RNA–Protein interactions for RNA: ENST00000351439.9

PDE1A-201, Transcript of phosphodiesterase 1A, humanhuman

TSL 1 (best) BASIC

Gene PDE1A, Length 2,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-201ENST00000351439 SIRT2Q8IXJ6 389 aa9.73□□□□□ -0.85
PDE1A-201ENST00000351439 TNPO1Q92973 898 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 SNX21Q969T3 373 aa9.73□□□□□ -0.85
PDE1A-201ENST00000351439 PRIMPOLQ96LW4 560 aa9.73□□□□□ -0.85
PDE1A-201ENST00000351439 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 HMGN5P82970 282 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 DNTTIP2Q5QJE6 756 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
PDE1A-201ENST00000351439 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
PDE1A-201ENST00000351439 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
PDE1A-201ENST00000351439 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
PDE1A-201ENST00000351439 XPCQ01831 940 aaPredicted RBP9.72□□□□□ -0.85
PDE1A-201ENST00000351439 NFE2L2Q16236 605 aa9.72□□□□□ -0.85
PDE1A-201ENST00000351439 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
PDE1A-201ENST00000351439 GCC1Q96CN9 775 aa9.72□□□□□ -0.85
PDE1A-201ENST00000351439 NEO1Q92859 1461 aa9.72□□□□□ -0.85
PDE1A-201ENST00000351439 DNAJC2Q99543 621 aaKnown RBP9.72□□□□□ -0.85
PDE1A-201ENST00000351439 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
PDE1A-201ENST00000351439 VGLL3A8MV65 326 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 ZNF445P59923 1031 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 CBX1P83916 185 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 ZNF428Q96B54 188 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 ARID3AQ99856 593 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 PTCH1Q13635 1447 aa9.71□□□□□ -0.85
PDE1A-201ENST00000351439 FAM83GA6ND36 823 aa9.71□□□□□ -0.86
PDE1A-201ENST00000351439 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
PDE1A-201ENST00000351439 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
PDE1A-201ENST00000351439 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.86
PDE1A-201ENST00000351439 ARHGAP45Q92619 1136 aa9.71□□□□□ -0.86
PDE1A-201ENST00000351439 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
PDE1A-201ENST00000351439 PIK3R4Q99570 1358 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 GNAI1P63096 354 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 RAB3GAP1Q15042 981 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 KLHL40Q2TBA0 621 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 TWISTNBQ3B726 338 aaPredicted RBP9.7□□□□□ -0.86
PDE1A-201ENST00000351439 CLEC17AQ6ZS10 378 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 GOLGA6L22H0YM25 854 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 IL13P35225 146 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 NME9Q86XW9 330 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 ZFP91Q96JP5 570 aaPredicted RBP9.7□□□□□ -0.86
PDE1A-201ENST00000351439 IFT57Q9NWB7 429 aa9.7□□□□□ -0.86
PDE1A-201ENST00000351439 ABCC4O15439 1325 aa9.69□□□□□ -0.86
PDE1A-201ENST00000351439 ZNF853P0CG23 659 aa9.69□□□□□ -0.86
PDE1A-201ENST00000351439 DCTN1Q14203 1278 aa9.69□□□□□ -0.86
PDE1A-201ENST00000351439 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
PDE1A-201ENST00000351439 IRX3P78415 501 aaPredicted RBP9.68□□□□□ -0.86
PDE1A-201ENST00000351439 RRS1Q15050 365 aaKnown RBP9.68□□□□□ -0.86
PDE1A-201ENST00000351439 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
PDE1A-201ENST00000351439 ATP7BP35670 1465 aa9.68□□□□□ -0.86
PDE1A-201ENST00000351439 GSPT1P15170 499 aaKnown RBP9.68□□□□□ -0.86
PDE1A-201ENST00000351439 GAS2L2Q8NHY3 880 aa9.68□□□□□ -0.86
PDE1A-201ENST00000351439 FEZ1Q99689 392 aa9.68□□□□□ -0.86
PDE1A-201ENST00000351439 CGNQ9P2M7 1197 aaKnown RBP9.68□□□□□ -0.86
PDE1A-201ENST00000351439 ATP2B3Q16720 1220 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 C16orf71Q8IYS4 520 aaPredicted RBP9.67□□□□□ -0.86
PDE1A-201ENST00000351439 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 CCDC66A2RUB6 948 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 SSFA2P28290 1259 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
PDE1A-201ENST00000351439 SETD1AO15047 1707 aaKnown RBP9.66□□□□□ -0.86
PDE1A-201ENST00000351439 CDC45O75419 566 aa9.66□□□□□ -0.86
PDE1A-201ENST00000351439 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
PDE1A-201ENST00000351439 GABPB1Q06547 395 aaPredicted RBP9.66□□□□□ -0.86
PDE1A-201ENST00000351439 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
PDE1A-201ENST00000351439 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
PDE1A-201ENST00000351439 CPSF1Q10570 1443 aaKnown RBP9.66□□□□□ -0.86
PDE1A-201ENST00000351439 RIMS2Q9UQ26 1411 aa9.66□□□□□ -0.86
PDE1A-201ENST00000351439 KIAA2012Q0VF49 1180 aa9.65□□□□□ -0.86
PDE1A-201ENST00000351439 API5Q9BZZ5 524 aaKnown RBP9.65□□□□□ -0.86
PDE1A-201ENST00000351439 TSPYL1Q9H0U9 437 aa9.65□□□□□ -0.86
PDE1A-201ENST00000351439 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
PDE1A-201ENST00000351439 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.86
PDE1A-201ENST00000351439 CPS1P31327 1500 aa9.65□□□□□ -0.87
PDE1A-201ENST00000351439 EDC4Q6P2E9 1401 aaKnown RBP9.65□□□□□ -0.87
PDE1A-201ENST00000351439 WASLO00401 505 aaPredicted RBP9.65□□□□□ -0.87
PDE1A-201ENST00000351439 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.87
PDE1A-201ENST00000351439 OTUD7AQ8TE49 926 aaPredicted RBP9.65□□□□□ -0.87
PDE1A-201ENST00000351439 DCTPP1Q9H773 170 aa9.65□□□□□ -0.87
PDE1A-201ENST00000351439 DLC1Q96QB1 1528 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 APBB1O00213 710 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
PDE1A-201ENST00000351439 COG3Q96JB2 828 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
PDE1A-201ENST00000351439 LMOD3Q0VAK6 560 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 TTC22Q5TAA0 569 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 TXNDC2Q86VQ3 553 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
PDE1A-201ENST00000351439 SECISBP2LQ93073 1101 aaKnown RBP9.64□□□□□ -0.87
PDE1A-201ENST00000351439 A2ML1A8K2U0 1454 aa9.63□□□□□ -0.87
PDE1A-201ENST00000351439 MON2Q7Z3U7 1717 aa9.63□□□□□ -0.87
PDE1A-201ENST00000351439 SMARCA5O60264 1052 aaPredicted RBP9.63□□□□□ -0.87
PDE1A-201ENST00000351439 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
PDE1A-201ENST00000351439 OGFRQ9NZT2 677 aa9.63□□□□□ -0.87
PDE1A-201ENST00000351439 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms