RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■■■■■ 90.5
KDM4A-201ENST00000372396 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.729e-11■■■■■ 77.1
KDM4A-201ENST00000372396 SF3B1O75533 1304 aaKnown RBP eCLIP10.21□□□□□ -0.778e-6■■■■■ 57.1
KDM4A-201ENST00000372396 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.27□□□□□ -0.772e-6■■■■■ 54.9
KDM4A-201ENST00000372396 EFTUD2Q15029 972 aaKnown RBP eCLIP10.08□□□□□ -0.81e-7■■■■■ 52.3
KDM4A-201ENST00000372396 PCBP2Q15366 365 aaKnown RBP eCLIP9.67□□□□□ -0.869e-13■■■■■ 44.3
KDM4A-201ENST00000372396 TARDBPQ13148 414 aaKnown RBP eCLIP9.77□□□□□ -0.859e-23■■■■■ 40.8
KDM4A-201ENST00000372396 QKIQ96PU8 341 aaKnown RBP eCLIP10.14□□□□□ -0.792e-7■■■■■ 39.1
KDM4A-201ENST00000372396 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.173e-7■■■■■ 38.7
KDM4A-201ENST00000372396 SF3B4Q15427 424 aaKnown RBP eCLIP10.09□□□□□ -0.792e-7■■■■■ 37.1
KDM4A-201ENST00000372396 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.733e-7■■■■■ 35.6
KDM4A-201ENST00000372396 ZC3H11AO75152 810 aaKnown RBP eCLIP10.6□□□□□ -0.717e-6■■■■■ 33.7
KDM4A-201ENST00000372396 EIF3HO15372 352 aaKnown RBP eCLIP10.92□□□□□ -0.663e-7■■■■■ 31.8
KDM4A-201ENST00000372396 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.232e-8■■■■■ 29.6
KDM4A-201ENST00000372396 RBFOX2O43251 390 aaKnown RBP eCLIP8.59□□□□□ -1.033e-8■■■■■ 28.7
KDM4A-201ENST00000372396 FXR1P51114 621 aaKnown RBP eCLIP10.73□□□□□ -0.695e-10■■■■■ 27.7
KDM4A-201ENST00000372396 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.74□□□□□ -0.692e-6■■■■□ 26
KDM4A-201ENST00000372396 GTF2F1P35269 517 aaKnown RBP eCLIP11.78□□□□□ -0.523e-11■■■■□ 24.9
KDM4A-201ENST00000372396 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.86e-7■■■■□ 23.2
KDM4A-201ENST00000372396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.75□□□□□ -1.171e-9■■■■□ 23.2
KDM4A-201ENST00000372396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.26□□□□□ -0.617e-7■■■■□ 23
KDM4A-201ENST00000372396 RBM15Q96T37 977 aaKnown RBP eCLIP10.36□□□□□ -0.759e-7■■■■□ 22.9
KDM4A-201ENST00000372396 PABPC4Q13310 644 aaKnown RBP eCLIP10.99□□□□□ -0.651e-9■■■■□ 22.8
KDM4A-201ENST00000372396 DDX3XO00571 662 aaKnown RBP eCLIP10.49□□□□□ -0.733e-9■■■■□ 21.9
KDM4A-201ENST00000372396 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.212e-7■■■■□ 19.9
KDM4A-201ENST00000372396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.56e-7■■■□□ 18.5
KDM4A-201ENST00000372396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.38□□□□□ -0.757e-7■■■□□ 17.8
KDM4A-201ENST00000372396 DDX6P26196 483 aaKnown RBP eCLIP9.94□□□□□ -0.821e-7■■■□□ 16.8
KDM4A-201ENST00000372396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■□□ 15.9
KDM4A-201ENST00000372396 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.512e-7■■■□□ 15.7
KDM4A-201ENST00000372396 PTBP1P26599 531 aaKnown RBP eCLIP9.23□□□□□ -0.933e-8■■■□□ 15.6
KDM4A-201ENST00000372396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.365e-6■■■□□ 14.7
KDM4A-201ENST00000372396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■□□□ 14.5
KDM4A-201ENST00000372396 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■□□□ 14.1
KDM4A-201ENST00000372396 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.499e-7■■□□□ 12.7
KDM4A-201ENST00000372396 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■□□□ 12.6
KDM4A-201ENST00000372396 ILF3Q12906 894 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■□□□ 12.4
KDM4A-201ENST00000372396 PPIGQ13427 754 aaKnown RBP eCLIP10.04□□□□□ -0.81e-6■■□□□ 12.1
Retrieved 38 of 38 RNA–protein pairs in 19.9 ms