RNA–Protein interactions for RNA: ENST00000564648.1

COX4I1-207, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-207ENST00000564648 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
COX4I1-207ENST00000564648 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
COX4I1-207ENST00000564648 PXDNQ92626 1479 aa11.67□□□□□ -0.54
COX4I1-207ENST00000564648 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
COX4I1-207ENST00000564648 SLIT2O94813 1529 aa11.66□□□□□ -0.54
COX4I1-207ENST00000564648 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
COX4I1-207ENST00000564648 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
COX4I1-207ENST00000564648 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
COX4I1-207ENST00000564648 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
COX4I1-207ENST00000564648 SBNO1A3KN83 1393 aa11.66□□□□□ -0.54
COX4I1-207ENST00000564648 USP19O94966 1318 aa11.65□□□□□ -0.54
COX4I1-207ENST00000564648 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
COX4I1-207ENST00000564648 ZNF521Q96K83 1311 aa11.65□□□□□ -0.54
COX4I1-207ENST00000564648 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
COX4I1-207ENST00000564648 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
COX4I1-207ENST00000564648 SLIT3O75094 1523 aa11.65□□□□□ -0.55
COX4I1-207ENST00000564648 NFAT5O94916 1531 aa11.65□□□□□ -0.55
COX4I1-207ENST00000564648 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-207ENST00000564648 APAF1O14727 1248 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 PPM1GO15355 546 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-207ENST00000564648 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-207ENST00000564648 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
COX4I1-207ENST00000564648 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 ALS2Q96Q42 1657 aa11.64□□□□□ -0.55
COX4I1-207ENST00000564648 EIF4A2Q14240 407 aaKnown RBP11.63□□□□□ -0.55
COX4I1-207ENST00000564648 HSP90AB2PQ58FF8 381 aa11.63□□□□□ -0.55
COX4I1-207ENST00000564648 KIF24Q5T7B8 1368 aa11.63□□□□□ -0.55
COX4I1-207ENST00000564648 U2SURPO15042 1029 aaKnown RBP11.62□□□□□ -0.55
COX4I1-207ENST00000564648 SOX12O15370 315 aa11.62□□□□□ -0.55
COX4I1-207ENST00000564648 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
COX4I1-207ENST00000564648 SALL2Q9Y467 1007 aaPredicted RBP11.62□□□□□ -0.55
COX4I1-207ENST00000564648 FLT4P35916 1363 aa11.62□□□□□ -0.55
COX4I1-207ENST00000564648 FCHSD2O94868 740 aa11.61□□□□□ -0.55
COX4I1-207ENST00000564648 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
COX4I1-207ENST00000564648 SEPT12Q8IYM1 358 aa11.61□□□□□ -0.55
COX4I1-207ENST00000564648 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
COX4I1-207ENST00000564648 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 MAP3K13O43283 966 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 HOXC9P31274 260 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 BAG6P46379 1132 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
COX4I1-207ENST00000564648 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
COX4I1-207ENST00000564648 GCP02774 474 aa11.59□□□□□ -0.55
COX4I1-207ENST00000564648 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
COX4I1-207ENST00000564648 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
COX4I1-207ENST00000564648 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
COX4I1-207ENST00000564648 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
COX4I1-207ENST00000564648 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
COX4I1-207ENST00000564648 AMPHP49418 695 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
COX4I1-207ENST00000564648 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 KRT27Q7Z3Y8 459 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
COX4I1-207ENST00000564648 IP6K1Q92551 441 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
COX4I1-207ENST00000564648 ONECUT3O60422 494 aaPredicted RBP11.57□□□□□ -0.56
COX4I1-207ENST00000564648 HMOX1P09601 288 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 PSEN1P49768 467 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 VPS72Q15906 364 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 TRMT2AQ8IZ69 625 aaKnown RBP11.57□□□□□ -0.56
COX4I1-207ENST00000564648 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
COX4I1-207ENST00000564648 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
COX4I1-207ENST00000564648 ARHGEF10O15013 1369 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 YY1P25490 414 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
COX4I1-207ENST00000564648 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
COX4I1-207ENST00000564648 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
COX4I1-207ENST00000564648 KDRP35968 1356 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 SLFN5Q08AF3 891 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
COX4I1-207ENST00000564648 EYA1Q99502 592 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
COX4I1-207ENST00000564648 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
COX4I1-207ENST00000564648 LTN1O94822 1766 aa11.54□□□□□ -0.56
COX4I1-207ENST00000564648 DISP2A7MBM2 1401 aa11.54□□□□□ -0.56
COX4I1-207ENST00000564648 DUSP27Q5VZP5 1158 aa11.54□□□□□ -0.56
COX4I1-207ENST00000564648 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
COX4I1-207ENST00000564648 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
COX4I1-207ENST00000564648 EN1Q05925 392 aaPredicted RBP11.53□□□□□ -0.56
COX4I1-207ENST00000564648 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
COX4I1-207ENST00000564648 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms