RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	YNR063W	P53749	607 aa		6.17	□□□□□ -1.42
MSS2	YDL107W	GIC2	Q06648	383 aa		6.17	□□□□□ -1.42
MSS2	YDL107W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.17	□□□□□ -1.42	RIP-Chip
MSS2	YDL107W	AVO1	Q08236	1176 aa		6.17	□□□□□ -1.42
MSS2	YDL107W	VMA4	P22203	233 aa	Known RBP	6.16	□□□□□ -1.42
MSS2	YDL107W	RDH54	P38086	958 aa		6.16	□□□□□ -1.42
MSS2	YDL107W	ARL1	P38116	183 aa	Known RBP	6.16	□□□□□ -1.42
MSS2	YDL107W	GCR1	P07261	785 aa		6.15	□□□□□ -1.42
MSS2	YDL107W	SEC23	P15303	768 aa	Known RBP	6.15	□□□□□ -1.42
MSS2	YDL107W	SAF1	P38352	637 aa		6.15	□□□□□ -1.42
MSS2	YDL107W	MSH4	P40965	878 aa	Predicted RBP	6.15	□□□□□ -1.42
MSS2	YDL107W	YLR122C	Q12312	125 aa		6.15	□□□□□ -1.42
MSS2	YDL107W	YOL098C	Q12496	1037 aa		6.15	□□□□□ -1.42
MSS2	YDL107W	DED1	P06634	604 aa	Known RBP	6.14	□□□□□ -1.43
MSS2	YDL107W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
MSS2	YDL107W	YAR028W	P39548	234 aa		6.13	□□□□□ -1.43
MSS2	YDL107W	GDE1	Q02979	1223 aa		6.13	□□□□□ -1.43
MSS2	YDL107W	EST2	Q06163	884 aa		6.13	□□□□□ -1.43
MSS2	YDL107W	HDA2	Q06629	674 aa		6.13	□□□□□ -1.43
MSS2	YDL107W	MRL1	Q06815	381 aa		6.13	□□□□□ -1.43
MSS2	YDL107W	RPS4A	P0CX35	261 aa	Known RBP	6.12	□□□□□ -1.43
MSS2	YDL107W	RPS4B	P0CX36	261 aa	Known RBP	6.12	□□□□□ -1.43
MSS2	YDL107W	CHS2	P14180	963 aa		6.12	□□□□□ -1.43
MSS2	YDL107W	WHI3	P34761	661 aa	Known RBP	6.12	□□□□□ -1.43
MSS2	YDL107W	ADD66	P36040	267 aa		6.12	□□□□□ -1.43
MSS2	YDL107W	KAE1	P36132	386 aa		6.12	□□□□□ -1.43
MSS2	YDL107W	NMD3	P38861	518 aa	Known RBP	6.12	□□□□□ -1.43
MSS2	YDL107W	YGR130C	P53278	816 aa		6.12	□□□□□ -1.43
MSS2	YDL107W	EAR1	Q03212	550 aa		6.12	□□□□□ -1.43
MSS2	YDL107W	TRP3	P00937	484 aa		6.11	□□□□□ -1.43
MSS2	YDL107W	CDC34	P14682	295 aa		6.11	□□□□□ -1.43
MSS2	YDL107W	NFS1	P25374	497 aa		6.11	□□□□□ -1.43
MSS2	YDL107W	SRP40	P32583	406 aa	Predicted RBP	6.11	□□□□□ -1.43
MSS2	YDL107W	ATG14	P38270	344 aa		6.11	□□□□□ -1.43
MSS2	YDL107W	ALO1	P54783	526 aa	Known RBP	6.11	□□□□□ -1.43
MSS2	YDL107W	ROD1	Q02805	837 aa		6.11	□□□□□ -1.43
MSS2	YDL107W	OMA1	P36163	345 aa		6.1	□□□□□ -1.43
MSS2	YDL107W	FPR4	Q06205	392 aa	Predicted RBP	6.1	□□□□□ -1.43
MSS2	YDL107W	RET1	P22276	1149 aa	Known RBP	6.09	□□□□□ -1.43
MSS2	YDL107W	AFG2	P32794	780 aa		6.09	□□□□□ -1.43
MSS2	YDL107W	SMY2	P32909	740 aa	Known RBP	6.09	□□□□□ -1.43
MSS2	YDL107W	FAA4	P47912	694 aa	Known RBP	6.09	□□□□□ -1.43
MSS2	YDL107W	GNP1	P48813	663 aa		6.09	□□□□□ -1.43
MSS2	YDL107W	SSF2	Q12153	453 aa	Predicted RBP	6.09	□□□□□ -1.43
MSS2	YDL107W	PRI2	P20457	528 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	RAD27	P26793	382 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	NNK1	P36003	928 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	MMM1	P41800	426 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	ALT1	P52893	592 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	YLR257W	Q06146	321 aa	Known RBP	6.08	□□□□□ -1.44
MSS2	YDL107W	RTT10	Q08924	1013 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	LAP2	Q10740	671 aa		6.08	□□□□□ -1.44
MSS2	YDL107W	YKL091C	P33324	310 aa	Known RBP	6.07	□□□□□ -1.44
MSS2	YDL107W	YKR073C	P36153	106 aa		6.07	□□□□□ -1.44
MSS2	YDL107W	HXT13	P39924	564 aa		6.07	□□□□□ -1.44
MSS2	YDL107W	HXT17	P53631	564 aa		6.07	□□□□□ -1.44
MSS2	YDL107W	HXT15	P54854	567 aa		6.07	□□□□□ -1.44
MSS2	YDL107W	RAT1	Q02792	1006 aa	Known RBP	6.07	□□□□□ -1.44
MSS2	YDL107W	RSA3	Q05942	220 aa	Known RBP	6.07	□□□□□ -1.44
MSS2	YDL107W	MSB1	P21339	1137 aa	Known RBP	6.06	□□□□□ -1.44
MSS2	YDL107W	GRX1	P25373	110 aa	Known RBP	6.06	□□□□□ -1.44
MSS2	YDL107W	YJL049W	P47048	450 aa		6.06	□□□□□ -1.44
MSS2	YDL107W	INP52	P50942	1183 aa		6.06	□□□□□ -1.44
MSS2	YDL107W	SIW14	P53965	281 aa		6.06	□□□□□ -1.44
MSS2	YDL107W	TPP1	Q03796	238 aa		6.06	□□□□□ -1.44
MSS2	YDL107W	RKM2	Q03942	479 aa		6.06	□□□□□ -1.44
MSS2	YDL107W	TMA46	Q12000	345 aa	Known RBP	6.06	□□□□□ -1.44
MSS2	YDL107W	CYC7	P00045	113 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	TAF13	P11747	167 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	MKK2	P32491	506 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	DUT1	P33317	147 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	HSE1	P38753	452 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	QNS1	P38795	714 aa	Known RBP	6.05	□□□□□ -1.44
MSS2	YDL107W	IRC24	P40580	263 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	IOC3	P43596	787 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	CIT3	P43635	486 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	YGR053C	P53234	283 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	RCM1	P53972	490 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	OPI10	Q08202	246 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	MED7	Q08278	222 aa		6.05	□□□□□ -1.44
MSS2	YDL107W	PUS7	Q08647	676 aa	Known RBP	6.05	□□□□□ -1.44
MSS2	YDL107W	FAL1	Q12099	399 aa	Known RBP	6.05	□□□□□ -1.44
MSS2	YDL107W	GCD1	P09032	578 aa	Predicted RBP	6.04	□□□□□ -1.44
MSS2	YDL107W	ALG3	P38179	458 aa		6.04	□□□□□ -1.44
MSS2	YDL107W	NSE3	Q05541	303 aa		6.04	□□□□□ -1.44
MSS2	YDL107W	TDA5	Q06417	326 aa	Known RBP	6.04	□□□□□ -1.44
MSS2	YDL107W	CDC53	Q12018	815 aa	Known RBP	6.04	□□□□□ -1.44
MSS2	YDL107W	YVC1	Q12324	675 aa		6.04	□□□□□ -1.44
MSS2	YDL107W	PTC5	Q12511	572 aa		6.04	□□□□□ -1.44
MSS2	YDL107W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	not detected
MSS2	YDL107W	RER2	P35196	286 aa		6.03	□□□□□ -1.44
MSS2	YDL107W	BRN1	P38170	754 aa		6.03	□□□□□ -1.44
MSS2	YDL107W	YOR131C	Q12486	218 aa		6.03	□□□□□ -1.44
MSS2	YDL107W	BAS1	P22035	811 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	TOS1	P38288	455 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	GPB2	P39717	880 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	OSW7	P43611	510 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	YJL045W	P47052	634 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	VPS53	P47061	822 aa		6.02	□□□□□ -1.45
MSS2	YDL107W	RNH70	P53331	553 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms