RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
PTPRO-201ENST00000281171 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
PTPRO-201ENST00000281171 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 URI1O94763 535 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-201ENST00000281171 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
PTPRO-201ENST00000281171 HIP1O00291 1037 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 CCDC183Q5T5S1 534 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 NUP62CLQ9H1M0 184 aa16.87■□□□□ 0.29
PTPRO-201ENST00000281171 LRRFIP2Q9Y608 721 aaKnown RBP16.87■□□□□ 0.29
PTPRO-201ENST00000281171 SERPINC1P01008 464 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
PTPRO-201ENST00000281171 CLASRPQ8N2M8 674 aaKnown RBP16.86■□□□□ 0.29
PTPRO-201ENST00000281171 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 V9GYY5 206 aaPredicted RBP16.86■□□□□ 0.29
PTPRO-201ENST00000281171 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
PTPRO-201ENST00000281171 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
PTPRO-201ENST00000281171 ADCY5O95622 1261 aa16.85■□□□□ 0.29
PTPRO-201ENST00000281171 MAP2K2P36507 400 aa16.84■□□□□ 0.29
PTPRO-201ENST00000281171 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
PTPRO-201ENST00000281171 CEP57L1Q8IYX8 460 aa16.84■□□□□ 0.29
PTPRO-201ENST00000281171 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTPRO-201ENST00000281171 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
PTPRO-201ENST00000281171 ELL2O00472 640 aaPredicted RBP16.83■□□□□ 0.29
PTPRO-201ENST00000281171 KRT85P78386 507 aa16.83■□□□□ 0.29
PTPRO-201ENST00000281171 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.29
PTPRO-201ENST00000281171 CASQ1P31415 396 aa16.83■□□□□ 0.29
PTPRO-201ENST00000281171 CPLX1O14810 134 aa16.83■□□□□ 0.28
PTPRO-201ENST00000281171 CCDC181Q5TID7 509 aa16.83■□□□□ 0.28
PTPRO-201ENST00000281171 PPFIBP1Q86W92 1011 aa16.83■□□□□ 0.28
PTPRO-201ENST00000281171 ERICH2A1L162 156 aa16.83■□□□□ 0.28
PTPRO-201ENST00000281171 CAPN2P17655 700 aa16.83■□□□□ 0.28
PTPRO-201ENST00000281171 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
PTPRO-201ENST00000281171 PSMA5P28066 241 aa16.82■□□□□ 0.28
PTPRO-201ENST00000281171 BCCIPQ9P287 314 aaKnown RBP eCLIP16.82■□□□□ 0.28
PTPRO-201ENST00000281171 PPM1EQ8WY54 764 aa16.82■□□□□ 0.28
PTPRO-201ENST00000281171 KRBA2Q6ZNG9 492 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 ATP6V1AP38606 617 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 FMNL3Q8IVF7 1028 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 CCDC148Q8NFR7 591 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 RSRC1Q96IZ7 334 aaKnown RBP16.81■□□□□ 0.28
PTPRO-201ENST00000281171 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
PTPRO-201ENST00000281171 HSPA4P34932 840 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 WDR66Q8TBY9 1149 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 ARFGAP3Q9NP61 516 aa16.81■□□□□ 0.28
PTPRO-201ENST00000281171 MYRIPQ8NFW9 859 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
PTPRO-201ENST00000281171 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
PTPRO-201ENST00000281171 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 NLRP6P59044 892 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 ZSCAN23Q3MJ62 389 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
PTPRO-201ENST00000281171 SAFBQ15424 915 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTPRO-201ENST00000281171 VPS37DQ86XT2 251 aa16.79■□□□□ 0.28
PTPRO-201ENST00000281171 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
PTPRO-201ENST00000281171 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
PTPRO-201ENST00000281171 EBAG9O00559 213 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
PTPRO-201ENST00000281171 GSDMDP57764 484 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 RIC3Q7Z5B4 369 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 SSFA2P28290 1259 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
PTPRO-201ENST00000281171 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
PTPRO-201ENST00000281171 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 CEP57Q86XR8 500 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 UPF3BQ9BZI7 483 aaKnown RBP16.78■□□□□ 0.28
PTPRO-201ENST00000281171 NAA25Q14CX7 972 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
PTPRO-201ENST00000281171 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
PTPRO-201ENST00000281171 MTHFSP49914 203 aa16.77■□□□□ 0.28
PTPRO-201ENST00000281171 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
PTPRO-201ENST00000281171 SLU7O95391 586 aaKnown RBP16.77■□□□□ 0.28
PTPRO-201ENST00000281171 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.28
PTPRO-201ENST00000281171 ARHGAP29Q52LW3 1261 aa16.77■□□□□ 0.28
PTPRO-201ENST00000281171 AP1ARQ63HQ0 302 aa16.77■□□□□ 0.28
PTPRO-201ENST00000281171 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.28
PTPRO-201ENST00000281171 ERBINQ96RT1 1412 aa16.77■□□□□ 0.27
PTPRO-201ENST00000281171 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.27
PTPRO-201ENST00000281171 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.27
PTPRO-201ENST00000281171 TMX1Q9H3N1 280 aa16.77■□□□□ 0.27
PTPRO-201ENST00000281171 CABP2Q9NPB3 220 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 TUBB4AP04350 444 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 XBP1P17861 261 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 CFAP70Q5T0N1 1121 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 EFCC1Q9HA90 598 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
PTPRO-201ENST00000281171 CTDP1Q9Y5B0 961 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms