RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W DED1P06634 604 aaKnown RBP5.88□□□□□ -1.47
KIN28YDL108W NEM1P38757 446 aa5.88□□□□□ -1.47
KIN28YDL108W MEC3Q02574 474 aa5.88□□□□□ -1.47
KIN28YDL108W GDE1Q02979 1223 aa5.88□□□□□ -1.47
KIN28YDL108W HDA2Q06629 674 aa5.88□□□□□ -1.47
KIN28YDL108W ERS1P17261 260 aa5.87□□□□□ -1.47
KIN28YDL108W TOA1P32773 286 aa5.87□□□□□ -1.47
KIN28YDL108W ARL1P38116 183 aaKnown RBP5.87□□□□□ -1.47
KIN28YDL108W REI1P38344 393 aaPredicted RBP5.87□□□□□ -1.47
KIN28YDL108W SLS1P42900 643 aa5.87□□□□□ -1.47
KIN28YDL108W TMA46Q12000 345 aaKnown RBP5.87□□□□□ -1.47
KIN28YDL108W RDH54P38086 958 aa5.86□□□□□ -1.47
KIN28YDL108W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
KIN28YDL108W FAA4P47912 694 aaKnown RBP5.86□□□□□ -1.47
KIN28YDL108W SIW14P53965 281 aa5.86□□□□□ -1.47
KIN28YDL108W DOS2P54858 310 aa5.86□□□□□ -1.47
KIN28YDL108W UTP5Q04177 643 aaKnown RBP5.86□□□□□ -1.47
KIN28YDL108W HEM13P11353 328 aaKnown RBP5.85□□□□□ -1.47
KIN28YDL108W DUT1P33317 147 aa5.85□□□□□ -1.47
KIN28YDL108W GNP1P48813 663 aa5.85□□□□□ -1.47
KIN28YDL108W KIP3P53086 805 aaKnown RBP5.85□□□□□ -1.47
KIN28YDL108W EST2Q06163 884 aa5.85□□□□□ -1.47
KIN28YDL108W AVO1Q08236 1176 aa5.85□□□□□ -1.47
KIN28YDL108W ALG6Q12001 544 aaKnown RBP5.85□□□□□ -1.47
KIN28YDL108W YOR223WQ12015 292 aa5.85□□□□□ -1.47
KIN28YDL108W WRS1Q12109 432 aaKnown RBP5.85□□□□□ -1.47
KIN28YDL108W ADD66P36040 267 aa5.84□□□□□ -1.47
KIN28YDL108W ENT3P47160 408 aa5.84□□□□□ -1.47
KIN28YDL108W YNR063WP53749 607 aa5.84□□□□□ -1.47
KIN28YDL108W ROD1Q02805 837 aa5.84□□□□□ -1.47
KIN28YDL108W REC8Q12188 680 aa5.84□□□□□ -1.47
KIN28YDL108W SPO74P45819 413 aa5.83□□□□□ -1.48
KIN28YDL108W NNF1P47149 201 aa5.83□□□□□ -1.48
KIN28YDL108W HSE1P38753 452 aa5.82□□□□□ -1.48
KIN28YDL108W YAR028WP39548 234 aa5.82□□□□□ -1.48
KIN28YDL108W RKM2Q03942 479 aa5.82□□□□□ -1.48
KIN28YDL108W DOT1Q04089 582 aaKnown RBP5.82□□□□□ -1.48
KIN28YDL108W GAS5Q08193 484 aa5.82□□□□□ -1.48
KIN28YDL108W LAP2Q10740 671 aa5.82□□□□□ -1.48
KIN28YDL108W FAL1Q12099 399 aaKnown RBP5.82□□□□□ -1.48
KIN28YDL108W SSF2Q12153 453 aaPredicted RBP5.82□□□□□ -1.48
KIN28YDL108W TY1A-NL1Q12391 440 aaKnown RBP5.82□□□□□ -1.48
KIN28YDL108W PRI2P20457 528 aa5.81□□□□□ -1.48
KIN28YDL108W MKK2P32491 506 aa5.81□□□□□ -1.48
KIN28YDL108W SFA1P32771 386 aa5.81□□□□□ -1.48
KIN28YDL108W HXT13P39924 564 aa5.81□□□□□ -1.48
KIN28YDL108W AIM21P40563 679 aa5.81□□□□□ -1.48
KIN28YDL108W ZDS1P50111 915 aaKnown RBP5.81□□□□□ -1.48
KIN28YDL108W BUD9P53226 547 aa5.81□□□□□ -1.48
KIN28YDL108W YGR053CP53234 283 aa5.81□□□□□ -1.48
KIN28YDL108W CWC22P53333 577 aaKnown RBP5.81□□□□□ -1.48
KIN28YDL108W HXT17P53631 564 aa5.81□□□□□ -1.48
KIN28YDL108W HXT15P54854 567 aa5.81□□□□□ -1.48
KIN28YDL108W EEB1Q02891 456 aa5.81□□□□□ -1.48
KIN28YDL108W TRP2P00899 507 aaKnown RBP5.8□□□□□ -1.48
KIN28YDL108W RSC6P25632 483 aa5.8□□□□□ -1.48
KIN28YDL108W RER2P35196 286 aa5.8□□□□□ -1.48
KIN28YDL108W TYW3P53177 273 aa5.8□□□□□ -1.48
KIN28YDL108W ELA1P53861 379 aaPredicted RBP5.8□□□□□ -1.48
KIN28YDL108W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
KIN28YDL108W SPO20Q04359 397 aa5.8□□□□□ -1.48
KIN28YDL108W AI3P03877 415 aa5.79□□□□□ -1.48
KIN28YDL108W BAS1P22035 811 aa5.79□□□□□ -1.48
KIN28YDL108W SYP1P25623 870 aaKnown RBP5.79□□□□□ -1.48
KIN28YDL108W LYP1P32487 611 aa5.79□□□□□ -1.48
KIN28YDL108W TAT1P38085 619 aa5.79□□□□□ -1.48
KIN28YDL108W PRY1P47032 299 aa5.79□□□□□ -1.48
KIN28YDL108W YGR045CP53229 120 aa5.79□□□□□ -1.48
KIN28YDL108W NCE103P53615 221 aa5.79□□□□□ -1.48
KIN28YDL108W TOM20P35180 183 aa5.78□□□□□ -1.48
KIN28YDL108W RPT2P40327 437 aaKnown RBP5.78□□□□□ -1.48
KIN28YDL108W TY4A-JP47023 414 aa5.78□□□□□ -1.48
KIN28YDL108W RAT1Q02792 1006 aaKnown RBP5.78□□□□□ -1.48
KIN28YDL108W OPI10Q08202 246 aa5.78□□□□□ -1.48
KIN28YDL108W CAB3P36076 571 aa5.77□□□□□ -1.49
KIN28YDL108W GPT2P36148 743 aa5.77□□□□□ -1.49
KIN28YDL108W ALG3P38179 458 aa5.77□□□□□ -1.49
KIN28YDL108W OCA5P38738 679 aa5.77□□□□□ -1.49
KIN28YDL108W CNN1P43618 361 aa5.77□□□□□ -1.49
KIN28YDL108W VPS53P47061 822 aa5.77□□□□□ -1.49
KIN28YDL108W FPR4Q06205 392 aaPredicted RBP5.77□□□□□ -1.49
KIN28YDL108W TDA5Q06417 326 aaKnown RBP5.77□□□□□ -1.49
KIN28YDL108W PTC5Q12511 572 aa5.77□□□□□ -1.49
KIN28YDL108W AFG2P32794 780 aa5.76□□□□□ -1.49
KIN28YDL108W NNK1P36003 928 aa5.76□□□□□ -1.49
KIN28YDL108W MCM7P38132 845 aa5.76□□□□□ -1.49
KIN28YDL108W MSH4P40965 878 aaPredicted RBP5.76□□□□□ -1.49
KIN28YDL108W YJL049WP47048 450 aa5.76□□□□□ -1.49
KIN28YDL108W MPP10P47083 593 aaKnown RBP5.76□□□□□ -1.49
KIN28YDL108W ARI1P53111 347 aaKnown RBP5.76□□□□□ -1.49
KIN28YDL108W AOS1Q06624 347 aa5.76□□□□□ -1.49
KIN28YDL108W UBX5Q06682 500 aa5.76□□□□□ -1.49
KIN28YDL108W INO1P11986 533 aa5.75□□□□□ -1.49
KIN28YDL108W DBP5P20449 482 aaKnown RBP5.75□□□□□ -1.49
KIN28YDL108W NFS1P25374 497 aa5.75□□□□□ -1.49
KIN28YDL108W SMY2P32909 740 aaKnown RBP5.75□□□□□ -1.49
KIN28YDL108W MOT2P34909 587 aaKnown RBP5.75□□□□□ -1.49
KIN28YDL108W MAC1P35192 417 aa5.75□□□□□ -1.49
KIN28YDL108W YKL069WP36088 180 aa5.75□□□□□ -1.49
KIN28YDL108W NMD2P38798 1089 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms