RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 ANKRD44Q8N8A2 993 aa9□□□□□ -0.97
SMG1-210ENST00000565224 RBM42Q9BTD8 480 aaKnown RBP9□□□□□ -0.97
SMG1-210ENST00000565224 RGS12O14924 1447 aa9□□□□□ -0.97
SMG1-210ENST00000565224 ATP10DQ9P241 1426 aa9□□□□□ -0.97
SMG1-210ENST00000565224 KIAA0232Q92628 1395 aa9□□□□□ -0.97
SMG1-210ENST00000565224 PRR36Q9H6K5 1346 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 CHL1O00533 1208 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
SMG1-210ENST00000565224 RABEP1Q15276 862 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 SULT6B1Q6IMI4 303 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 RPAP2Q8IXW5 612 aaPredicted RBP8.99□□□□□ -0.97
SMG1-210ENST00000565224 FOXD4L1Q9NU39 408 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
SMG1-210ENST00000565224 ITSN1Q15811 1721 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 PTPRCP08575 1304 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 CEP85Q6P2H3 762 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 GAS2L2Q8NHY3 880 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 TTC21BQ7Z4L5 1316 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 HSPA2P54652 639 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 KRT24Q2M2I5 525 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 CLEC17AQ6ZS10 378 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 MSH6P52701 1360 aa8.98□□□□□ -0.97
SMG1-210ENST00000565224 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 GOLGA6L22H0YM25 854 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 SSFA2P28290 1259 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 MCM10Q7L590 875 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 C16orf71Q8IYS4 520 aaPredicted RBP8.97□□□□□ -0.97
SMG1-210ENST00000565224 RTL1A6NKG5 1358 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 CASC1Q6TDU7 716 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 USP26Q9BXU7 913 aa8.97□□□□□ -0.97
SMG1-210ENST00000565224 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
SMG1-210ENST00000565224 CLCN1P35523 988 aa8.96□□□□□ -0.98
SMG1-210ENST00000565224 OTUD7AQ8TE49 926 aaPredicted RBP8.96□□□□□ -0.98
SMG1-210ENST00000565224 SETD1BQ9UPS6 1966 aaKnown RBP8.96□□□□□ -0.98
SMG1-210ENST00000565224 SDSP20132 328 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 GAS2L3Q86XJ1 694 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 MEIS3Q99687 375 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 CRB1P82279 1406 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 ACEP12821 1306 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 USP31Q70CQ4 1352 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 TNRQ92752 1358 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 TMEM2Q9UHN6 1383 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 USP6P35125 1406 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 ARHGEF10O15013 1369 aa8.95□□□□□ -0.98
SMG1-210ENST00000565224 SMARCA5O60264 1052 aaPredicted RBP8.94□□□□□ -0.98
SMG1-210ENST00000565224 HMMRO75330 724 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 BAG4O95429 457 aaKnown RBP8.94□□□□□ -0.98
SMG1-210ENST00000565224 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 NUCB2P80303 420 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 HSP90AB2PQ58FF8 381 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 UBE2Q2Q8WVN8 375 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 APBB1O00213 710 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 KLHL40Q2TBA0 621 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 TOPAZ1Q8N9V7 1692 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 RGPD1P0DJD0 1748 aa8.94□□□□□ -0.98
SMG1-210ENST00000565224 IBTKQ9P2D0 1353 aaPredicted RBP8.94□□□□□ -0.98
SMG1-210ENST00000565224 ADAMTS13Q76LX8 1427 aa8.93□□□□□ -0.98
SMG1-210ENST00000565224 ST18O60284 1047 aa8.93□□□□□ -0.98
SMG1-210ENST00000565224 REC8O95072 547 aa8.93□□□□□ -0.98
SMG1-210ENST00000565224 PEAK1Q9H792 1746 aa8.93□□□□□ -0.98
SMG1-210ENST00000565224 NALCNQ8IZF0 1738 aa8.93□□□□□ -0.98
SMG1-210ENST00000565224 CCT4P50991 539 aaKnown RBP8.93□□□□□ -0.98
SMG1-210ENST00000565224 CWC22Q9HCG8 908 aaKnown RBP8.93□□□□□ -0.98
SMG1-210ENST00000565224 ESPNB1AK53 854 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 ERC2O15083 957 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
SMG1-210ENST00000565224 RTF1Q92541 710 aaKnown RBP8.92□□□□□ -0.98
SMG1-210ENST00000565224 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
SMG1-210ENST00000565224 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 TSPYL4Q9UJ04 414 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 DDX49Q9Y6V7 483 aaKnown RBP8.92□□□□□ -0.98
SMG1-210ENST00000565224 MAP3K19Q56UN5 1328 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 MIS18AQ9NYP9 233 aa8.92□□□□□ -0.98
SMG1-210ENST00000565224 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.92□□□□□ -0.98
SMG1-210ENST00000565224 SSH2Q76I76 1423 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 NUTM2FA1L443 756 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 MTHFSDQ2M296 383 aaKnown RBP8.91□□□□□ -0.98
SMG1-210ENST00000565224 SLC4A10Q6U841 1118 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 G2E3Q7L622 706 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 TTC21AQ8NDW8 1320 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 FLT4P35916 1363 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 PLEKHG1Q9ULL1 1385 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 SOX12O15370 315 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 FOXO3O43524 673 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 GNAI2P04899 355 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 PDE1AP54750 535 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 SBNO1A3KN83 1393 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 KDRP35968 1356 aa8.91□□□□□ -0.98
SMG1-210ENST00000565224 UBR1Q8IWV7 1749 aa8.9□□□□□ -0.98
SMG1-210ENST00000565224 F6X3S4 739 aa8.9□□□□□ -0.98
SMG1-210ENST00000565224 NASPP49321 788 aaPredicted RBP8.9□□□□□ -0.98
SMG1-210ENST00000565224 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.98
SMG1-210ENST00000565224 ERBB4Q15303 1308 aa8.9□□□□□ -0.99
SMG1-210ENST00000565224 ZNF445P59923 1031 aa8.9□□□□□ -0.99
SMG1-210ENST00000565224 NAP1L5Q96NT1 182 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms