RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.44
KDM4A-201ENST00000372396 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
KDM4A-201ENST00000372396 ALKQ9UM73 1620 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 FBLN1P23142 703 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 GRPEL1Q9HAV7 217 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
KDM4A-201ENST00000372396 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.45
KDM4A-201ENST00000372396 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
KDM4A-201ENST00000372396 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 MCM10Q7L590 875 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 HOMEZQ8IX15 550 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 PANK2Q9BZ23 570 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 HDGFL1Q5TGJ6 251 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
KDM4A-201ENST00000372396 NEXMIFQ5QGS0 1516 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 CLTCQ00610 1675 aaKnown RBP12.26□□□□□ -0.45
KDM4A-201ENST00000372396 KCNJ4P48050 445 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
KDM4A-201ENST00000372396 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
KDM4A-201ENST00000372396 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 DMTNQ08495 405 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 PRDM11Q9NQV5 511 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
KDM4A-201ENST00000372396 MSH6P52701 1360 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
KDM4A-201ENST00000372396 RNF123Q5XPI4 1314 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 ZC3H6P61129 1189 aaKnown RBP12.24□□□□□ -0.45
KDM4A-201ENST00000372396 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 UBTFL1P0CB47 393 aaPredicted RBP12.24□□□□□ -0.45
KDM4A-201ENST00000372396 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
KDM4A-201ENST00000372396 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
KDM4A-201ENST00000372396 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
KDM4A-201ENST00000372396 MROH1Q8NDA8 1641 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 IL13P35225 146 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 TEX2Q8IWB9 1127 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 ZSCAN30Q86W11 494 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 SBNO1A3KN83 1393 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 PATL2C9JE40 543 aaKnown RBP12.23□□□□□ -0.45
KDM4A-201ENST00000372396 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
KDM4A-201ENST00000372396 AATKQ6ZMQ8 1374 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 ROBO2Q9HCK4 1378 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 PIK3C2BO00750 1634 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 TRAK2O60296 914 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 GNAI2P04899 355 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
KDM4A-201ENST00000372396 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 TRIM27P14373 513 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 CBX1P83916 185 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 CHMP3Q9Y3E7 222 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
KDM4A-201ENST00000372396 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
KDM4A-201ENST00000372396 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.46
KDM4A-201ENST00000372396 DLC1Q96QB1 1528 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 PTPRCP08575 1304 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 NPHP1O15259 732 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 RPAP2Q8IXW5 612 aaPredicted RBP12.2□□□□□ -0.46
KDM4A-201ENST00000372396 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
KDM4A-201ENST00000372396 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
KDM4A-201ENST00000372396 OFD1O75665 1012 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
KDM4A-201ENST00000372396 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 TERF1P54274 439 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 CABP4P57796 275 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 REC8O95072 547 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
KDM4A-201ENST00000372396 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 REREQ9P2R6 1566 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 HOXC9P31274 260 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
KDM4A-201ENST00000372396 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
KDM4A-201ENST00000372396 IP6K1Q92551 441 aa12.18□□□□□ -0.46
KDM4A-201ENST00000372396 CDC45O75419 566 aa12.17□□□□□ -0.46
KDM4A-201ENST00000372396 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.46
KDM4A-201ENST00000372396 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
KDM4A-201ENST00000372396 BCCIPQ9P287 314 aaKnown RBP eCLIP12.17□□□□□ -0.46
KDM4A-201ENST00000372396 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
KDM4A-201ENST00000372396 ZNF830Q96NB3 372 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms