RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	AGP1	P25376	633 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	SBA1	P28707	216 aa	Known RBP	5.74	□□□□□ -1.49
SHE3	YBR130C	LYP1	P32487	611 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	ALG14	P38242	237 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	NUP82	P40368	713 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	YJR124C	P47159	448 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	SHE9	Q04172	456 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	SLP1	Q12232	587 aa		5.74	□□□□□ -1.49
SHE3	YBR130C	HVG1	P0CE11	249 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	PHO8	P11491	566 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	NAR1	P23503	491 aa	Known RBP	5.73	□□□□□ -1.49
SHE3	YBR130C	MAC1	P35192	417 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	PGM2	P37012	569 aa	Known RBP	5.73	□□□□□ -1.49
SHE3	YBR130C	TAT2	P38967	592 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	IRR1	P40541	1150 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	FET4	P40988	552 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	MTR4	P47047	1073 aa	Known RBP	5.73	□□□□□ -1.49
SHE3	YBR130C	YGR125W	P53273	1036 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	HDA2	Q06629	674 aa		5.73	□□□□□ -1.49
SHE3	YBR130C	TRP2	P00899	507 aa	Known RBP	5.72	□□□□□ -1.49
SHE3	YBR130C	HSP60	P19882	572 aa	Known RBP	5.72	□□□□□ -1.49
SHE3	YBR130C	ERP6	P53198	216 aa		5.72	□□□□□ -1.49
SHE3	YBR130C	SOK2	P53438	785 aa	Predicted RBP	5.72	□□□□□ -1.49
SHE3	YBR130C	EEB1	Q02891	456 aa		5.72	□□□□□ -1.49
SHE3	YBR130C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
SHE3	YBR130C	FLC1	Q08967	793 aa		5.72	□□□□□ -1.49
SHE3	YBR130C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	RIP-Chip
SHE3	YBR130C	YKL069W	P36088	180 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	MNN1	P39106	762 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	GIP2	P40036	548 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	NEO1	P40527	1151 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	MSH4	P40965	878 aa	Predicted RBP	5.71	□□□□□ -1.5
SHE3	YBR130C	HUL4	P40985	892 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	YNR065C	P53751	1116 aa		5.71	□□□□□ -1.5
SHE3	YBR130C	PRP9	P19736	530 aa	Known RBP	5.7	□□□□□ -1.5
SHE3	YBR130C	THI4	P32318	326 aa		5.7	□□□□□ -1.5
SHE3	YBR130C	PBY1	P38254	753 aa		5.7	□□□□□ -1.5
SHE3	YBR130C	YBR184W	P38299	523 aa		5.7	□□□□□ -1.5
SHE3	YBR130C	GNP1	P48813	663 aa		5.7	□□□□□ -1.5
SHE3	YBR130C	BUD9	P53226	547 aa		5.7	□□□□□ -1.5
SHE3	YBR130C	HTS1	P07263	546 aa	Known RBP	5.69	□□□□□ -1.5
SHE3	YBR130C	TIM23	P32897	222 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
SHE3	YBR130C	RER2	P35196	286 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	ARL1	P38116	183 aa	Known RBP	5.69	□□□□□ -1.5
SHE3	YBR130C	EXO5	P38289	585 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	RSP5	P39940	809 aa	Known RBP	5.69	□□□□□ -1.5
SHE3	YBR130C	HAS1	Q03532	505 aa	Known RBP	5.69	□□□□□ -1.5
SHE3	YBR130C	SPO71	Q03868	1245 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	EST2	Q06163	884 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	EAF1	Q06337	982 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	RKM4	Q12504	494 aa		5.69	□□□□□ -1.5
SHE3	YBR130C	CIT1	P00890	479 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	SAC7	P17121	654 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	TSR4	P25040	408 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	ARE1	P25628	610 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	RPL8B	P29453	256 aa	Known RBP	5.68	□□□□□ -1.5
SHE3	YBR130C	RDH54	P38086	958 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	YHR020W	P38708	688 aa	Known RBP	5.68	□□□□□ -1.5
SHE3	YBR130C	PAN5	P38787	379 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	TED1	P40533	473 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	UTP22	P53254	1237 aa	Predicted RBP	5.68	□□□□□ -1.5
SHE3	YBR130C	TPO2	P53283	614 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	PPM2	Q08282	695 aa		5.68	□□□□□ -1.5
SHE3	YBR130C	AI3	P03877	415 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	DED1	P06634	604 aa	Known RBP	5.67	□□□□□ -1.5
SHE3	YBR130C	SYP1	P25623	870 aa	Known RBP	5.67	□□□□□ -1.5
SHE3	YBR130C	YKL107W	P34251	309 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	ADD66	P36040	267 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	VBA5	P36172	582 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	HXT13	P39924	564 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	HXT17	P53631	564 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	HXT15	P54854	567 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	ROD1	Q02805	837 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	RKM2	Q03942	479 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	FMP25	Q08023	583 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	YIG1	Q08956	461 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	YLL054C	Q12244	843 aa		5.67	□□□□□ -1.5
SHE3	YBR130C	INO1	P11986	533 aa		5.66	□□□□□ -1.5
SHE3	YBR130C	ABD1	P32783	436 aa	Predicted RBP	5.66	□□□□□ -1.5
SHE3	YBR130C	YDL124W	Q07551	312 aa	Known RBP	5.66	□□□□□ -1.5
SHE3	YBR130C	GAS5	Q08193	484 aa		5.66	□□□□□ -1.5
SHE3	YBR130C	LAP2	Q10740	671 aa		5.66	□□□□□ -1.5
SHE3	YBR130C	GLT1	Q12680	2145 aa	Known RBP	5.65	□□□□□ -1.5
SHE3	YBR130C	TY4B-P	A0A0B7P3V8	1104 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	MKK2	P32491	506 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	OMA1	P36163	345 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	CNN1	P43618	361 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	GCV1	P48015	400 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	ALO1	P54783	526 aa	Known RBP	5.65	□□□□□ -1.5
SHE3	YBR130C	YLR225C	Q05948	407 aa	Known RBP	5.65	□□□□□ -1.5
SHE3	YBR130C	TY4A-H	Q6Q5P6	413 aa		5.65	□□□□□ -1.5
SHE3	YBR130C	CAN1	P04817	590 aa		5.64	□□□□□ -1.51
SHE3	YBR130C	SSB1	P11484	613 aa	Known RBP	5.64	□□□□□ -1.51
SHE3	YBR130C	DBP5	P20449	482 aa	Known RBP	5.64	□□□□□ -1.51
SHE3	YBR130C	SFP1	P32432	683 aa		5.64	□□□□□ -1.51
SHE3	YBR130C	CDC11	P32458	415 aa		5.64	□□□□□ -1.51
SHE3	YBR130C	STE5	P32917	917 aa		5.64	□□□□□ -1.51
SHE3	YBR130C	PGM1	P33401	570 aa	Known RBP	5.64	□□□□□ -1.51
SHE3	YBR130C	TOM20	P35180	183 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 71.9 ms