RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W SSY1Q03770 852 aa7.32□□□□□ -1.24
SLX1YBR228W RNQ1P25367 405 aa7.31□□□□□ -1.24
SLX1YBR228W RPT1P33299 467 aaKnown RBP7.3□□□□□ -1.24
SLX1YBR228W UTP5Q04177 643 aaKnown RBP7.3□□□□□ -1.24
SLX1YBR228W PUS7Q08647 676 aaKnown RBP7.3□□□□□ -1.24
SLX1YBR228W SEC20P28791 383 aa7.29□□□□□ -1.24
SLX1YBR228W HSE1P38753 452 aa7.29□□□□□ -1.24
SLX1YBR228W PTC7P38797 343 aa7.29□□□□□ -1.24
SLX1YBR228W IPL1P38991 367 aa7.29□□□□□ -1.24
SLX1YBR228W ECL1P48235 211 aa7.29□□□□□ -1.24
SLX1YBR228W YLR257WQ06146 321 aaKnown RBP7.29□□□□□ -1.24
SLX1YBR228W TOS4Q06266 489 aa7.29□□□□□ -1.24
SLX1YBR228W LAP2Q10740 671 aa7.29□□□□□ -1.24
SLX1YBR228W PEX28P38848 579 aa7.28□□□□□ -1.24
SLX1YBR228W SWR1Q05471 1514 aa7.27□□□□□ -1.25
SLX1YBR228W GAS1P22146 559 aaKnown RBP7.27□□□□□ -1.25
SLX1YBR228W RET1P22276 1149 aaKnown RBP7.27□□□□□ -1.25
SLX1YBR228W GTS1P40956 396 aa7.27□□□□□ -1.25
SLX1YBR228W TAF7Q05021 590 aa7.27□□□□□ -1.25
SLX1YBR228W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
SLX1YBR228W VMA4P22203 233 aaKnown RBP7.26□□□□□ -1.25
SLX1YBR228W FAA3P39002 694 aa7.26□□□□□ -1.25
SLX1YBR228W PEX7P39108 375 aa7.26□□□□□ -1.25
SLX1YBR228W PRP43P53131 767 aaKnown RBP7.26□□□□□ -1.25
SLX1YBR228W RSA3Q05942 220 aaKnown RBP7.26□□□□□ -1.25
SLX1YBR228W HRK1Q08732 759 aaKnown RBP7.25□□□□□ -1.25
SLX1YBR228W ADI1Q03677 179 aa7.24□□□□□ -1.25
SLX1YBR228W YHL012WP38709 493 aa7.23□□□□□ -1.25
SLX1YBR228W DED1P06634 604 aaKnown RBP7.21□□□□□ -1.26
SLX1YBR228W SLD2P34252 453 aa7.21□□□□□ -1.26
SLX1YBR228W ADD66P36040 267 aa7.21□□□□□ -1.26
SLX1YBR228W UBP5P39944 805 aa7.21□□□□□ -1.26
SLX1YBR228W NIT1P40447 199 aa7.21□□□□□ -1.26
SLX1YBR228W YGL140CP53120 1219 aa7.21□□□□□ -1.26
SLX1YBR228W YPL109CQ02981 657 aa7.21□□□□□ -1.26
SLX1YBR228W LPX1Q12405 387 aaKnown RBP7.21□□□□□ -1.26
SLX1YBR228W YJL045WP47052 634 aa7.2□□□□□ -1.26
SLX1YBR228W HXK1P04806 485 aaKnown RBP7.19□□□□□ -1.26
SLX1YBR228W SEN54Q02825 467 aaPredicted RBP7.19□□□□□ -1.26
SLX1YBR228W HSL1P34244 1518 aa7.18□□□□□ -1.26
SLX1YBR228W QNS1P38795 714 aaKnown RBP7.18□□□□□ -1.26
SLX1YBR228W ORC3P54790 616 aa7.18□□□□□ -1.26
SLX1YBR228W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
SLX1YBR228W EST2Q06163 884 aa7.18□□□□□ -1.26
SLX1YBR228W AIM26P32858 118 aa7.17□□□□□ -1.26
SLX1YBR228W VPS53P47061 822 aa7.17□□□□□ -1.26
SLX1YBR228W FOL2P51601 243 aaKnown RBP7.17□□□□□ -1.26
SLX1YBR228W RKM2Q03942 479 aa7.17□□□□□ -1.26
SLX1YBR228W HEM13P11353 328 aaKnown RBP7.16□□□□□ -1.26
SLX1YBR228W SAM35P14693 329 aa7.16□□□□□ -1.26
SLX1YBR228W SEC23P15303 768 aaKnown RBP7.16□□□□□ -1.26
SLX1YBR228W MDL2P33311 773 aa7.16□□□□□ -1.26
SLX1YBR228W RDH54P38086 958 aa7.16□□□□□ -1.26
SLX1YBR228W ETP1P38748 585 aaKnown RBP7.16□□□□□ -1.26
SLX1YBR228W PIC2P40035 300 aa7.15□□□□□ -1.26
SLX1YBR228W CDA2Q06703 312 aa7.15□□□□□ -1.26
SLX1YBR228W SPT6P23615 1451 aaKnown RBP7.14□□□□□ -1.27
SLX1YBR228W MRPS18P42847 217 aa7.14□□□□□ -1.27
SLX1YBR228W YGR122WP53272 402 aa7.14□□□□□ -1.27
SLX1YBR228W PRE9P23638 258 aaKnown RBP7.13□□□□□ -1.27
SLX1YBR228W GPB2P39717 880 aa7.13□□□□□ -1.27
SLX1YBR228W POL32P47110 350 aa7.13□□□□□ -1.27
SLX1YBR228W MCD1Q12158 566 aa7.13□□□□□ -1.27
SLX1YBR228W PTC5Q12511 572 aa7.13□□□□□ -1.27
SLX1YBR228W TSA1P34760 196 aaKnown RBP7.12□□□□□ -1.27
SLX1YBR228W MGE1P38523 228 aa7.12□□□□□ -1.27
SLX1YBR228W RPS26AP39938 119 aaKnown RBP7.12□□□□□ -1.27
SLX1YBR228W RPS26BP39939 119 aaKnown RBP7.12□□□□□ -1.27
SLX1YBR228W MRPL22P53881 309 aa7.12□□□□□ -1.27
SLX1YBR228W NBA1Q08229 501 aaKnown RBP7.12□□□□□ -1.27
SLX1YBR228W YDL177CQ12257 170 aa7.12□□□□□ -1.27
SLX1YBR228W DNA2P38859 1522 aa7.11□□□□□ -1.27
SLX1YBR228W KIP1P28742 1111 aa7.11□□□□□ -1.27
SLX1YBR228W YSC84P32793 468 aa7.11□□□□□ -1.27
SLX1YBR228W AFG2P32794 780 aa7.11□□□□□ -1.27
SLX1YBR228W COQ4O13525 335 aa7.1□□□□□ -1.27
SLX1YBR228W ALG3P38179 458 aa7.1□□□□□ -1.27
SLX1YBR228W HDA2Q06629 674 aa7.1□□□□□ -1.27
SLX1YBR228W RAD2P07276 1031 aa7.09□□□□□ -1.27
SLX1YBR228W SRO9P25567 434 aaKnown RBP7.09□□□□□ -1.27
SLX1YBR228W AIM3P38266 947 aaKnown RBP7.09□□□□□ -1.27
SLX1YBR228W KOG1P38873 1557 aa7.08□□□□□ -1.28
SLX1YBR228W MCM2P29469 868 aa7.08□□□□□ -1.28
SLX1YBR228W CCZ1P38273 704 aa7.08□□□□□ -1.28
SLX1YBR228W ROD1Q02805 837 aa7.08□□□□□ -1.28
SLX1YBR228W MRL1Q06815 381 aa7.08□□□□□ -1.28
SLX1YBR228W SPA2P23201 1466 aaKnown RBP7.08□□□□□ -1.28
SLX1YBR228W SSN2P38931 1420 aa7.08□□□□□ -1.28
SLX1YBR228W SPS1P08458 490 aa7.07□□□□□ -1.28
SLX1YBR228W CYC8P14922 966 aa7.07□□□□□ -1.28
SLX1YBR228W YKL222CP35995 705 aa7.07□□□□□ -1.28
SLX1YBR228W RAT1Q02792 1006 aaKnown RBP7.07□□□□□ -1.28
SLX1YBR228W YML020WQ03722 664 aa7.07□□□□□ -1.28
SLX1YBR228W RSC58Q07979 502 aa7.07□□□□□ -1.28
SLX1YBR228W TAF13P11747 167 aa7.06□□□□□ -1.28
SLX1YBR228W RCL1Q08096 367 aaPredicted RBP7.06□□□□□ -1.28
SLX1YBR228W SPO21Q12411 609 aa7.06□□□□□ -1.28
SLX1YBR228W ATE1P16639 503 aa7.05□□□□□ -1.28
SLX1YBR228W SNO2P53823 222 aa7.05□□□□□ -1.28
SLX1YBR228W SPR28Q04921 423 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms