RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 CT47B1P0C2W7 299 aaPredicted RBP20.42■□□□□ 0.86
LMNB2-201ENST00000325327 PI4KAP1Q8N8J0 262 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 CEP126Q9P2H0 1117 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 FLIIQ13045 1269 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 AMOTL1Q8IY63 956 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 A0A087WZG4 1122 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
LMNB2-201ENST00000325327 REC8O95072 547 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 KDM6BO15054 1643 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 CDK11BP21127 795 aaKnown RBP20.41■□□□□ 0.86
LMNB2-201ENST00000325327 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
LMNB2-201ENST00000325327 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.866e-7■■■■■ 35.3
LMNB2-201ENST00000325327 TRPM2O94759 1503 aa20.4■□□□□ 0.86
LMNB2-201ENST00000325327 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
LMNB2-201ENST00000325327 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
LMNB2-201ENST00000325327 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.86
LMNB2-201ENST00000325327 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.86
LMNB2-201ENST00000325327 TRDNQ13061 729 aa20.39■□□□□ 0.85
LMNB2-201ENST00000325327 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
LMNB2-201ENST00000325327 PUS7Q96PZ0 661 aaKnown RBP20.39■□□□□ 0.85
LMNB2-201ENST00000325327 GZF1Q9H116 711 aaPredicted RBP20.39■□□□□ 0.85
LMNB2-201ENST00000325327 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
LMNB2-201ENST00000325327 CLSTN1O94985 981 aa20.38■□□□□ 0.85
LMNB2-201ENST00000325327 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
LMNB2-201ENST00000325327 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
LMNB2-201ENST00000325327 AACSQ86V21 672 aa20.38■□□□□ 0.85
LMNB2-201ENST00000325327 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
LMNB2-201ENST00000325327 TBC1D2BQ9UPU7 963 aa20.37■□□□□ 0.85
LMNB2-201ENST00000325327 CCDC158Q5M9N0 1113 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 LRRCC1Q9C099 1032 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 MAP3K2Q9Y2U5 619 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 TTC39AQ5SRH9 613 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 C8orf58Q8NAV2 365 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 AKAP4Q5JQC9 854 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 CHPF2Q9P2E5 772 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
LMNB2-201ENST00000325327 RFC4P35249 363 aa20.36■□□□□ 0.85
LMNB2-201ENST00000325327 ADCY10Q96PN6 1610 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 CFAP74Q9C0B2 1584 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 KDM4AO75164 1064 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
LMNB2-201ENST00000325327 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
LMNB2-201ENST00000325327 ABCF2Q9UG63 623 aa20.35■□□□□ 0.85
LMNB2-201ENST00000325327 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 TRIM27P14373 513 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 IGHMBP2P38935 993 aaKnown RBP20.34■□□□□ 0.85
LMNB2-201ENST00000325327 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 EFCAB6Q5THR3 1501 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 METTL24Q5JXM2 366 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 RASSF8Q8NHQ8 419 aa20.34■□□□□ 0.85
LMNB2-201ENST00000325327 LRRFIP2Q9Y608 721 aaKnown RBP20.34■□□□□ 0.85
LMNB2-201ENST00000325327 AKAP17AQ02040 695 aaKnown RBP20.33■□□□□ 0.85
LMNB2-201ENST00000325327 FAM184AQ8NB25 1140 aa20.33■□□□□ 0.85
LMNB2-201ENST00000325327 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
LMNB2-201ENST00000325327 USP21Q9UK80 565 aa20.33■□□□□ 0.85
LMNB2-201ENST00000325327 NFXL1Q6ZNB6 911 aa20.33■□□□□ 0.85
LMNB2-201ENST00000325327 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.84
LMNB2-201ENST00000325327 FOSBP53539 338 aa20.33■□□□□ 0.84
LMNB2-201ENST00000325327 CNTROBQ8N137 903 aa20.33■□□□□ 0.84
LMNB2-201ENST00000325327 SMARCA5O60264 1052 aaPredicted RBP20.33■□□□□ 0.84
LMNB2-201ENST00000325327 MARCH6O60337 910 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 MCTP1Q6DN14 999 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 CHMP4CQ96CF2 233 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RRP12Q5JTH9 1297 aaKnown RBP20.32■□□□□ 0.84
LMNB2-201ENST00000325327 ANKRD13DQ6ZTN6 518 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
LMNB2-201ENST00000325327 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 CPLX1O14810 134 aa20.32■□□□□ 0.84
LMNB2-201ENST00000325327 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
LMNB2-201ENST00000325327 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
LMNB2-201ENST00000325327 ERVK-7P63135 1459 aa20.31■□□□□ 0.84
LMNB2-201ENST00000325327 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 TRIM44Q96DX7 344 aaPredicted RBP20.3■□□□□ 0.84
LMNB2-201ENST00000325327 GNL3LQ9NVN8 582 aaKnown RBP20.3■□□□□ 0.84
LMNB2-201ENST00000325327 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
LMNB2-201ENST00000325327 LGR6Q9HBX8 967 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 H3BQV1 296 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 AAMPQ13685 434 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
LMNB2-201ENST00000325327 PARD3Q8TEW0 1356 aa20.29■□□□□ 0.84
LMNB2-201ENST00000325327 IFIT5Q13325 482 aaKnown RBP20.29■□□□□ 0.84
LMNB2-201ENST00000325327 SIRT1Q96EB6 747 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms