRP42YDL111C KAR2P16474 682 aaKnown RBP4.68□□□□□ -1.66
RRP42YDL111C SRP40P32583 406 aaPredicted RBP4.68□□□□□ -1.66
RRP42YDL111C PRP40P33203 583 aaKnown RBP4.68□□□□□ -1.66
RRP42YDL111C MRPS18P42847 217 aa4.68□□□□□ -1.66
RRP42YDL111C YLR257WQ06146 321 aaKnown RBP4.68□□□□□ -1.66
RRP42YDL111C SAM35P14693 329 aa4.67□□□□□ -1.66
RRP42YDL111C STI1P15705 589 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
RRP42YDL111C VMA4P22203 233 aaKnown RBP4.67□□□□□ -1.66
RRP42YDL111C PRE9P23638 258 aaKnown RBP4.67□□□□□ -1.66
RRP42YDL111C FLR1P38124 548 aa4.67□□□□□ -1.66
RRP42YDL111C FAA3P39002 694 aa4.67□□□□□ -1.66
RRP42YDL111C GTS1P40956 396 aa4.67□□□□□ -1.66
RRP42YDL111C CWC24P53769 259 aa4.67□□□□□ -1.66
RRP42YDL111C MRPL22P53881 309 aa4.67□□□□□ -1.66
RRP42YDL111C PEX13P80667 386 aa4.67□□□□□ -1.66
RRP42YDL111C ULP1Q02724 621 aa4.67□□□□□ -1.66
RRP42YDL111C DAL4Q04895 635 aa4.67□□□□□ -1.66
RRP42YDL111C NSE3Q05541 303 aa4.67□□□□□ -1.66
RRP42YDL111C YDL177CQ12257 170 aa4.67□□□□□ -1.66
RRP42YDL111C UGA4P32837 571 aa4.66□□□□□ -1.66
RRP42YDL111C HSE1P38753 452 aa4.66□□□□□ -1.66
RRP42YDL111C XKS1P42826 600 aa4.66□□□□□ -1.66
RRP42YDL111C IOC3P43596 787 aa4.66□□□□□ -1.66
RRP42YDL111C RIM8P53179 542 aa4.66□□□□□ -1.66
RRP42YDL111C RNH70P53331 553 aa4.66□□□□□ -1.66
RRP42YDL111C RPN4Q03465 531 aa4.66□□□□□ -1.66
RRP42YDL111C RSA3Q05942 220 aaKnown RBP4.66□□□□□ -1.66
RRP42YDL111C TOS4Q06266 489 aa4.66□□□□□ -1.66
RRP42YDL111C HDA2Q06629 674 aa4.66□□□□□ -1.66
RRP42YDL111C LAP2Q10740 671 aa4.66□□□□□ -1.66
RRP42YDL111C CDC34P14682 295 aa4.65□□□□□ -1.67
RRP42YDL111C YKL091CP33324 310 aaKnown RBP4.65□□□□□ -1.67
RRP42YDL111C RDH54P38086 958 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms