RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 IBTKQ9P2D0 1353 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
TNFRSF11A-205ENST00000616710 PALD1Q9ULE6 856 aa16.69■□□□□ 0.26
TNFRSF11A-205ENST00000616710 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
TNFRSF11A-205ENST00000616710 KIAA1524Q8TCG1 905 aa16.69■□□□□ 0.26
TNFRSF11A-205ENST00000616710 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
TNFRSF11A-205ENST00000616710 TPM3P06753 285 aa16.68■□□□□ 0.26
TNFRSF11A-205ENST00000616710 F6X3S4 739 aa16.68■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
TNFRSF11A-205ENST00000616710 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
TNFRSF11A-205ENST00000616710 PIK3C2GO75747 1445 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 ANO6Q4KMQ2 910 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 TCEANC2Q96MN5 208 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 RSPH14Q9UHP6 348 aa16.67■□□□□ 0.26
TNFRSF11A-205ENST00000616710 STX6O43752 255 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MCM2P49736 904 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 UBE2HP62256 183 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 GPS2Q13227 327 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 SIRT2Q8IXJ6 389 aa16.66■□□□□ 0.26
TNFRSF11A-205ENST00000616710 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 BRD1O95696 1058 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 ZNF165P49910 485 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 GABPB1Q06547 395 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 NUTM1Q86Y26 1132 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 MEIS3Q99687 375 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 SMC2O95347 1197 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 TERF2Q15554 542 aa16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
TNFRSF11A-205ENST00000616710 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SKILP12757 684 aa16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 DACT1Q9NYF0 836 aa16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF11A-205ENST00000616710 A0A087WWV3 80 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 CASTP20810 708 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 LMAN1P49257 510 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 H3BQV1 296 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 UBXN4Q92575 508 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 HNRNPH2P55795 449 aaKnown RBP16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 GNAI1P63096 354 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ERCC6LQ2NKX8 1250 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 KCNF1Q9H3M0 494 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 CTNNA3Q9UI47 895 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 A2MP01023 1474 aa16.63■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ARGLU1Q9NWB6 273 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SYT1P21579 422 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
TNFRSF11A-205ENST00000616710 URI1O94763 535 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 GJB2P29033 226 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 GTF2A1P52655 376 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 TYRO3Q06418 890 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 KRT85P78386 507 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ARHGAP29Q52LW3 1261 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF11A-205ENST00000616710 MLECQ14165 292 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 SPATA32Q96LK8 384 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 JAKMIP1Q96N16 626 aaKnown RBP16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 GPATCH8Q9UKJ3 1502 aaKnown RBP16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 PAXBP1Q9Y5B6 917 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 PTPRGP23470 1445 aa16.6■□□□□ 0.25
TNFRSF11A-205ENST00000616710 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms