RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W CAB3P36076 571 aa4.8□□□□□ -1.64
TSR1YDL060W HSE1P38753 452 aa4.8□□□□□ -1.64
TSR1YDL060W SLS1P42900 643 aa4.8□□□□□ -1.64
TSR1YDL060W YGR045CP53229 120 aa4.8□□□□□ -1.64
TSR1YDL060W ADI1Q03677 179 aa4.8□□□□□ -1.64
TSR1YDL060W SKI3P17883 1432 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W CIT2P08679 460 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-LR4P0C2I8 440 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W RPS4AP0CX35 261 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W RPS4BP0CX36 261 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W TY1A-DR6P0CX70 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-ER1P0CX71 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-LR2P0CX72 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-PLP0CX73 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-JR1P0CX74 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-LR3P0CX75 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-ML2P0CX76 440 aa4.8□□□□□ -1.64
TSR1YDL060W TSR4P25040 408 aa4.8□□□□□ -1.64
TSR1YDL060W UGA4P32837 571 aa4.8□□□□□ -1.64
TSR1YDL060W WHI3P34761 661 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W NNK1P36003 928 aa4.8□□□□□ -1.64
TSR1YDL060W RRP14P36080 434 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W PEX28P38848 579 aa4.8□□□□□ -1.64
TSR1YDL060W MRPS18P42847 217 aa4.8□□□□□ -1.64
TSR1YDL060W IOC3P43596 787 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-GR1Q12085 440 aa4.8□□□□□ -1.64
TSR1YDL060W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W TY1A-OLQ92392 440 aaKnown RBP4.8□□□□□ -1.64
TSR1YDL060W NFS1P25374 497 aa4.79□□□□□ -1.64
TSR1YDL060W MSH4P40965 878 aaPredicted RBP4.79□□□□□ -1.64
TSR1YDL060W RCM1P53972 490 aa4.79□□□□□ -1.64
TSR1YDL060W VMA4P22203 233 aaKnown RBP4.79□□□□□ -1.64
TSR1YDL060W YAR028WP39548 234 aa4.79□□□□□ -1.64
TSR1YDL060W GLT1Q12680 2145 aaKnown RBP4.79□□□□□ -1.64
TSR1YDL060W YKL091CP33324 310 aaKnown RBP4.78□□□□□ -1.64
TSR1YDL060W YKR073CP36153 106 aa4.78□□□□□ -1.64
TSR1YDL060W FPR3P38911 411 aaKnown RBP4.78□□□□□ -1.64
TSR1YDL060W ALG12P53730 551 aa4.78□□□□□ -1.64
TSR1YDL060W YNR063WP53749 607 aa4.78□□□□□ -1.64
TSR1YDL060W ALD6P54115 500 aaKnown RBP4.78□□□□□ -1.64
TSR1YDL060W VPS72Q03388 795 aa4.78□□□□□ -1.64
TSR1YDL060W MCD1Q12158 566 aa4.78□□□□□ -1.64
TSR1YDL060W SMY2P32909 740 aaKnown RBP4.78□□□□□ -1.64
TSR1YDL060W NEM1P38757 446 aa4.78□□□□□ -1.64
TSR1YDL060W FYV10P40492 516 aa4.78□□□□□ -1.64
TSR1YDL060W FAA3P39002 694 aa4.77□□□□□ -1.65
TSR1YDL060W XKS1P42826 600 aa4.77□□□□□ -1.65
TSR1YDL060W INP52P50942 1183 aa4.77□□□□□ -1.65
TSR1YDL060W YGR122WP53272 402 aa4.77□□□□□ -1.65
TSR1YDL060W YPL109CQ02981 657 aa4.77□□□□□ -1.65
TSR1YDL060W HXK1P04806 485 aaKnown RBP4.77□□□□□ -1.65
TSR1YDL060W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65 RIP-Chip
TSR1YDL060W PUB1P32588 453 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
TSR1YDL060W OSW7P43611 510 aa4.77□□□□□ -1.65
TSR1YDL060W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
TSR1YDL060W UTP5Q04177 643 aaKnown RBP4.77□□□□□ -1.65
TSR1YDL060W RPS26AP39938 119 aaKnown RBP4.76□□□□□ -1.65
TSR1YDL060W RPS26BP39939 119 aaKnown RBP4.76□□□□□ -1.65
TSR1YDL060W BRE4Q07660 1125 aa4.76□□□□□ -1.65
TSR1YDL060W PEP7P32609 515 aa4.76□□□□□ -1.65
TSR1YDL060W ALT1P52893 592 aa4.76□□□□□ -1.65
TSR1YDL060W TOS4Q06266 489 aa4.76□□□□□ -1.65
TSR1YDL060W BUD21Q08492 214 aaPredicted RBP4.76□□□□□ -1.65
TSR1YDL060W YGL140CP53120 1219 aa4.75□□□□□ -1.65
TSR1YDL060W TPO2P53283 614 aa4.75□□□□□ -1.65
TSR1YDL060W RET1P22276 1149 aaKnown RBP4.75□□□□□ -1.65
TSR1YDL060W ADD66P36040 267 aa4.75□□□□□ -1.65
TSR1YDL060W VPS16Q03308 798 aa4.75□□□□□ -1.65
TSR1YDL060W TPP1Q03796 238 aa4.75□□□□□ -1.65
TSR1YDL060W RAD2P07276 1031 aa4.74□□□□□ -1.65
TSR1YDL060W SPR28Q04921 423 aa4.74□□□□□ -1.65
TSR1YDL060W NSE3Q05541 303 aa4.74□□□□□ -1.65
TSR1YDL060W YLR257WQ06146 321 aaKnown RBP4.74□□□□□ -1.65
TSR1YDL060W EST2Q06163 884 aa4.74□□□□□ -1.65
TSR1YDL060W HRK1Q08732 759 aaKnown RBP4.74□□□□□ -1.65
TSR1YDL060W MCM2P29469 868 aa4.73□□□□□ -1.65
TSR1YDL060W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65 RIP-Chip
TSR1YDL060W SSF2Q12153 453 aaPredicted RBP4.73□□□□□ -1.65
TSR1YDL060W DED1P06634 604 aaKnown RBP4.73□□□□□ -1.65
TSR1YDL060W SSB1P11484 613 aaKnown RBP4.73□□□□□ -1.65
TSR1YDL060W SSB2P40150 613 aaKnown RBP4.73□□□□□ -1.65
TSR1YDL060W MAD1P40957 749 aa4.73□□□□□ -1.65
TSR1YDL060W SDH1Q00711 640 aa4.73□□□□□ -1.65
TSR1YDL060W RPN4Q03465 531 aa4.73□□□□□ -1.65
TSR1YDL060W PIN2Q12057 282 aa4.73□□□□□ -1.65
TSR1YDL060W TAF13P11747 167 aa4.72□□□□□ -1.65
TSR1YDL060W CYC8P14922 966 aa4.72□□□□□ -1.65
TSR1YDL060W ADP1P25371 1049 aa4.72□□□□□ -1.65
TSR1YDL060W BUD6P41697 788 aa4.72□□□□□ -1.65
TSR1YDL060W VPS53P47061 822 aa4.72□□□□□ -1.65
TSR1YDL060W RKM2Q03942 479 aa4.72□□□□□ -1.65
TSR1YDL060W PUS7Q08647 676 aaKnown RBP4.72□□□□□ -1.65
TSR1YDL060W TRE1Q08919 783 aa4.72□□□□□ -1.65
TSR1YDL060W GCD1P09032 578 aaPredicted RBP4.72□□□□□ -1.65
TSR1YDL060W POB3Q04636 552 aaKnown RBP4.72□□□□□ -1.65
TSR1YDL060W RSA3Q05942 220 aaKnown RBP4.72□□□□□ -1.65
TSR1YDL060W SEC23P15303 768 aaKnown RBP4.71□□□□□ -1.65
TSR1YDL060W EAR1Q03212 550 aa4.71□□□□□ -1.65
TSR1YDL060W ESF1Q06344 628 aaKnown RBP4.71□□□□□ -1.65
TSR1YDL060W WRS1Q12109 432 aaKnown RBP4.71□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms