RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
SH3PXD2A-201ENST00000315994 PTPRCP08575 1304 aa15.4■□□□□ 0.06
SH3PXD2A-201ENST00000315994 TESK2Q96S53 571 aa15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 MSH6P52701 1360 aa15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 SLC3A2P08195 630 aaKnown RBP15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 XBP1P17861 261 aa15.39■□□□□ 0.05
SH3PXD2A-201ENST00000315994 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TPM2P07951 284 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ABCC1P33527 1531 aa15.38■□□□□ 0.05
SH3PXD2A-201ENST00000315994 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 FOSBP53539 338 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 C20orf194Q5TEA3 1177 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 KIF1BPQ96EK5 621 aa15.37■□□□□ 0.05
SH3PXD2A-201ENST00000315994 PDCP20941 246 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 CYP46A1Q9Y6A2 500 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 PTCD1O75127 700 aaKnown RBP15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 IFNL2Q8IZJ0 200 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 NEO1Q92859 1461 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 PES1O00541 588 aaKnown RBP15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ANKRD1Q15327 319 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
SH3PXD2A-201ENST00000315994 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TPM3P06753 285 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TPM1P09493 284 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TRIM27P14373 513 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 IL27Q8NEV9 243 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
SH3PXD2A-201ENST00000315994 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 MYD88Q99836 296 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 ABCA8O94911 1581 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 SASS6Q6UVJ0 657 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 PRM3Q9NNZ6 103 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 NPHP3Q7Z494 1330 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 NPATQ14207 1427 aa15.34■□□□□ 0.05
SH3PXD2A-201ENST00000315994 GCC2Q8IWJ2 1684 aa15.33■□□□□ 0.05
SH3PXD2A-201ENST00000315994 IGHMBP2P38935 993 aaKnown RBP15.33■□□□□ 0.05
SH3PXD2A-201ENST00000315994 FLIIQ13045 1269 aa15.33■□□□□ 0.05
SH3PXD2A-201ENST00000315994 TRPM2O94759 1503 aa15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ADAMTS2O95450 1211 aa15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ZFYVE9O95405 1425 aa15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 MX1P20591 662 aa15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.041e-8■□□□□ 10.7
SH3PXD2A-201ENST00000315994 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ANKRD20A12PQ8NF67 263 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 K7ELQ4 463 aaPredicted RBP15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 EXOC5O00471 708 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 HSP90AB3PQ58FF7 597 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 MYO5CQ9NQX4 1742 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 FAM83GA6ND36 823 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 F6X3S4 739 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 AKAP2Q9Y2D5 859 aa15.32■□□□□ 0.04
SH3PXD2A-201ENST00000315994 FBLN1P23142 703 aa15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
SH3PXD2A-201ENST00000315994 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
SH3PXD2A-201ENST00000315994 A0A1W2PP64 1363 aa15.3■□□□□ 0.04
SH3PXD2A-201ENST00000315994 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
SH3PXD2A-201ENST00000315994 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
SH3PXD2A-201ENST00000315994 MBD3O95983 291 aa15.3■□□□□ 0.04
SH3PXD2A-201ENST00000315994 FLT4P35916 1363 aa15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 KRT32Q14532 448 aa15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 LRRFIP2Q9Y608 721 aaKnown RBP15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 EIF4A2Q14240 407 aaKnown RBP15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 METTL24Q5JXM2 366 aa15.29■□□□□ 0.04
SH3PXD2A-201ENST00000315994 CEP89Q96ST8 783 aa15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 LETM1O95202 739 aaPredicted RBP15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 BLOC1S2Q6QNY1 142 aa15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
SH3PXD2A-201ENST00000315994 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms