RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 OVOS2Q6IE36 1432 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
LRRC47-203ENST00000479239 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 CHADLQ6NUI6 762 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 ZNF467Q7Z7K2 595 aaPredicted RBP8.06□□□□□ -1.12
LRRC47-203ENST00000479239 PNNQ9H307 717 aaKnown RBP8.06□□□□□ -1.12
LRRC47-203ENST00000479239 SUPT16HQ9Y5B9 1047 aaKnown RBP8.06□□□□□ -1.12
LRRC47-203ENST00000479239 ANKRD26Q9UPS8 1709 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 C1orf167Q5SNV9 1468 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 IL13P35225 146 aa8.05□□□□□ -1.12
LRRC47-203ENST00000479239 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
LRRC47-203ENST00000479239 KRT28Q7Z3Y7 464 aa8.05□□□□□ -1.12
LRRC47-203ENST00000479239 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
LRRC47-203ENST00000479239 DDX17Q92841 729 aaKnown RBP8.05□□□□□ -1.12
LRRC47-203ENST00000479239 CDCA7LQ96GN5 454 aa8.05□□□□□ -1.12
LRRC47-203ENST00000479239 COL3A1P02461 1466 aaPredicted RBP8.05□□□□□ -1.12
LRRC47-203ENST00000479239 GLI3P10071 1580 aa8.05□□□□□ -1.12
LRRC47-203ENST00000479239 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
LRRC47-203ENST00000479239 COL22A1Q8NFW1 1626 aaPredicted RBP8.04□□□□□ -1.12
LRRC47-203ENST00000479239 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.04□□□□□ -1.12
LRRC47-203ENST00000479239 MARF1Q9Y4F3 1742 aaKnown RBP8.04□□□□□ -1.12
LRRC47-203ENST00000479239 FCHSD2O94868 740 aa8.04□□□□□ -1.12
LRRC47-203ENST00000479239 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
LRRC47-203ENST00000479239 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
LRRC47-203ENST00000479239 RRP7AQ9Y3A4 280 aaKnown RBP8.04□□□□□ -1.12
LRRC47-203ENST00000479239 NRKQ7Z2Y5 1582 aa8.04□□□□□ -1.12
LRRC47-203ENST00000479239 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 NEFMP07197 916 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 AMPHP49418 695 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 PDAP1Q13442 181 aaKnown RBP8.03□□□□□ -1.12
LRRC47-203ENST00000479239 HSP90AB2PQ58FF8 381 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 PLEKHF1Q96S99 279 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 ZNF521Q96K83 1311 aa8.03□□□□□ -1.12
LRRC47-203ENST00000479239 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.13
LRRC47-203ENST00000479239 SBNO1A3KN83 1393 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 HMOX1P09601 288 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 EIF4A2Q14240 407 aaKnown RBP8.02□□□□□ -1.13
LRRC47-203ENST00000479239 WWC1Q8IX03 1113 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 KCNH5Q8NCM2 988 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 WDR70Q9NW82 654 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 PCDHB8Q9UN66 801 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 PCDHB13Q9Y5F0 798 aa8.02□□□□□ -1.13
LRRC47-203ENST00000479239 FLT4P35916 1363 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 E9PSI1 815 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 PRKAR2BP31323 418 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
LRRC47-203ENST00000479239 SLFN5Q08AF3 891 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 CCDC27Q2M243 656 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
LRRC47-203ENST00000479239 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
LRRC47-203ENST00000479239 NPHP3Q7Z494 1330 aa8.01□□□□□ -1.13
LRRC47-203ENST00000479239 SULT6B1Q6IMI4 303 aa8□□□□□ -1.13
LRRC47-203ENST00000479239 WDR63Q8IWG1 891 aa8□□□□□ -1.13
LRRC47-203ENST00000479239 TRMT2AQ8IZ69 625 aaKnown RBP8□□□□□ -1.13
LRRC47-203ENST00000479239 RCAN3Q9UKA8 241 aa8□□□□□ -1.13
LRRC47-203ENST00000479239 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 PIK3C2AO00443 1686 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 ZBTB7CA1YPR0 619 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 GCP02774 474 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 HOXC9P31274 260 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 RIPK4P57078 832 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 SF3B2Q13435 895 aaKnown RBP7.99□□□□□ -1.13
LRRC47-203ENST00000479239 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 DUSP27Q5VZP5 1158 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
LRRC47-203ENST00000479239 SOS2Q07890 1332 aaPredicted RBP7.99□□□□□ -1.13
LRRC47-203ENST00000479239 KIF1AQ12756 1690 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 PSEN1P49768 467 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 IRX6P78412 446 aaPredicted RBP7.98□□□□□ -1.13
LRRC47-203ENST00000479239 AEBP1Q8IUX7 1158 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 IP6K1Q92551 441 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 LTV1Q96GA3 475 aaPredicted RBP7.98□□□□□ -1.13
LRRC47-203ENST00000479239 MFRPQ9BY79 579 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 TRIM35Q9UPQ4 493 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 USP19O94966 1318 aa7.98□□□□□ -1.13
LRRC47-203ENST00000479239 RTL1A6NKG5 1358 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
LRRC47-203ENST00000479239 R3HDM1Q15032 1099 aaKnown RBP7.97□□□□□ -1.13
LRRC47-203ENST00000479239 ARHGEF25Q86VW2 580 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 EYA1Q99502 592 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 MYH16Q9H6N6 1097 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 SLIT2O94813 1529 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 RNF123Q5XPI4 1314 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 ARHGEF10O15013 1369 aa7.97□□□□□ -1.13
LRRC47-203ENST00000479239 CAMTA1Q9Y6Y1 1673 aa7.96□□□□□ -1.13
LRRC47-203ENST00000479239 CALD1Q05682 793 aaKnown RBP7.96□□□□□ -1.14
LRRC47-203ENST00000479239 LMOD3Q0VAK6 560 aa7.96□□□□□ -1.14
LRRC47-203ENST00000479239 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.14
LRRC47-203ENST00000479239 ZNF579Q8NAF0 562 aaKnown RBP7.96□□□□□ -1.14
LRRC47-203ENST00000479239 ZNF784Q8NCA9 323 aaPredicted RBP7.96□□□□□ -1.14
LRRC47-203ENST00000479239 IL16Q14005 1332 aa7.96□□□□□ -1.14
LRRC47-203ENST00000479239 SPATA31A3Q5VYP0 1347 aa7.96□□□□□ -1.14
LRRC47-203ENST00000479239 IGSF1Q8N6C5 1336 aa7.96□□□□□ -1.14
LRRC47-203ENST00000479239 TNS3Q68CZ2 1445 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 RGPD1P0DJD0 1748 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 PEAK1Q9H792 1746 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 TNS1Q9HBL0 1735 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms