RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ST18O60284 1047 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
SNF8-210ENST00000511214 GSPT1P15170 499 aaKnown RBP11.21□□□□□ -0.61
SNF8-210ENST00000511214 SSFA2P28290 1259 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 ZSCAN30Q86W11 494 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 TSPYL6Q8N831 410 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.62
SNF8-210ENST00000511214 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
SNF8-210ENST00000511214 REC8O95072 547 aa11.2□□□□□ -0.62
SNF8-210ENST00000511214 DDX49Q9Y6V7 483 aaKnown RBP11.2□□□□□ -0.62
SNF8-210ENST00000511214 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
SNF8-210ENST00000511214 TECPR2O15040 1411 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 MCM2P49736 904 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 ARXQ96QS3 562 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 OSBPL3Q9H4L5 887 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
SNF8-210ENST00000511214 RGS12O14924 1447 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 WASLO00401 505 aaPredicted RBP11.18□□□□□ -0.62
SNF8-210ENST00000511214 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
SNF8-210ENST00000511214 HMMRO75330 724 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 HMOX1P09601 288 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 MCM5P33992 734 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
SNF8-210ENST00000511214 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.18□□□□□ -0.62
SNF8-210ENST00000511214 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 COG3Q96JB2 828 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 LMBRD1Q9NUN5 540 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
SNF8-210ENST00000511214 C3P01024 1663 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 CHL1O00533 1208 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 OFD1O75665 1012 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNF8-210ENST00000511214 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
SNF8-210ENST00000511214 RBM42Q9BTD8 480 aaKnown RBP11.17□□□□□ -0.62
SNF8-210ENST00000511214 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
SNF8-210ENST00000511214 RTL1A6NKG5 1358 aa11.16□□□□□ -0.62
SNF8-210ENST00000511214 ERC2O15083 957 aa11.16□□□□□ -0.62
SNF8-210ENST00000511214 MBD3O95983 291 aa11.16□□□□□ -0.62
SNF8-210ENST00000511214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNF8-210ENST00000511214 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
SNF8-210ENST00000511214 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
SNF8-210ENST00000511214 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
SNF8-210ENST00000511214 CPS1P31327 1500 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 ZNF500O60304 480 aaPredicted RBP11.15□□□□□ -0.62
SNF8-210ENST00000511214 SDSP20132 328 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.62
SNF8-210ENST00000511214 ANAPC15P60006 121 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 STAG3Q9UJ98 1225 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
SNF8-210ENST00000511214 ITSN1Q15811 1721 aa11.15□□□□□ -0.63
SNF8-210ENST00000511214 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
SNF8-210ENST00000511214 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
SNF8-210ENST00000511214 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
SNF8-210ENST00000511214 NOL7Q9UMY1 257 aaKnown RBP11.14□□□□□ -0.63
SNF8-210ENST00000511214 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
SNF8-210ENST00000511214 RGPD1P0DJD0 1748 aa11.13□□□□□ -0.63
SNF8-210ENST00000511214 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
SNF8-210ENST00000511214 NME9Q86XW9 330 aa11.13□□□□□ -0.63
SNF8-210ENST00000511214 INTS4Q96HW7 963 aaKnown RBP11.13□□□□□ -0.63
SNF8-210ENST00000511214 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
SNF8-210ENST00000511214 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 ELL2O00472 640 aaPredicted RBP11.12□□□□□ -0.63
SNF8-210ENST00000511214 MCCP23508 829 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
SNF8-210ENST00000511214 CUL4AQ13619 759 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 LRSAM1Q6UWE0 723 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 NUDT16Q96DE0 195 aaKnown RBP11.12□□□□□ -0.63
SNF8-210ENST00000511214 PDCL3Q9H2J4 239 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 MSH6P52701 1360 aa11.12□□□□□ -0.63
SNF8-210ENST00000511214 AOX1Q06278 1338 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 OVOS2A0A0J9YW53 1432 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 CRB1P82279 1406 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 OVOS2Q6IE36 1432 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 CAVIN1Q6NZI2 390 aaKnown RBP11.11□□□□□ -0.63
SNF8-210ENST00000511214 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 SRCIN1Q9C0H9 1055 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 NALCNQ8IZF0 1738 aa11.11□□□□□ -0.63
SNF8-210ENST00000511214 FBXO31Q5XUX0 539 aaPredicted RBP11.1□□□□□ -0.63
SNF8-210ENST00000511214 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
SNF8-210ENST00000511214 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
SNF8-210ENST00000511214 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
SNF8-210ENST00000511214 CCDC39Q9UFE4 941 aa11.1□□□□□ -0.63
SNF8-210ENST00000511214 ZDHHC9Q9Y397 364 aa11.1□□□□□ -0.63
SNF8-210ENST00000511214 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
SNF8-210ENST00000511214 SALL3Q9BXA9 1300 aa11.09□□□□□ -0.63
SNF8-210ENST00000511214 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
SNF8-210ENST00000511214 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
SNF8-210ENST00000511214 BRD1O95696 1058 aa11.09□□□□□ -0.63
SNF8-210ENST00000511214 PDE1AP54750 535 aa11.09□□□□□ -0.63
SNF8-210ENST00000511214 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms