RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
SPNS2-201ENST00000329078 FAM135BQ49AJ0 1406 aa24.44■■□□□ 1.5
SPNS2-201ENST00000329078 KIAA1211Q6ZU35 1233 aa24.44■■□□□ 1.5
SPNS2-201ENST00000329078 ZNF692Q9BU19 519 aaPredicted RBP24.44■■□□□ 1.5
SPNS2-201ENST00000329078 SDSP20132 328 aa24.44■■□□□ 1.5
SPNS2-201ENST00000329078 ANP32BQ92688 251 aaKnown RBP24.44■■□□□ 1.5
SPNS2-201ENST00000329078 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
SPNS2-201ENST00000329078 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
SPNS2-201ENST00000329078 COL3A1P02461 1466 aaPredicted RBP24.43■■□□□ 1.5
SPNS2-201ENST00000329078 RBM25P49756 843 aaKnown RBP24.43■■□□□ 1.5
SPNS2-201ENST00000329078 ARHGAP45Q92619 1136 aa24.43■■□□□ 1.5
SPNS2-201ENST00000329078 IL1RAPL2Q9NP60 686 aa24.42■■□□□ 1.5
SPNS2-201ENST00000329078 MPNDQ8N594 471 aa24.42■■□□□ 1.5
SPNS2-201ENST00000329078 DTNBO60941 627 aa24.42■■□□□ 1.5
SPNS2-201ENST00000329078 RRP9O43818 475 aaKnown RBP24.41■■□□□ 1.5
SPNS2-201ENST00000329078 ARHGEF40Q8TER5 1519 aa24.41■■□□□ 1.5
SPNS2-201ENST00000329078 ZNF853P0CG23 659 aa24.41■■□□□ 1.5
SPNS2-201ENST00000329078 LTKP29376 864 aa24.41■■□□□ 1.5
SPNS2-201ENST00000329078 CEP85Q6P2H3 762 aa24.41■■□□□ 1.5
SPNS2-201ENST00000329078 ABCC4O15439 1325 aa24.41■■□□□ 1.5
SPNS2-201ENST00000329078 NEURL4Q96JN8 1562 aa24.4■■□□□ 1.5
SPNS2-201ENST00000329078 INTS3Q68E01 1043 aaKnown RBP24.4■■□□□ 1.5
SPNS2-201ENST00000329078 PKP1Q13835 747 aa24.4■■□□□ 1.5
SPNS2-201ENST00000329078 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
SPNS2-201ENST00000329078 MSH6P52701 1360 aa24.4■■□□□ 1.5
SPNS2-201ENST00000329078 ARHGAP31Q2M1Z3 1444 aa24.4■■□□□ 1.5
SPNS2-201ENST00000329078 ZMYM3Q14202 1370 aa24.39■■□□□ 1.5
SPNS2-201ENST00000329078 TTC22Q5TAA0 569 aa24.39■■□□□ 1.5
SPNS2-201ENST00000329078 ANO2Q9NQ90 1003 aa24.39■■□□□ 1.5
SPNS2-201ENST00000329078 AMOTL2Q9Y2J4 779 aa24.39■■□□□ 1.5
SPNS2-201ENST00000329078 KIF2CQ99661 725 aa24.39■■□□□ 1.49
SPNS2-201ENST00000329078 DCTPP1Q9H773 170 aa24.39■■□□□ 1.49
SPNS2-201ENST00000329078 HMMRO75330 724 aa24.38■■□□□ 1.49
SPNS2-201ENST00000329078 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
SPNS2-201ENST00000329078 ZGPATQ8N5A5 531 aaKnown RBP24.38■■□□□ 1.49
SPNS2-201ENST00000329078 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
SPNS2-201ENST00000329078 MAP3K19Q56UN5 1328 aa24.38■■□□□ 1.49
SPNS2-201ENST00000329078 ANXA1P04083 346 aa24.38■■□□□ 1.49
SPNS2-201ENST00000329078 R3HCC1Q9Y3T6 440 aaKnown RBP24.38■■□□□ 1.49
SPNS2-201ENST00000329078 MSNP26038 577 aaKnown RBP24.37■■□□□ 1.49
SPNS2-201ENST00000329078 NEK4P51957 841 aa24.37■■□□□ 1.49
SPNS2-201ENST00000329078 CAVIN1Q6NZI2 390 aaKnown RBP24.37■■□□□ 1.49
SPNS2-201ENST00000329078 ANKRD44Q8N8A2 993 aa24.36■■□□□ 1.49
SPNS2-201ENST00000329078 ABTB2Q8N961 1025 aa24.36■■□□□ 1.49
SPNS2-201ENST00000329078 NASPP49321 788 aaPredicted RBP24.36■■□□□ 1.49
SPNS2-201ENST00000329078 LARP6Q9BRS8 491 aaKnown RBP24.36■■□□□ 1.49
SPNS2-201ENST00000329078 HAP1P54257 671 aaPredicted RBP24.35■■□□□ 1.49
SPNS2-201ENST00000329078 XPCQ01831 940 aaPredicted RBP24.35■■□□□ 1.49
SPNS2-201ENST00000329078 ROBO2Q9HCK4 1378 aa24.35■■□□□ 1.49
SPNS2-201ENST00000329078 CFAP74Q9C0B2 1584 aa24.35■■□□□ 1.49
SPNS2-201ENST00000329078 UPF3BQ9BZI7 483 aaKnown RBP24.34■■□□□ 1.49
SPNS2-201ENST00000329078 A2ML1A8K2U0 1454 aa24.34■■□□□ 1.49
SPNS2-201ENST00000329078 CHL1O00533 1208 aa24.34■■□□□ 1.49
SPNS2-201ENST00000329078 PRPF40AO75400 957 aaKnown RBP24.34■■□□□ 1.49
SPNS2-201ENST00000329078 EYA1Q99502 592 aa24.34■■□□□ 1.49
SPNS2-201ENST00000329078 ST18O60284 1047 aa24.33■■□□□ 1.49
SPNS2-201ENST00000329078 OS9Q13438 667 aaPredicted RBP24.33■■□□□ 1.49
SPNS2-201ENST00000329078 RPAP2Q8IXW5 612 aaPredicted RBP24.33■■□□□ 1.48
SPNS2-201ENST00000329078 CPS1P31327 1500 aa24.33■■□□□ 1.48
SPNS2-201ENST00000329078 NUTM1Q86Y26 1132 aa24.32■■□□□ 1.48
SPNS2-201ENST00000329078 SNX21Q969T3 373 aa24.32■■□□□ 1.48
SPNS2-201ENST00000329078 ADGRB2O60241 1585 aa24.32■■□□□ 1.48
SPNS2-201ENST00000329078 MAP2P11137 1827 aaKnown RBP24.31■■□□□ 1.48
SPNS2-201ENST00000329078 PDE4CQ08493 712 aa24.31■■□□□ 1.48
SPNS2-201ENST00000329078 RAB3GAP1Q15042 981 aa24.31■■□□□ 1.48
SPNS2-201ENST00000329078 GNAI2P04899 355 aa24.3■■□□□ 1.48
SPNS2-201ENST00000329078 RABEP1Q15276 862 aa24.3■■□□□ 1.48
SPNS2-201ENST00000329078 LRRFIP2Q9Y608 721 aaKnown RBP24.3■■□□□ 1.48
SPNS2-201ENST00000329078 TMEM131LA2VDJ0 1609 aa24.3■■□□□ 1.48
SPNS2-201ENST00000329078 USP26Q9BXU7 913 aa24.29■■□□□ 1.48
SPNS2-201ENST00000329078 RBM27Q9P2N5 1060 aaKnown RBP24.29■■□□□ 1.48
SPNS2-201ENST00000329078 REC8O95072 547 aa24.29■■□□□ 1.48
SPNS2-201ENST00000329078 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
SPNS2-201ENST00000329078 FLIIQ13045 1269 aa24.28■■□□□ 1.48
SPNS2-201ENST00000329078 PNMA6EA0A0J9YXQ4 647 aa24.28■■□□□ 1.48
SPNS2-201ENST00000329078 RNF214Q8ND24 703 aa24.28■■□□□ 1.48
SPNS2-201ENST00000329078 SURF6O75683 361 aaKnown RBP24.27■■□□□ 1.48
SPNS2-201ENST00000329078 TNRQ92752 1358 aa24.27■■□□□ 1.48
SPNS2-201ENST00000329078 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
SPNS2-201ENST00000329078 DDX54Q8TDD1 881 aaKnown RBP24.26■■□□□ 1.47
SPNS2-201ENST00000329078 PREX1Q8TCU6 1659 aa24.26■■□□□ 1.47
SPNS2-201ENST00000329078 ERC2O15083 957 aa24.26■■□□□ 1.47
SPNS2-201ENST00000329078 PHAXQ9H814 394 aaKnown RBP24.26■■□□□ 1.47
SPNS2-201ENST00000329078 PDE1AP54750 535 aa24.25■■□□□ 1.47
SPNS2-201ENST00000329078 USP32Q8NFA0 1604 aa24.25■■□□□ 1.47
SPNS2-201ENST00000329078 LRRCC1Q9C099 1032 aa24.25■■□□□ 1.47
SPNS2-201ENST00000329078 PRDM10Q9NQV6 1147 aa24.25■■□□□ 1.47
SPNS2-201ENST00000329078 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
SPNS2-201ENST00000329078 BRPF1P55201 1214 aaPredicted RBP24.24■■□□□ 1.47
SPNS2-201ENST00000329078 GDPD2Q9HCC8 539 aa24.24■■□□□ 1.47
SPNS2-201ENST00000329078 UBTFL1P0CB47 393 aaPredicted RBP24.24■■□□□ 1.47
SPNS2-201ENST00000329078 ATP7BP35670 1465 aa24.24■■□□□ 1.47
SPNS2-201ENST00000329078 ZHX1Q9UKY1 873 aaPredicted RBP24.23■■□□□ 1.47
SPNS2-201ENST00000329078 PTCH1Q13635 1447 aa24.23■■□□□ 1.47
SPNS2-201ENST00000329078 CIZ1Q9ULV3 898 aaPredicted RBP24.23■■□□□ 1.47
SPNS2-201ENST00000329078 CCDC30Q5VVM6 783 aa24.23■■□□□ 1.47
SPNS2-201ENST00000329078 CPSF1Q10570 1443 aaKnown RBP24.22■■□□□ 1.47
SPNS2-201ENST00000329078 GNAT3A8MTJ3 354 aa24.22■■□□□ 1.47
SPNS2-201ENST00000329078 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
SPNS2-201ENST00000329078 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms