RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
LRP6-205ENST00000540527 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
LRP6-205ENST00000540527 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
LRP6-205ENST00000540527 SLC24A1O60721 1099 aa22.19■■□□□ 1.14
LRP6-205ENST00000540527 EHMT2Q96KQ7 1210 aa22.1■■□□□ 1.13
LRP6-205ENST00000540527 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
LRP6-205ENST00000540527 KCNA4P22459 653 aa21.06■□□□□ 0.96
LRP6-205ENST00000540527 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
LRP6-205ENST00000540527 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
LRP6-205ENST00000540527 RTN4Q9NQC3 1192 aaKnown RBP20.71■□□□□ 0.91
LRP6-205ENST00000540527 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
LRP6-205ENST00000540527 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
LRP6-205ENST00000540527 ADRA2BP18089 450 aa20.06■□□□□ 0.8
LRP6-205ENST00000540527 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
LRP6-205ENST00000540527 ZBTB22O15209 634 aa19.44■□□□□ 0.7
LRP6-205ENST00000540527 DAXXQ9UER7 740 aaPredicted RBP19.38■□□□□ 0.69
LRP6-205ENST00000540527 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
LRP6-205ENST00000540527 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
LRP6-205ENST00000540527 PRKCSHP14314 528 aaPredicted RBP19.16■□□□□ 0.66
LRP6-205ENST00000540527 BCANQ96GW7 911 aa19.06■□□□□ 0.64
LRP6-205ENST00000540527 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
LRP6-205ENST00000540527 TAOK2Q9UL54 1235 aa19■□□□□ 0.63
LRP6-205ENST00000540527 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
LRP6-205ENST00000540527 ARXQ96QS3 562 aa18.86■□□□□ 0.61
LRP6-205ENST00000540527 FOXD4L1Q9NU39 408 aa18.82■□□□□ 0.6
LRP6-205ENST00000540527 FKBP8Q14318 412 aa18.79■□□□□ 0.6
LRP6-205ENST00000540527 HAP1P54257 671 aaPredicted RBP18.64■□□□□ 0.57
LRP6-205ENST00000540527 TPRNQ4KMQ1 711 aa18.62■□□□□ 0.57
LRP6-205ENST00000540527 TIMELESSQ9UNS1 1208 aa18.61■□□□□ 0.57
LRP6-205ENST00000540527 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
LRP6-205ENST00000540527 TULP1O00294 542 aaPredicted RBP18.41■□□□□ 0.54
LRP6-205ENST00000540527 FOXD1Q16676 465 aa18.38■□□□□ 0.53
LRP6-205ENST00000540527 ERICH6Q7L0X2 663 aa18.31■□□□□ 0.52
LRP6-205ENST00000540527 HOMEZQ8IX15 550 aa18.28■□□□□ 0.52
LRP6-205ENST00000540527 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
LRP6-205ENST00000540527 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
LRP6-205ENST00000540527 GTF3C3Q9Y5Q9 886 aa18.16■□□□□ 0.5
LRP6-205ENST00000540527 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
LRP6-205ENST00000540527 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
LRP6-205ENST00000540527 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
LRP6-205ENST00000540527 DCAF8L2P0C7V8 631 aa17.87■□□□□ 0.45
LRP6-205ENST00000540527 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
LRP6-205ENST00000540527 TMEM132AQ24JP5 1023 aa17.79■□□□□ 0.44
LRP6-205ENST00000540527 FBLN2P98095 1184 aa17.77■□□□□ 0.44
LRP6-205ENST00000540527 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
LRP6-205ENST00000540527 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.41
LRP6-205ENST00000540527 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
LRP6-205ENST00000540527 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
LRP6-205ENST00000540527 BBXQ8WY36 941 aaPredicted RBP17.57■□□□□ 0.4
LRP6-205ENST00000540527 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
LRP6-205ENST00000540527 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
LRP6-205ENST00000540527 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
LRP6-205ENST00000540527 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
LRP6-205ENST00000540527 NBR1Q14596 966 aa17.47■□□□□ 0.39
LRP6-205ENST00000540527 PKD2Q13563 968 aa17.43■□□□□ 0.38
LRP6-205ENST00000540527 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
LRP6-205ENST00000540527 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
LRP6-205ENST00000540527 VASPP50552 380 aaPredicted RBP17.32■□□□□ 0.36
LRP6-205ENST00000540527 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
LRP6-205ENST00000540527 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
LRP6-205ENST00000540527 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
LRP6-205ENST00000540527 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
LRP6-205ENST00000540527 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
LRP6-205ENST00000540527 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
LRP6-205ENST00000540527 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
LRP6-205ENST00000540527 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
LRP6-205ENST00000540527 APLP2Q06481 763 aa17.06■□□□□ 0.32
LRP6-205ENST00000540527 PROM2Q8N271 834 aa16.97■□□□□ 0.31
LRP6-205ENST00000540527 ECM2O94769 699 aaPredicted RBP16.94■□□□□ 0.3
LRP6-205ENST00000540527 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
LRP6-205ENST00000540527 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
LRP6-205ENST00000540527 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
LRP6-205ENST00000540527 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
LRP6-205ENST00000540527 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
LRP6-205ENST00000540527 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
LRP6-205ENST00000540527 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
LRP6-205ENST00000540527 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
LRP6-205ENST00000540527 HRCP23327 699 aa16.73■□□□□ 0.27
LRP6-205ENST00000540527 RGL2O15211 777 aa16.72■□□□□ 0.27
LRP6-205ENST00000540527 SPOCK2Q92563 424 aa16.68■□□□□ 0.26
LRP6-205ENST00000540527 MYT1Q01538 1121 aa16.66■□□□□ 0.26
LRP6-205ENST00000540527 BRPF1P55201 1214 aaPredicted RBP16.61■□□□□ 0.25
LRP6-205ENST00000540527 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
LRP6-205ENST00000540527 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
LRP6-205ENST00000540527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
LRP6-205ENST00000540527 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
LRP6-205ENST00000540527 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
LRP6-205ENST00000540527 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
LRP6-205ENST00000540527 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
LRP6-205ENST00000540527 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
LRP6-205ENST00000540527 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
LRP6-205ENST00000540527 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
LRP6-205ENST00000540527 ZMYND15Q9H091 742 aa16.33■□□□□ 0.2
LRP6-205ENST00000540527 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
LRP6-205ENST00000540527 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
LRP6-205ENST00000540527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRP6-205ENST00000540527 ZBTB7CA1YPR0 619 aa16.26■□□□□ 0.19
LRP6-205ENST00000540527 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
LRP6-205ENST00000540527 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
LRP6-205ENST00000540527 MSH5O43196 834 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms