RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
CD46-206ENST00000360212 CCDC183Q5T5S1 534 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 CCDC141Q6ZP82 1450 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 CCDC112Q8NEF3 446 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 SOX12O15370 315 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 CKAP2LQ8IYA6 745 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 KIF18AQ8NI77 898 aa10.36□□□□□ -0.75
CD46-206ENST00000360212 TRMT1Q9NXH9 659 aaKnown RBP10.36□□□□□ -0.75
CD46-206ENST00000360212 DDX41Q9UJV9 622 aaKnown RBP10.36□□□□□ -0.75
CD46-206ENST00000360212 REC8O95072 547 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 DISP1Q96F81 1524 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 ERC2O15083 957 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 CTIFO43310 598 aaKnown RBP10.35□□□□□ -0.75
CD46-206ENST00000360212 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
CD46-206ENST00000360212 KMT5BQ4FZB7 885 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 FAM184AQ8NB25 1140 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
CD46-206ENST00000360212 CABP2Q9NPB3 220 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 CD109Q6YHK3 1445 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 CLGNO14967 610 aa10.35□□□□□ -0.75
CD46-206ENST00000360212 POLR3GO15318 223 aaPredicted RBP10.34□□□□□ -0.75
CD46-206ENST00000360212 MX1P20591 662 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 ELF2Q15723 593 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 KRT222Q8N1A0 295 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 ZNF215Q9UL58 517 aaPredicted RBP10.34□□□□□ -0.75
CD46-206ENST00000360212 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
CD46-206ENST00000360212 CPA1P15085 419 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
CD46-206ENST00000360212 ARID5BQ14865 1188 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 IQSEC2Q5JU85 1478 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 RAPGEF6Q8TEU7 1601 aa10.34□□□□□ -0.75
CD46-206ENST00000360212 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
CD46-206ENST00000360212 MLECQ14165 292 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 ERVK-7P63135 1459 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 PSEN1P49768 467 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 MMP14P50281 582 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 DCTN1Q14203 1278 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 UVSSAQ2YD98 709 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 NOS1P29475 1434 aa10.33□□□□□ -0.76
CD46-206ENST00000360212 USP27XA6NNY8 438 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 CT47B1P0C2W7 299 aaPredicted RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 HNRNPH2P55795 449 aaKnown RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 NEK11Q8NG66 645 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 CHMP7Q8WUX9 453 aaPredicted RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 PRR29P0C7W0 189 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 PRKAR2BP31323 418 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 DNM1Q05193 864 aaKnown RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 FBXO38Q6PIJ6 1188 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 LOC102724159A0A0B4J2E5 919 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 GOLGA6L6A8MZA4 724 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 VAMP4O75379 141 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 PWP2Q15269 919 aaKnown RBP10.32□□□□□ -0.76
CD46-206ENST00000360212 EXOC6BQ9Y2D4 811 aa10.32□□□□□ -0.76
CD46-206ENST00000360212 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 VPS37CA5D8V6 355 aaPredicted RBP10.31□□□□□ -0.76
CD46-206ENST00000360212 FAM193AP78312 1265 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 SLC4A10Q6U841 1118 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 NUP160Q12769 1436 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 FAM83GA6ND36 823 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 GORABQ5T7V8 394 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 DCTPP1Q9H773 170 aa10.31□□□□□ -0.76
CD46-206ENST00000360212 A0A087WWV3 80 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 CEP135Q66GS9 1140 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
CD46-206ENST00000360212 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
CD46-206ENST00000360212 MYO5CQ9NQX4 1742 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 WDR33Q9C0J8 1336 aaKnown RBP10.3□□□□□ -0.76
CD46-206ENST00000360212 ANKRD36BQ8N2N9 1353 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 ABCC11Q96J66 1382 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 RBM6P78332 1123 aaKnown RBP10.3□□□□□ -0.76
CD46-206ENST00000360212 TWISTNBQ3B726 338 aaPredicted RBP10.3□□□□□ -0.76
CD46-206ENST00000360212 STK26Q9P289 416 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 ARHGAP31Q2M1Z3 1444 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 KANK1Q14678 1352 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 EP400NLQ6ZTU2 488 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 FILIP1Q7Z7B0 1213 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 MEIS3Q99687 375 aa10.3□□□□□ -0.76
CD46-206ENST00000360212 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
CD46-206ENST00000360212 GYS2P54840 703 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 CACTINQ8WUQ7 758 aaKnown RBP10.29□□□□□ -0.76
CD46-206ENST00000360212 JPH4Q96JJ6 628 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 NOL10Q9BSC4 688 aaKnown RBP10.29□□□□□ -0.76
CD46-206ENST00000360212 CALCOCO1Q9P1Z2 691 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 ZNF518AQ6AHZ1 1483 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 TULP2O00295 520 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 SYT1P21579 422 aa10.29□□□□□ -0.76
CD46-206ENST00000360212 UBE2HP62256 183 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms