RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C HXT17P53631 564 aa8.34□□□□□ -1.07
CIT2YCR005C RPS7AP26786 190 aaKnown RBP8.33□□□□□ -1.08
CIT2YCR005C MET1P36150 593 aa8.33□□□□□ -1.08
CIT2YCR005C SLN1P39928 1220 aaPredicted RBP8.33□□□□□ -1.08
CIT2YCR005C EMP47P43555 445 aa8.33□□□□□ -1.08
CIT2YCR005C SSF2Q12153 453 aaPredicted RBP8.33□□□□□ -1.08
CIT2YCR005C RNR2P09938 399 aaKnown RBP8.32□□□□□ -1.08
CIT2YCR005C YIR014WP40570 242 aa8.32□□□□□ -1.08
CIT2YCR005C TRM44Q02648 567 aaKnown RBP8.32□□□□□ -1.08
CIT2YCR005C KAR5Q04746 504 aa8.32□□□□□ -1.08
CIT2YCR005C UTP13Q05946 817 aaKnown RBP8.32□□□□□ -1.08
CIT2YCR005C TIM50Q02776 476 aa8.31□□□□□ -1.08
CIT2YCR005C MRD1Q06106 887 aaKnown RBP8.31□□□□□ -1.08
CIT2YCR005C ESF1Q06344 628 aaKnown RBP8.31□□□□□ -1.08
CIT2YCR005C SNF3P10870 884 aa8.3□□□□□ -1.08
CIT2YCR005C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
CIT2YCR005C LAM4P38800 1345 aa8.3□□□□□ -1.08
CIT2YCR005C RPP2BP02400 110 aaKnown RBP8.29□□□□□ -1.08
CIT2YCR005C CIC1P38779 376 aaKnown RBP8.29□□□□□ -1.08
CIT2YCR005C SPO22P40511 975 aa8.29□□□□□ -1.08
CIT2YCR005C MRX10Q05648 414 aa8.29□□□□□ -1.08
CIT2YCR005C PUS5Q06244 254 aa8.29□□□□□ -1.08
CIT2YCR005C YPR084WQ06821 456 aa8.29□□□□□ -1.08
CIT2YCR005C YPL260WQ08977 551 aa8.29□□□□□ -1.08
CIT2YCR005C ENO1P00924 437 aaKnown RBP8.28□□□□□ -1.08
CIT2YCR005C THS1P04801 734 aaKnown RBP8.28□□□□□ -1.08
CIT2YCR005C IMP2'P32351 346 aa8.28□□□□□ -1.08
CIT2YCR005C FET4P40988 552 aa8.28□□□□□ -1.08
CIT2YCR005C VPS4P52917 437 aa8.28□□□□□ -1.08
CIT2YCR005C SPN1Q06505 410 aaPredicted RBP8.28□□□□□ -1.08
CIT2YCR005C PPM2Q08282 695 aa8.28□□□□□ -1.08
CIT2YCR005C FLO11P08640 1367 aa8.27□□□□□ -1.09
CIT2YCR005C HPR1P17629 752 aaKnown RBP8.27□□□□□ -1.09
CIT2YCR005C CRG1P38892 291 aaRIP-Chip data8.27□□□□□ -1.09not detected
CIT2YCR005C RTS1P38903 757 aa8.27□□□□□ -1.09
CIT2YCR005C ARP5P53946 755 aa8.27□□□□□ -1.09
CIT2YCR005C UFD2P54860 961 aa8.27□□□□□ -1.09
CIT2YCR005C SRS2P12954 1174 aa8.26□□□□□ -1.09
CIT2YCR005C COQ1P18900 473 aa8.26□□□□□ -1.09
CIT2YCR005C PEP3P27801 918 aa8.26□□□□□ -1.09
CIT2YCR005C TRL1P09880 827 aaKnown RBP8.25□□□□□ -1.09
CIT2YCR005C TTI1P36097 1038 aa8.25□□□□□ -1.09
CIT2YCR005C STV1P37296 890 aa8.25□□□□□ -1.09
CIT2YCR005C YGR117CP53270 476 aa8.25□□□□□ -1.09
CIT2YCR005C RPS15Q01855 142 aaKnown RBP8.25□□□□□ -1.09
CIT2YCR005C KEL3Q08979 651 aaPredicted RBP8.25□□□□□ -1.09
CIT2YCR005C PGA3Q12746 312 aaKnown RBP8.25□□□□□ -1.09
CIT2YCR005C PCT1P13259 424 aa8.24□□□□□ -1.09
CIT2YCR005C ISF1P32488 338 aa8.24□□□□□ -1.09
CIT2YCR005C AIM9P40053 627 aaKnown RBP8.24□□□□□ -1.09
CIT2YCR005C MSH4P40965 878 aaPredicted RBP8.24□□□□□ -1.09
CIT2YCR005C EMW1P42842 904 aaKnown RBP8.24□□□□□ -1.09
CIT2YCR005C PCL8Q08966 492 aa8.24□□□□□ -1.09
CIT2YCR005C CBP1P07252 654 aa8.23□□□□□ -1.09
CIT2YCR005C CDC4P07834 779 aa8.23□□□□□ -1.09
CIT2YCR005C MRT4P33201 236 aaKnown RBP8.23□□□□□ -1.09
CIT2YCR005C RER2P35196 286 aa8.23□□□□□ -1.09
CIT2YCR005C EST2Q06163 884 aa8.23□□□□□ -1.09
CIT2YCR005C RAD61Q99359 647 aa8.23□□□□□ -1.09
CIT2YCR005C FLO1P32768 1537 aa8.23□□□□□ -1.09
CIT2YCR005C YLR278CQ05854 1341 aa8.23□□□□□ -1.09
CIT2YCR005C RAS1P01119 309 aa8.22□□□□□ -1.09
CIT2YCR005C ADP1P25371 1049 aa8.22□□□□□ -1.09
CIT2YCR005C VPS8P39702 1274 aa8.22□□□□□ -1.09
CIT2YCR005C VID27P40157 782 aa8.22□□□□□ -1.09
CIT2YCR005C VID28P40547 921 aa8.22□□□□□ -1.09
CIT2YCR005C YKE2P52553 114 aa8.22□□□□□ -1.09
CIT2YCR005C NSG2P53898 299 aa8.22□□□□□ -1.09
CIT2YCR005C PMA1P05030 918 aaKnown RBP8.22□□□□□ -1.09
CIT2YCR005C CHO2P05374 869 aaKnown RBP8.22□□□□□ -1.09
CIT2YCR005C ANP1P32629 500 aa8.22□□□□□ -1.09
CIT2YCR005C YBL028CP38202 106 aa8.22□□□□□ -1.09
CIT2YCR005C YHL050CP38721 697 aa8.22□□□□□ -1.09
CIT2YCR005C NIT1P40447 199 aa8.22□□□□□ -1.09
CIT2YCR005C YFL034WP43564 1073 aa8.22□□□□□ -1.09
CIT2YCR005C ALG2P43636 503 aa8.22□□□□□ -1.09
CIT2YCR005C MTC3P53077 123 aa8.22□□□□□ -1.09
CIT2YCR005C SNU71P53207 620 aaKnown RBP8.22□□□□□ -1.09
CIT2YCR005C HST3P53687 447 aa8.22□□□□□ -1.09
CIT2YCR005C RPL19AP0CX82 189 aaKnown RBP8.21□□□□□ -1.1
CIT2YCR005C RPL19BP0CX83 189 aaPredicted RBP8.21□□□□□ -1.1
CIT2YCR005C GAL2P13181 574 aa8.21□□□□□ -1.1
CIT2YCR005C RIT1P23796 513 aa8.21□□□□□ -1.1
CIT2YCR005C UTP7P40055 554 aaKnown RBP8.21□□□□□ -1.1
CIT2YCR005C YDL124WQ07551 312 aaKnown RBP8.21□□□□□ -1.1
CIT2YCR005C PSK2Q08217 1101 aa8.21□□□□□ -1.1
CIT2YCR005C PRE8P23639 250 aa8.2□□□□□ -1.1
CIT2YCR005C FBP26P32604 452 aa8.2□□□□□ -1.1
CIT2YCR005C OPY1P38271 328 aa8.2□□□□□ -1.1
CIT2YCR005C TPS3P38426 1054 aaKnown RBP8.2□□□□□ -1.1
CIT2YCR005C EAF7P53911 425 aaKnown RBP8.2□□□□□ -1.1
CIT2YCR005C VPS20Q04272 221 aa8.2□□□□□ -1.1
CIT2YCR005C MATALPHA2P0CY08 210 aa8.19□□□□□ -1.1
CIT2YCR005C HMLALPHA2P0CY09 210 aa8.19□□□□□ -1.1
CIT2YCR005C SRM1P21827 482 aa8.19□□□□□ -1.1
CIT2YCR005C RAD53P22216 821 aa8.19□□□□□ -1.1
CIT2YCR005C PEP12P32854 288 aa8.19□□□□□ -1.1
CIT2YCR005C MKS1P34072 584 aa8.19□□□□□ -1.1
CIT2YCR005C VPS24P36095 224 aaKnown RBP8.19□□□□□ -1.1
CIT2YCR005C CST26P38226 397 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms