RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 KIF2CQ99661 725 aa21.85■■□□□ 1.09
CTSB-202ENST00000353047 ISY1Q9ULR0 285 aaKnown RBP21.85■■□□□ 1.09
CTSB-202ENST00000353047 HCLS1P14317 486 aaPredicted RBP21.84■■□□□ 1.09
CTSB-202ENST00000353047 CEP85Q6P2H3 762 aa21.84■■□□□ 1.09
CTSB-202ENST00000353047 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
CTSB-202ENST00000353047 CHAF1AQ13111 956 aaPredicted RBP21.84■■□□□ 1.09
CTSB-202ENST00000353047 ZHX1Q9UKY1 873 aaPredicted RBP21.84■■□□□ 1.09
CTSB-202ENST00000353047 RPAP2Q8IXW5 612 aaPredicted RBP21.83■■□□□ 1.09
CTSB-202ENST00000353047 LMBRD1Q9NUN5 540 aa21.83■■□□□ 1.09
CTSB-202ENST00000353047 DCTPP1Q9H773 170 aa21.83■■□□□ 1.09
CTSB-202ENST00000353047 ARHGEF5Q12774 1597 aa21.83■■□□□ 1.08
CTSB-202ENST00000353047 CCDC39Q9UFE4 941 aa21.83■■□□□ 1.08
CTSB-202ENST00000353047 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
CTSB-202ENST00000353047 IGSF3O75054 1194 aa21.82■■□□□ 1.08
CTSB-202ENST00000353047 MX1P20591 662 aa21.82■■□□□ 1.08
CTSB-202ENST00000353047 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
CTSB-202ENST00000353047 PDE1AP54750 535 aa21.82■■□□□ 1.08
CTSB-202ENST00000353047 NPHP1O15259 732 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 GADD45BO75293 160 aaPredicted RBP21.81■■□□□ 1.08
CTSB-202ENST00000353047 CWC22Q9HCG8 908 aaKnown RBP21.81■■□□□ 1.08
CTSB-202ENST00000353047 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 NLRP6P59044 892 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 GPT2Q8TD30 523 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 SIL1Q9H173 461 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 CCDC83Q8IWF9 413 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 ANKRD44Q8N8A2 993 aa21.81■■□□□ 1.08
CTSB-202ENST00000353047 CROCC2H7BZ55 1655 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 IL16Q14005 1332 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 SRGAP3O43295 1099 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 HSP90B1P14625 803 aaKnown RBP21.8■■□□□ 1.08
CTSB-202ENST00000353047 CBX1P83916 185 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 GIMAP6Q6P9H5 292 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
CTSB-202ENST00000353047 CNPY2Q9Y2B0 182 aa21.79■■□□□ 1.08
CTSB-202ENST00000353047 MBD3O95983 291 aa21.79■■□□□ 1.08
CTSB-202ENST00000353047 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
CTSB-202ENST00000353047 PHF14O94880 888 aa21.79■■□□□ 1.08
CTSB-202ENST00000353047 SLC52A1Q9NWF4 448 aa21.79■■□□□ 1.08
CTSB-202ENST00000353047 C9orf78Q9NZ63 289 aaPredicted RBP21.79■■□□□ 1.08
CTSB-202ENST00000353047 KDM4AO75164 1064 aa21.78■■□□□ 1.08
CTSB-202ENST00000353047 A0A0U1RQG5 324 aaPredicted RBP21.78■■□□□ 1.08
CTSB-202ENST00000353047 HDGFL1Q5TGJ6 251 aa21.78■■□□□ 1.08
CTSB-202ENST00000353047 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
CTSB-202ENST00000353047 MSH6P52701 1360 aa21.77■■□□□ 1.08
CTSB-202ENST00000353047 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
CTSB-202ENST00000353047 USP48Q86UV5 1035 aa21.77■■□□□ 1.07
CTSB-202ENST00000353047 SPDYE4A6NLX3 237 aa21.76■■□□□ 1.07
CTSB-202ENST00000353047 CASTP20810 708 aaKnown RBP21.76■■□□□ 1.07
CTSB-202ENST00000353047 EIF4A2Q14240 407 aaKnown RBP21.76■■□□□ 1.07
CTSB-202ENST00000353047 NECAB1Q8N987 351 aa21.76■■□□□ 1.07
CTSB-202ENST00000353047 FAM173BQ6P4H8 233 aa21.76■■□□□ 1.07
CTSB-202ENST00000353047 CKAP2LQ8IYA6 745 aa21.76■■□□□ 1.07
CTSB-202ENST00000353047 FAM69CQ0P6D2 419 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 LRSAM1Q6UWE0 723 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 A0A0G2JS52 829 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 PNMA6EA0A0J9YXQ4 647 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 BICD2Q8TD16 824 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 PDCL3Q9H2J4 239 aa21.75■■□□□ 1.07
CTSB-202ENST00000353047 TFIP11Q9UBB9 837 aaKnown RBP21.75■■□□□ 1.07
CTSB-202ENST00000353047 JAKMIP1Q96N16 626 aaKnown RBP21.74■■□□□ 1.07
CTSB-202ENST00000353047 E9PCH4 1651 aa21.74■■□□□ 1.07
CTSB-202ENST00000353047 CDC42BPBQ9Y5S2 1711 aa21.74■■□□□ 1.07
CTSB-202ENST00000353047 OFD1O75665 1012 aa21.74■■□□□ 1.07
CTSB-202ENST00000353047 WASLO00401 505 aaPredicted RBP21.74■■□□□ 1.07
CTSB-202ENST00000353047 CSPP1Q1MSJ5 1256 aa21.74■■□□□ 1.07
CTSB-202ENST00000353047 IFIT2P09913 472 aaKnown RBP21.73■■□□□ 1.07
CTSB-202ENST00000353047 IL13P35225 146 aa21.73■■□□□ 1.07
CTSB-202ENST00000353047 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
CTSB-202ENST00000353047 ADCY5O95622 1261 aa21.73■■□□□ 1.07
CTSB-202ENST00000353047 FLIIQ13045 1269 aa21.73■■□□□ 1.07
CTSB-202ENST00000353047 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
CTSB-202ENST00000353047 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 NPATQ14207 1427 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 CLTCL1P53675 1640 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 GNAI3P08754 354 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 UNC5CLQ8IV45 518 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 ZKSCAN5Q9Y2L8 839 aa21.72■■□□□ 1.07
CTSB-202ENST00000353047 ZRSR1Q15695 479 aaKnown RBP21.71■■□□□ 1.07
CTSB-202ENST00000353047 ESYT1Q9BSJ8 1104 aa21.71■■□□□ 1.07
CTSB-202ENST00000353047 NSD2O96028 1365 aa21.71■■□□□ 1.07
CTSB-202ENST00000353047 TEFQ10587 303 aa21.71■■□□□ 1.07
CTSB-202ENST00000353047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.71■■□□□ 1.072e-8■■■□□ 14.9
CTSB-202ENST00000353047 CCT4P50991 539 aaKnown RBP21.7■■□□□ 1.06
CTSB-202ENST00000353047 CCDC30Q5VVM6 783 aa21.7■■□□□ 1.06
CTSB-202ENST00000353047 WDR33Q9C0J8 1336 aaKnown RBP21.69■■□□□ 1.06
CTSB-202ENST00000353047 MTHFSDQ2M296 383 aaKnown RBP21.69■■□□□ 1.06
CTSB-202ENST00000353047 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
CTSB-202ENST00000353047 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
CTSB-202ENST00000353047 DDX11Q96FC9 970 aa21.68■■□□□ 1.06
CTSB-202ENST00000353047 TRIM5Q9C035 493 aa21.68■■□□□ 1.06
CTSB-202ENST00000353047 PPP1R42Q7Z4L9 355 aa21.68■■□□□ 1.06
CTSB-202ENST00000353047 PHAXQ9H814 394 aaKnown RBP21.68■■□□□ 1.06
CTSB-202ENST00000353047 MADDQ8WXG6 1647 aa21.67■■□□□ 1.06
CTSB-202ENST00000353047 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
CTSB-202ENST00000353047 H3BQV1 296 aa21.67■■□□□ 1.06
CTSB-202ENST00000353047 ZKSCAN1P17029 563 aaPredicted RBP21.67■■□□□ 1.06
CTSB-202ENST00000353047 IFFO2Q5TF58 517 aa21.67■■□□□ 1.06
CTSB-202ENST00000353047 DNM1Q05193 864 aaKnown RBP21.66■■□□□ 1.06
CTSB-202ENST00000353047 FMNL2Q96PY5 1086 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms