RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KCNJ4P48050 445 aa16.48■□□□□ 0.23
COL6A2-204ENST00000409416 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
COL6A2-204ENST00000409416 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
COL6A2-204ENST00000409416 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
COL6A2-204ENST00000409416 IL13P35225 146 aa16.48■□□□□ 0.23
COL6A2-204ENST00000409416 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 CABLES1Q8TDN4 633 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 MYL6BP14649 208 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 SSFA2P28290 1259 aa16.47■□□□□ 0.23
COL6A2-204ENST00000409416 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
COL6A2-204ENST00000409416 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
COL6A2-204ENST00000409416 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
COL6A2-204ENST00000409416 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
COL6A2-204ENST00000409416 MAP3K19Q56UN5 1328 aa16.46■□□□□ 0.23
COL6A2-204ENST00000409416 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
COL6A2-204ENST00000409416 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.22
COL6A2-204ENST00000409416 CDC45O75419 566 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 FOSBP53539 338 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
COL6A2-204ENST00000409416 CFAP44Q96MT7 982 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 EYA1Q99502 592 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
COL6A2-204ENST00000409416 ARHGEF28Q8N1W1 1705 aaKnown RBP16.44■□□□□ 0.22
COL6A2-204ENST00000409416 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
COL6A2-204ENST00000409416 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
COL6A2-204ENST00000409416 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
COL6A2-204ENST00000409416 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
COL6A2-204ENST00000409416 VIRMAQ69YN4 1812 aaKnown RBP16.43■□□□□ 0.22
COL6A2-204ENST00000409416 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
COL6A2-204ENST00000409416 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
COL6A2-204ENST00000409416 MRE11P49959 708 aa16.43■□□□□ 0.22
COL6A2-204ENST00000409416 NEK4P51957 841 aa16.42■□□□□ 0.22
COL6A2-204ENST00000409416 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
COL6A2-204ENST00000409416 SIGLEC1Q9BZZ2 1709 aa16.42■□□□□ 0.22
COL6A2-204ENST00000409416 KCNQ3O43525 872 aa16.42■□□□□ 0.22
COL6A2-204ENST00000409416 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
COL6A2-204ENST00000409416 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
COL6A2-204ENST00000409416 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
COL6A2-204ENST00000409416 PTPRMP28827 1452 aa16.41■□□□□ 0.22
COL6A2-204ENST00000409416 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-204ENST00000409416 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-204ENST00000409416 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-204ENST00000409416 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
COL6A2-204ENST00000409416 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
COL6A2-204ENST00000409416 GDPD2Q9HCC8 539 aa16.4■□□□□ 0.22
COL6A2-204ENST00000409416 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-204ENST00000409416 CD163L1Q9NR16 1453 aa16.4■□□□□ 0.22
COL6A2-204ENST00000409416 KDM4AO75164 1064 aa16.4■□□□□ 0.22
COL6A2-204ENST00000409416 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
COL6A2-204ENST00000409416 LGR6Q9HBX8 967 aa16.4■□□□□ 0.22
COL6A2-204ENST00000409416 PIK3C2BO00750 1634 aa16.39■□□□□ 0.22
COL6A2-204ENST00000409416 ANP32BQ92688 251 aaKnown RBP16.39■□□□□ 0.22
COL6A2-204ENST00000409416 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
COL6A2-204ENST00000409416 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-204ENST00000409416 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-204ENST00000409416 PLEKHM2Q8IWE5 1019 aa16.39■□□□□ 0.21
COL6A2-204ENST00000409416 HMMRO75330 724 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-204ENST00000409416 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 SNX21Q969T3 373 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 KIF2CQ99661 725 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 TNRQ92752 1358 aa16.38■□□□□ 0.21
COL6A2-204ENST00000409416 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-204ENST00000409416 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
COL6A2-204ENST00000409416 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
COL6A2-204ENST00000409416 SDSP20132 328 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 FLIIQ13045 1269 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
COL6A2-204ENST00000409416 CAVIN1Q6NZI2 390 aaKnown RBP16.36■□□□□ 0.21
COL6A2-204ENST00000409416 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-204ENST00000409416 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 FSD2A1L4K1 749 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 ZGPATQ8N5A5 531 aaKnown RBP16.36■□□□□ 0.21
COL6A2-204ENST00000409416 TCEANC2Q96MN5 208 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 ABCC4O15439 1325 aa16.36■□□□□ 0.21
COL6A2-204ENST00000409416 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
COL6A2-204ENST00000409416 CPA1P15085 419 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 PKP1Q13835 747 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 TTC22Q5TAA0 569 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
COL6A2-204ENST00000409416 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
COL6A2-204ENST00000409416 MSH6P52701 1360 aa16.34■□□□□ 0.21
COL6A2-204ENST00000409416 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms