RNA–Protein interactions for RNA: ENST00000558246.1

AC087477.5-201, humanhuman

TSL 3 BASIC

Gene AC087477.5, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.5-201ENST00000558246 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
AC087477.5-201ENST00000558246 CEP170BQ9Y4F5 1589 aaPredicted RBP11.37□□□□□ -0.59
AC087477.5-201ENST00000558246 RIMS2Q9UQ26 1411 aa11.37□□□□□ -0.59
AC087477.5-201ENST00000558246 ZKSCAN2Q63HK3 967 aa11.37□□□□□ -0.59
AC087477.5-201ENST00000558246 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
AC087477.5-201ENST00000558246 FYB1O15117 783 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 BCAR3O75815 825 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 BECN1Q14457 450 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 CD163L1Q9NR16 1453 aa11.36□□□□□ -0.59
AC087477.5-201ENST00000558246 TMPOP42166 694 aaKnown RBP11.35□□□□□ -0.59
AC087477.5-201ENST00000558246 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
AC087477.5-201ENST00000558246 PLEKHF1Q96S99 279 aa11.35□□□□□ -0.59
AC087477.5-201ENST00000558246 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
AC087477.5-201ENST00000558246 CPS1P31327 1500 aa11.35□□□□□ -0.59
AC087477.5-201ENST00000558246 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 CDK19Q9BWU1 502 aa11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 CPSF1Q10570 1443 aaKnown RBP11.34□□□□□ -0.59
AC087477.5-201ENST00000558246 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
AC087477.5-201ENST00000558246 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
AC087477.5-201ENST00000558246 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
AC087477.5-201ENST00000558246 DZIP1LQ8IYY4 767 aaKnown RBP11.33□□□□□ -0.6
AC087477.5-201ENST00000558246 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
AC087477.5-201ENST00000558246 MON2Q7Z3U7 1717 aa11.32□□□□□ -0.6
AC087477.5-201ENST00000558246 AKAP12Q02952 1782 aa11.32□□□□□ -0.6
AC087477.5-201ENST00000558246 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
AC087477.5-201ENST00000558246 KIF24Q5T7B8 1368 aa11.31□□□□□ -0.6
AC087477.5-201ENST00000558246 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
AC087477.5-201ENST00000558246 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
AC087477.5-201ENST00000558246 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
AC087477.5-201ENST00000558246 WASLO00401 505 aaPredicted RBP11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 GNAI1P63096 354 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 STK26Q9P289 416 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
AC087477.5-201ENST00000558246 NRXN3Q9Y4C0 1643 aa11.29□□□□□ -0.6
AC087477.5-201ENST00000558246 U2SURPO15042 1029 aaKnown RBP11.29□□□□□ -0.6
AC087477.5-201ENST00000558246 RIPK4P57078 832 aa11.29□□□□□ -0.6
AC087477.5-201ENST00000558246 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
AC087477.5-201ENST00000558246 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
AC087477.5-201ENST00000558246 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 SMC4Q9NTJ3 1288 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 IFT57Q9NWB7 429 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
AC087477.5-201ENST00000558246 PTGER2P43116 358 aa11.27□□□□□ -0.61
AC087477.5-201ENST00000558246 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
AC087477.5-201ENST00000558246 COG3Q96JB2 828 aa11.27□□□□□ -0.61
AC087477.5-201ENST00000558246 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
AC087477.5-201ENST00000558246 TNRQ92752 1358 aa11.27□□□□□ -0.61
AC087477.5-201ENST00000558246 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 IGHDP01880 384 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 RGS3P49796 1198 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 PIK3R4Q99570 1358 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
AC087477.5-201ENST00000558246 STK25O00506 426 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 KIF3CO14782 793 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 GCC1Q96CN9 775 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 TMEM2Q9UHN6 1383 aa11.25□□□□□ -0.61
AC087477.5-201ENST00000558246 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
AC087477.5-201ENST00000558246 SAFB2Q14151 953 aaKnown RBP eCLIP11.24□□□□□ -0.61
AC087477.5-201ENST00000558246 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
AC087477.5-201ENST00000558246 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
AC087477.5-201ENST00000558246 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 NBR1Q14596 966 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 API5Q9BZZ5 524 aaKnown RBP11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 SOS1Q07889 1333 aaPredicted RBP11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 TTC21BQ7Z4L5 1316 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 TOPAZ1Q8N9V7 1692 aa11.23□□□□□ -0.61
AC087477.5-201ENST00000558246 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 TRIM27P14373 513 aa11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 ZBTB40Q9NUA8 1239 aa11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
AC087477.5-201ENST00000558246 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms