RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CCT4P50991 539 aaKnown RBP14.17□□□□□ -0.14
UBR4-205ENST00000417040 CFTRP13569 1480 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 RRS1Q15050 365 aaKnown RBP14.17□□□□□ -0.14
UBR4-205ENST00000417040 JMYQ8N9B5 988 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 PDCL3Q9H2J4 239 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 TICAM2Q86XR7 235 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 PTPRGP23470 1445 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
UBR4-205ENST00000417040 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
UBR4-205ENST00000417040 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
UBR4-205ENST00000417040 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 DNA2P51530 1060 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 TMEM132AQ24JP5 1023 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 ABTB2Q8N961 1025 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
UBR4-205ENST00000417040 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
UBR4-205ENST00000417040 ADCY5O95622 1261 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
UBR4-205ENST00000417040 CABP1Q9NZU7 370 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 GIMAP7Q8NHV1 300 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 CPLX3Q8WVH0 158 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 ARHGAP29Q52LW3 1261 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 KLHL10Q6JEL2 608 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
UBR4-205ENST00000417040 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
UBR4-205ENST00000417040 SMTNL1A8MU46 457 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 UBE2Q2Q8WVN8 375 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 CDK19Q9BWU1 502 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 IGF1RP08069 1367 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBR4-205ENST00000417040 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
UBR4-205ENST00000417040 ISM2Q6H9L7 571 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 PANK2Q9BZ23 570 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 STIM1Q13586 685 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 KIF6Q6ZMV9 814 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 TRIM22Q8IYM9 498 aa14.14□□□□□ -0.15
UBR4-205ENST00000417040 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
UBR4-205ENST00000417040 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
UBR4-205ENST00000417040 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
UBR4-205ENST00000417040 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
UBR4-205ENST00000417040 ZSCAN31Q96LW9 406 aaPredicted RBP14.13□□□□□ -0.15
UBR4-205ENST00000417040 CCDC113Q9H0I3 377 aa14.13□□□□□ -0.15
UBR4-205ENST00000417040 BCCIPQ9P287 314 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBR4-205ENST00000417040 CCDC148Q8NFR7 591 aa14.13□□□□□ -0.15
UBR4-205ENST00000417040 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
UBR4-205ENST00000417040 IGHDP01880 384 aa14.13□□□□□ -0.15
UBR4-205ENST00000417040 RNF187Q5TA31 235 aaPredicted RBP14.12□□□□□ -0.15
UBR4-205ENST00000417040 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
UBR4-205ENST00000417040 KIF18AQ8NI77 898 aa14.12□□□□□ -0.15
UBR4-205ENST00000417040 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
UBR4-205ENST00000417040 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.151e-10■■■■□ 21
UBR4-205ENST00000417040 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
UBR4-205ENST00000417040 SFPQP23246 707 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBR4-205ENST00000417040 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
UBR4-205ENST00000417040 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
UBR4-205ENST00000417040 CRACR2AQ9BSW2 395 aa14.11□□□□□ -0.15
UBR4-205ENST00000417040 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
UBR4-205ENST00000417040 BIN1O00499 593 aa14.11□□□□□ -0.15
UBR4-205ENST00000417040 SHTN1A0MZ66 631 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 DHX8Q14562 1220 aaKnown RBP14.1□□□□□ -0.15
UBR4-205ENST00000417040 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 TFIP11Q9UBB9 837 aaKnown RBP14.1□□□□□ -0.15
UBR4-205ENST00000417040 SLC3A2P08195 630 aaKnown RBP14.1□□□□□ -0.15
UBR4-205ENST00000417040 KIF4BQ2VIQ3 1234 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 ZSWIM4Q9H7M6 989 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 MCM10Q7L590 875 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
UBR4-205ENST00000417040 IQCEQ6IPM2 695 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
UBR4-205ENST00000417040 TMPOP42166 694 aaKnown RBP14.09□□□□□ -0.15
UBR4-205ENST00000417040 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
UBR4-205ENST00000417040 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
UBR4-205ENST00000417040 MX1P20591 662 aa14.09□□□□□ -0.15
UBR4-205ENST00000417040 USP8P40818 1118 aa14.09□□□□□ -0.15
UBR4-205ENST00000417040 PLEKHO1Q53GL0 409 aaPredicted RBP14.09□□□□□ -0.15
UBR4-205ENST00000417040 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
UBR4-205ENST00000417040 ESCO1Q5FWF5 840 aa14.09□□□□□ -0.15
UBR4-205ENST00000417040 SSH1Q8WYL5 1049 aa14.09□□□□□ -0.15
UBR4-205ENST00000417040 BOLA2Q9H3K6 86 aa14.08□□□□□ -0.15
UBR4-205ENST00000417040 NOL7Q9UMY1 257 aaKnown RBP14.08□□□□□ -0.15
UBR4-205ENST00000417040 ZRSR2Q15696 482 aaKnown RBP14.08□□□□□ -0.16
UBR4-205ENST00000417040 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 LMAN1P49257 510 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 F6X3S4 739 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 KIF5CO60282 957 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
UBR4-205ENST00000417040 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.16
UBR4-205ENST00000417040 TDO2P48775 406 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 CCT2P78371 535 aaKnown RBP14.08□□□□□ -0.16
UBR4-205ENST00000417040 CCDC82Q8N4S0 544 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
UBR4-205ENST00000417040 GOLGA6L10A0A0M3HER8 536 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms