RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 C4orf46Q504U0 113 aa13.09□□□□□ -0.31
LRP6-205ENST00000540527 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
LRP6-205ENST00000540527 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
LRP6-205ENST00000540527 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
LRP6-205ENST00000540527 SH3BP5O60239 455 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 RHBDL3P58872 404 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 DUSP9Q99956 384 aaKnown RBP13.08□□□□□ -0.32
LRP6-205ENST00000540527 MAF1Q9H063 256 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 PRKAB1Q9Y478 270 aa13.08□□□□□ -0.32
LRP6-205ENST00000540527 ZBBXA8MT70 800 aa13.07□□□□□ -0.32
LRP6-205ENST00000540527 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
LRP6-205ENST00000540527 PRSS12P56730 875 aa13.07□□□□□ -0.32
LRP6-205ENST00000540527 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
LRP6-205ENST00000540527 GPATCH11Q8N954 259 aa13.07□□□□□ -0.32
LRP6-205ENST00000540527 EYA1Q99502 592 aa13.07□□□□□ -0.32
LRP6-205ENST00000540527 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
LRP6-205ENST00000540527 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
LRP6-205ENST00000540527 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
LRP6-205ENST00000540527 ZNF594Q96JF6 807 aaPredicted RBP13.06□□□□□ -0.32
LRP6-205ENST00000540527 PRIMPOLQ96LW4 560 aa13.06□□□□□ -0.32
LRP6-205ENST00000540527 TYW1Q9NV66 732 aaKnown RBP13.06□□□□□ -0.32
LRP6-205ENST00000540527 FGRP09769 529 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 PAX3P23760 479 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 PSMD2Q13200 908 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 BIRC2Q13490 618 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 C6orf132Q5T0Z8 1188 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 VPS37DQ86XT2 251 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
LRP6-205ENST00000540527 PRC1O43663 620 aa13.04□□□□□ -0.32
LRP6-205ENST00000540527 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
LRP6-205ENST00000540527 CLDN10P78369 228 aa13.04□□□□□ -0.32
LRP6-205ENST00000540527 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
LRP6-205ENST00000540527 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
LRP6-205ENST00000540527 DNAAF2Q9NVR5 837 aaKnown RBP13.04□□□□□ -0.32
LRP6-205ENST00000540527 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
LRP6-205ENST00000540527 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
LRP6-205ENST00000540527 PPP1R12AO14974 1030 aaPredicted RBP13.03□□□□□ -0.32
LRP6-205ENST00000540527 G3V3G9 751 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 DNAJB2P25686 324 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 TIE1P35590 1138 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 MTMR3Q13615 1198 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 SIX5Q8N196 739 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 PLPP7Q8NBV4 271 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.33
LRP6-205ENST00000540527 DDX41Q9UJV9 622 aaKnown RBP13.02□□□□□ -0.33
LRP6-205ENST00000540527 DKK1O94907 266 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 DSC3Q14574 896 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 EML3Q32P44 896 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
LRP6-205ENST00000540527 JDP2Q8WYK2 163 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 FRMD6Q96NE9 622 aa13.01□□□□□ -0.33
LRP6-205ENST00000540527 TTLL13PA6NNM8 815 aa13□□□□□ -0.33
LRP6-205ENST00000540527 PDGFRBP09619 1106 aa13□□□□□ -0.33
LRP6-205ENST00000540527 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
LRP6-205ENST00000540527 MKL1Q969V6 931 aa13□□□□□ -0.33
LRP6-205ENST00000540527 PHF12Q96QT6 1004 aa13□□□□□ -0.33
LRP6-205ENST00000540527 GCGRP47871 477 aa12.99□□□□□ -0.33
LRP6-205ENST00000540527 AMPD3Q01432 767 aa12.99□□□□□ -0.33
LRP6-205ENST00000540527 KCNH2Q12809 1159 aa12.99□□□□□ -0.33
LRP6-205ENST00000540527 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
LRP6-205ENST00000540527 NDUFB5O43674 189 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 NPR3P17342 541 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 SEC13P55735 322 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 SERINC3Q13530 473 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 CLEC4GQ6UXB4 293 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 RNF19AQ9NV58 838 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
LRP6-205ENST00000540527 SLC34A2O95436 690 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 MAP7D1Q3KQU3 841 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 C8orf48Q96LL4 319 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
LRP6-205ENST00000540527 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
LRP6-205ENST00000540527 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
LRP6-205ENST00000540527 FAM13AO94988 1023 aa12.96□□□□□ -0.33
LRP6-205ENST00000540527 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
LRP6-205ENST00000540527 MAPK8P45983 427 aa12.96□□□□□ -0.33
LRP6-205ENST00000540527 PHTF2Q8N3S3 785 aa12.96□□□□□ -0.33
LRP6-205ENST00000540527 RNPC3Q96LT9 517 aaKnown RBP12.96□□□□□ -0.33
LRP6-205ENST00000540527 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.339e-7■□□□□ 10.7
LRP6-205ENST00000540527 CHIC2Q9UKJ5 165 aa12.96□□□□□ -0.33
LRP6-205ENST00000540527 PER1O15534 1290 aaPredicted RBP12.95□□□□□ -0.34
LRP6-205ENST00000540527 RACK1P63244 317 aaKnown RBP12.95□□□□□ -0.34
LRP6-205ENST00000540527 PLCB3Q01970 1234 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms