RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W THI4P32318 326 aa3.71□□□□□ -1.82
SWD3YBR175W YKL069WP36088 180 aa3.71□□□□□ -1.82
SWD3YBR175W YHR020WP38708 688 aaKnown RBP3.71□□□□□ -1.82
SWD3YBR175W CHZ1P40019 153 aaPredicted RBP3.71□□□□□ -1.82
SWD3YBR175W GIP2P40036 548 aa3.71□□□□□ -1.82
SWD3YBR175W MRPS18P42847 217 aa3.71□□□□□ -1.82
SWD3YBR175W GUP1P53154 560 aa3.71□□□□□ -1.82
SWD3YBR175W TYW3P53177 273 aa3.71□□□□□ -1.82
SWD3YBR175W DAL4Q04895 635 aa3.71□□□□□ -1.82
SWD3YBR175W BSC2Q05611 235 aa3.71□□□□□ -1.82
SWD3YBR175W SOG2Q08817 791 aa3.71□□□□□ -1.82
SWD3YBR175W MCD1Q12158 566 aa3.71□□□□□ -1.82
SWD3YBR175W TY1A-NL1Q12391 440 aaKnown RBP3.71□□□□□ -1.82
SWD3YBR175W PYC2P32327 1180 aaKnown RBP3.7□□□□□ -1.82
SWD3YBR175W SEC6P32844 805 aa3.7□□□□□ -1.82
SWD3YBR175W DUT1P33317 147 aa3.7□□□□□ -1.82
SWD3YBR175W ENP1P38333 483 aaKnown RBP3.7□□□□□ -1.82
SWD3YBR175W TED1P40533 473 aa3.7□□□□□ -1.82
SWD3YBR175W AVT1P47082 602 aa3.7□□□□□ -1.82
SWD3YBR175W CTH1P47976 325 aa3.7□□□□□ -1.82
SWD3YBR175W SOK2P53438 785 aaPredicted RBP3.7□□□□□ -1.82
SWD3YBR175W DNM1P54861 757 aa3.7□□□□□ -1.82
SWD3YBR175W CTR9P89105 1077 aa3.7□□□□□ -1.82
SWD3YBR175W FLC1Q08967 793 aa3.7□□□□□ -1.82
SWD3YBR175W FAL1Q12099 399 aaKnown RBP3.7□□□□□ -1.82
SWD3YBR175W HVG1P0CE11 249 aa3.69□□□□□ -1.82
SWD3YBR175W ERR1P0CX10 437 aa3.69□□□□□ -1.82
SWD3YBR175W ERR2P0CX11 437 aa3.69□□□□□ -1.82
SWD3YBR175W PUB1P32588 453 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82 RIP-Chip
SWD3YBR175W SAF1P38352 637 aa3.69□□□□□ -1.82
SWD3YBR175W RSP5P39940 809 aaKnown RBP3.69□□□□□ -1.82
SWD3YBR175W YGR053CP53234 283 aa3.69□□□□□ -1.82
SWD3YBR175W ECM16Q04217 1267 aaKnown RBP3.69□□□□□ -1.82
SWD3YBR175W YDL121CQ07541 149 aa3.69□□□□□ -1.82
SWD3YBR175W INP54Q08227 384 aaKnown RBP3.69□□□□□ -1.82
SWD3YBR175W NOP14Q99207 810 aaKnown RBP3.69□□□□□ -1.82
SWD3YBR175W ADR1P07248 1323 aa3.69□□□□□ -1.82
SWD3YBR175W KAR1P11927 433 aa3.68□□□□□ -1.82
SWD3YBR175W GAL11P19659 1081 aa3.68□□□□□ -1.82
SWD3YBR175W MRC1P25588 1096 aa3.68□□□□□ -1.82
SWD3YBR175W PRP40P33203 583 aaKnown RBP3.68□□□□□ -1.82
SWD3YBR175W TFA2P36145 328 aa3.68□□□□□ -1.82
SWD3YBR175W TOS1P38288 455 aa3.68□□□□□ -1.82
SWD3YBR175W PAF1P38351 445 aa3.68□□□□□ -1.82
SWD3YBR175W YJL181WP46987 611 aa3.68□□□□□ -1.82
SWD3YBR175W YGR125WP53273 1036 aa3.68□□□□□ -1.82
SWD3YBR175W DSE4P53753 1117 aa3.68□□□□□ -1.82
SWD3YBR175W FOL1P53848 824 aa3.68□□□□□ -1.82
SWD3YBR175W MSH6Q03834 1242 aa3.68□□□□□ -1.82
SWD3YBR175W GLO4Q12320 285 aa3.68□□□□□ -1.82
SWD3YBR175W FLP1P03870 423 aa3.67□□□□□ -1.82
SWD3YBR175W PRP5P21372 849 aaPredicted RBP3.67□□□□□ -1.82
SWD3YBR175W BAS1P22035 811 aa3.67□□□□□ -1.82
SWD3YBR175W RAD27P26793 382 aa3.67□□□□□ -1.82
SWD3YBR175W MCM5P29496 775 aaKnown RBP3.67□□□□□ -1.82
SWD3YBR175W YNR029CP53729 429 aaKnown RBP3.67□□□□□ -1.82
SWD3YBR175W YNR065CP53751 1116 aa3.67□□□□□ -1.82
SWD3YBR175W MDG1P53885 366 aa3.67□□□□□ -1.82
SWD3YBR175W YPL109CQ02981 657 aa3.67□□□□□ -1.82
SWD3YBR175W YCS4Q06156 1176 aa3.67□□□□□ -1.82
SWD3YBR175W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SWD3YBR175W REC8Q12188 680 aa3.67□□□□□ -1.82
SWD3YBR175W OSH2Q12451 1283 aa3.67□□□□□ -1.82
SWD3YBR175W COBP00163 385 aa3.66□□□□□ -1.82
SWD3YBR175W CHS2P14180 963 aa3.66□□□□□ -1.82
SWD3YBR175W KAR2P16474 682 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W VMA4P22203 233 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W PWP2P25635 923 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W NAM7P30771 971 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W UGA4P32837 571 aa3.66□□□□□ -1.82
SWD3YBR175W STE5P32917 917 aa3.66□□□□□ -1.82
SWD3YBR175W VPS24P36095 224 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W FUI1P38196 639 aa3.66□□□□□ -1.82
SWD3YBR175W ECM2P38241 364 aaKnown RBP3.66□□□□□ -1.82
SWD3YBR175W YBR184WP38299 523 aa3.66□□□□□ -1.82
SWD3YBR175W RIM11P38615 370 aa3.66□□□□□ -1.82
SWD3YBR175W SAP155P43612 1002 aa3.66□□□□□ -1.82
SWD3YBR175W YJR124CP47159 448 aa3.66□□□□□ -1.82
SWD3YBR175W PEX8P53248 589 aa3.66□□□□□ -1.82
SWD3YBR175W YGR130CP53278 816 aa3.66□□□□□ -1.82
SWD3YBR175W CEF1Q03654 590 aaPredicted RBP3.66□□□□□ -1.82
SWD3YBR175W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SWD3YBR175W BRE4Q07660 1125 aa3.66□□□□□ -1.82
SWD3YBR175W SPO75Q07798 868 aa3.66□□□□□ -1.82
SWD3YBR175W NTG2Q08214 380 aa3.66□□□□□ -1.82
SWD3YBR175W CAN1P04817 590 aa3.65□□□□□ -1.83
SWD3YBR175W GCR1P07261 785 aa3.65□□□□□ -1.83
SWD3YBR175W RPL8AP17076 256 aaKnown RBP3.65□□□□□ -1.83
SWD3YBR175W LIP5P32875 414 aa3.65□□□□□ -1.83
SWD3YBR175W PAN5P38787 379 aa3.65□□□□□ -1.83
SWD3YBR175W GGA2P38817 585 aaKnown RBP3.65□□□□□ -1.83
SWD3YBR175W POL5P39985 1022 aaKnown RBP3.65□□□□□ -1.83
SWD3YBR175W PIC2P40035 300 aa3.65□□□□□ -1.83
SWD3YBR175W ULP1Q02724 621 aa3.65□□□□□ -1.83
SWD3YBR175W EEB1Q02891 456 aa3.65□□□□□ -1.83
SWD3YBR175W SPO71Q03868 1245 aa3.65□□□□□ -1.83
SWD3YBR175W TMA64Q04600 565 aaKnown RBP3.65□□□□□ -1.83
SWD3YBR175W AOS1Q06624 347 aa3.65□□□□□ -1.83
SWD3YBR175W RTT10Q08924 1013 aa3.65□□□□□ -1.83
SWD3YBR175W CIT1P00890 479 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms