RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Gnai1B2RSH2 354 aa21.46■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Gtf2a1Q99PM3 378 aa21.46■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Rwdd1Q9CQK7 243 aa21.46■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Gnai3Q9DC51 354 aa21.46■■□□□ 1.03
Hoxc4-202ENSMUST00000165375 Ankrd50F7BE84 1390 aa21.45■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Rbm25B2RY56 838 aaKnown RBP21.45■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Ppp1r37Q8BKR5 712 aa21.45■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Marf1Q8BJ34 1730 aaKnown RBP21.45■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Rtf1A2AQ19 715 aaKnown RBP21.44■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Qtrt2B8ZXI1 415 aa21.44■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Smim5Q8BT42 78 aa21.44■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Amotl1Q9D4H4 968 aa21.44■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 EspnQ9ET47 871 aa21.44■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Slx1bQ8BX32 270 aa21.43■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Simc1E9Q6E9 1354 aa21.43■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Gm10471E9Q1C7 252 aa21.42■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 CastP51125 788 aa21.42■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 RgmbQ7TQ33 436 aa21.42■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Cdc37l1Q9CZP7 335 aa21.42■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Trpm3Q5F4S9 1721 aa21.42■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Kdm2bQ6P1G2 1309 aa21.41■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Znf526Q8BI66 675 aa21.41■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Plekhd1B2RPU2 505 aa21.4■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Zfp142G5E869 1843 aa21.39■■□□□ 1.02
Hoxc4-202ENSMUST00000165375 Arhgef1Q61210 920 aaKnown RBP21.39■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Slit1Q80TR4 1531 aa21.39■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 AU015836B2RUM3 263 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Zranb3Q6NZP1 1069 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Lrrc59Q922Q8 307 aaKnown RBP21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Polr3glQ8R0C0 218 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Trim26Q99PN3 545 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Bcl2l12Q9D3J3 255 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Arfgef2A2A5R2 1792 aa21.38■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Ddx54Q8K4L0 874 aaKnown RBP21.37■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 ThemisQ8BGW0 636 aa21.36■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Usp16Q99LG0 825 aa21.36■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Ahnak2E9PYB0 1738 aaKnown RBP21.36■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Sos1Q62245 1319 aa21.36■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Snap23O09044 210 aa21.35■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Pard3Q99NH2 1333 aa21.35■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Tmc1Q8R4P5 757 aa21.35■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Ccdc171E9Q1U1 1324 aa21.34■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Nup153E9Q3G8 1462 aaKnown RBP21.34■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Zpr1Q62384 459 aa21.34■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Slc5a4bQ91ZP4 660 aa21.34■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 U2surpQ6NV83 1029 aaKnown RBP21.34■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 4933402E13RikQ9D4D2 429 aa21.33■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Apbb1Q9QXJ1 710 aa21.33■■□□□ 1.01
Hoxc4-202ENSMUST00000165375 Rrp9Q91WM3 475 aaKnown RBP21.32■■□□□ 1
Hoxc4-202ENSMUST00000165375 Klhdc4Q921I2 584 aa21.32■■□□□ 1
Hoxc4-202ENSMUST00000165375 FocadA2AKG8 1798 aa21.32■■□□□ 1
Hoxc4-202ENSMUST00000165375 Ggnbp2Q5SV77 696 aa21.31■■□□□ 1
Hoxc4-202ENSMUST00000165375 Ccdc60Q8C4J0 545 aa21.31■■□□□ 1
Hoxc4-202ENSMUST00000165375 Cc2d1aQ8K1A6 943 aa21.31■■□□□ 1
Hoxc4-202ENSMUST00000165375 Aox2Q5SGK3 1345 aa21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 Vamp4O70480 141 aa21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 Prim1P20664 417 aa21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 B4galnt3Q6L8S8 986 aa21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 4930572O03RikQ8C5Y0 211 aa21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 Senp3Q9EP97 568 aaKnown RBP21.3■■□□□ 1
Hoxc4-202ENSMUST00000165375 Zeb2Q9R0G7 1215 aa21.29■■□□□ 1
Hoxc4-202ENSMUST00000165375 Abcc12Q80WJ6 1366 aa21.29■■□□□ 1
Hoxc4-202ENSMUST00000165375 Gm6268A2A3U9 297 aa21.28■■□□□ 1
Hoxc4-202ENSMUST00000165375 G3bp1P97855 465 aaKnown RBP21.28■■□□□ 1
Hoxc4-202ENSMUST00000165375 Htatsf1Q8BGC0 757 aa21.28■■□□□ 1
Hoxc4-202ENSMUST00000165375 Chmp5Q9D7S9 219 aa21.28■■□□□ 1
Hoxc4-202ENSMUST00000165375 Fam50bQ9WTJ8 334 aa21.27■■□□□ 1
Hoxc4-202ENSMUST00000165375 Foxp4Q9DBY0 795 aaKnown RBP21.26■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Trim58Q5NCC9 485 aa21.25■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Smc5Q8CG46 1101 aaKnown RBP21.25■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Ggt6Q6PDE7 497 aa21.24■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Pdzd9Q9D9M4 266 aa21.24■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 1700019A02RikA0A087WPV9 146 aa21.23■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Kif20aP97329 887 aa21.23■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Phkg2Q9DB30 406 aa21.23■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Plekhm2Q80TQ5 1018 aa21.23■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 KarsQ99MN1 595 aaKnown RBP21.23■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Igsf1Q7TQA1 1317 aa21.22■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Pibf1E9Q6K3 756 aa21.22■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Ipo8Q7TMY7 1010 aa21.22■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Phf14Q9D4H9 881 aa21.22■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Tns2Q8CGB6 1400 aa21.21■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Chmp7Q8R1T1 451 aa21.21■□□□□ 0.99
Hoxc4-202ENSMUST00000165375 Tnks1bp1P58871 1720 aa21.2■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Cavin2Q63918 418 aaKnown RBP21.2■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Eif3bQ8JZQ9 803 aaKnown RBP21.2■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Pank1Q8K4K6 548 aa21.2■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Ppp1r9bQ6R891 817 aaKnown RBP21.19■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Adgrb1Q3UHD1 1582 aa21.19■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Speer4bQ9D9F7 267 aa21.19■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Nkx2-3P97334 362 aa21.18■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Q3TQI7 289 aaKnown RBP21.17■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Btbd11Q6GQW0 1109 aa21.17■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Tmco5bQ80X59 307 aa21.17■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Ssfa2Q922B9 1252 aa21.17■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Myo5bP21271 1818 aa21.17■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Gm21680A0A0G2JGR8 267 aa21.16■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Rangap1P46061 589 aaKnown RBP21.16■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Chl1P70232 1209 aa21.16■□□□□ 0.98
Hoxc4-202ENSMUST00000165375 Nectin2P32507 530 aa21.15■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms