RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YJR124C	P47159	448 aa		5.87	□□□□□ -1.47
SHE1	YBL031W	GUP1	P53154	560 aa		5.87	□□□□□ -1.47
SHE1	YBL031W	GDE1	Q02979	1223 aa		5.87	□□□□□ -1.47
SHE1	YBL031W	RAD27	P26793	382 aa		5.86	□□□□□ -1.47
SHE1	YBL031W	ELM1	P32801	640 aa		5.86	□□□□□ -1.47
SHE1	YBL031W	DUT1	P33317	147 aa		5.86	□□□□□ -1.47
SHE1	YBL031W	XKS1	P42826	600 aa		5.86	□□□□□ -1.47
SHE1	YBL031W	KRI1	P42846	591 aa	Known RBP	5.86	□□□□□ -1.47
SHE1	YBL031W	MRL1	Q06815	381 aa		5.86	□□□□□ -1.47
SHE1	YBL031W	GCR1	P07261	785 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	MSH3	P25336	1018 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	RNQ1	P25367	405 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	FAA4	P47912	694 aa	Known RBP	5.85	□□□□□ -1.47
SHE1	YBL031W	YGL140C	P53120	1219 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	YGR053C	P53234	283 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	YNR065C	P53751	1116 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	PEX13	P80667	386 aa		5.85	□□□□□ -1.47
SHE1	YBL031W	HTS1	P07263	546 aa	Known RBP	5.84	□□□□□ -1.47
SHE1	YBL031W	VMA4	P22203	233 aa	Known RBP	5.84	□□□□□ -1.47
SHE1	YBL031W	MAE1	P36013	669 aa	Known RBP	5.84	□□□□□ -1.47
SHE1	YBL031W	YKL077W	P36081	392 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	UBP5	P39944	805 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	GNP1	P48813	663 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	SIW14	P53965	281 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	SDH1	Q00711	640 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	YIG1	Q08956	461 aa		5.84	□□□□□ -1.47
SHE1	YBL031W	MSB1	P21339	1137 aa	Known RBP	5.83	□□□□□ -1.48
SHE1	YBL031W	ARL1	P38116	183 aa	Known RBP	5.83	□□□□□ -1.48
SHE1	YBL031W	EXO5	P38289	585 aa		5.83	□□□□□ -1.48
SHE1	YBL031W	MYO2	P19524	1574 aa	Known RBP	5.82	□□□□□ -1.48
SHE1	YBL031W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.82	□□□□□ -1.48	not detected
SHE1	YBL031W	RDH54	P38086	958 aa		5.82	□□□□□ -1.48
SHE1	YBL031W	NEO1	P40527	1151 aa		5.82	□□□□□ -1.48
SHE1	YBL031W	HAS1	Q03532	505 aa	Known RBP	5.82	□□□□□ -1.48
SHE1	YBL031W	HDA2	Q06629	674 aa		5.82	□□□□□ -1.48
SHE1	YBL031W	MMS22	Q06164	1454 aa		5.82	□□□□□ -1.48
SHE1	YBL031W	BUD4	P47136	1447 aa		5.82	□□□□□ -1.48
SHE1	YBL031W	SSK2	P53599	1579 aa		5.81	□□□□□ -1.48
SHE1	YBL031W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.81	□□□□□ -1.48	not detected
SHE1	YBL031W	MTR4	P47047	1073 aa	Known RBP	5.81	□□□□□ -1.48
SHE1	YBL031W	UTP22	P53254	1237 aa	Predicted RBP	5.81	□□□□□ -1.48
SHE1	YBL031W	NSE3	Q05541	303 aa		5.81	□□□□□ -1.48
SHE1	YBL031W	OPI10	Q08202	246 aa		5.81	□□□□□ -1.48
SHE1	YBL031W	FAL1	Q12099	399 aa	Known RBP	5.81	□□□□□ -1.48
SHE1	YBL031W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-DR6	P0CX70	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-ER1	P0CX71	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-LR2	P0CX72	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-PL	P0CX73	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-JR1	P0CX74	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-LR3	P0CX75	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-ML2	P0CX76	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	SRP40	P32583	406 aa	Predicted RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	IOC3	P43596	787 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	OSW7	P43611	510 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	GCV1	P48015	400 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	NCE103	P53615	221 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	EEB1	Q02891	456 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	NAN1	Q02931	896 aa	Known RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	SPO71	Q03868	1245 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TDA5	Q06417	326 aa	Known RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-GR1	Q12085	440 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	TY1A-OL	Q92392	440 aa	Known RBP	5.8	□□□□□ -1.48
SHE1	YBL031W	KOG1	P38873	1557 aa		5.8	□□□□□ -1.48
SHE1	YBL031W	POL1	P13382	1468 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	SEG2	P34250	1132 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	HXT13	P39924	564 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	POL5	P39985	1022 aa	Known RBP	5.79	□□□□□ -1.48
SHE1	YBL031W	SPF1	P39986	1215 aa	Known RBP	5.79	□□□□□ -1.48
SHE1	YBL031W	HXT17	P53631	564 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	HXT15	P54854	567 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	SPO20	Q04359	397 aa		5.79	□□□□□ -1.48
SHE1	YBL031W	TRP2	P00899	507 aa	Known RBP	5.78	□□□□□ -1.48
SHE1	YBL031W	HEM13	P11353	328 aa	Known RBP	5.78	□□□□□ -1.48
SHE1	YBL031W	LYP1	P32487	611 aa		5.78	□□□□□ -1.48
SHE1	YBL031W	YKL091C	P33324	310 aa	Known RBP	5.78	□□□□□ -1.48
SHE1	YBL031W	POL12	P38121	705 aa	Predicted RBP	5.78	□□□□□ -1.48
SHE1	YBL031W	SEA4	P38164	1038 aa		5.78	□□□□□ -1.48
SHE1	YBL031W	NMD2	P38798	1089 aa	Known RBP	5.78	□□□□□ -1.48
SHE1	YBL031W	RKM2	Q03942	479 aa		5.78	□□□□□ -1.48
SHE1	YBL031W	ELG1	Q12050	791 aa		5.78	□□□□□ -1.48
SHE1	YBL031W	YLL054C	Q12244	843 aa		5.78	□□□□□ -1.48
SHE1	YBL031W	YPK9	Q12697	1472 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	ECM5	Q03214	1411 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	PRI2	P20457	528 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	GRX1	P25373	110 aa	Known RBP	5.77	□□□□□ -1.49
SHE1	YBL031W	LRG1	P35688	1017 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	ATG14	P38270	344 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	NEM1	P38757	446 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	SNF7	P39929	240 aa	Known RBP	5.77	□□□□□ -1.49
SHE1	YBL031W	TYW3	P53177	273 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	MEC3	Q02574	474 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	RPN4	Q03465	531 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
SHE1	YBL031W	EST2	Q06163	884 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	GIC2	Q06648	383 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	BDF2	Q07442	638 aa		5.77	□□□□□ -1.49
SHE1	YBL031W	CDC53	Q12018	815 aa	Known RBP	5.77	□□□□□ -1.49
SHE1	YBL031W	YOR131C	Q12486	218 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms