RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Farp2Q91VS8 1065 aa8.69□□□□□ -1.02
Chm-202ENSMUST00000113388 Tpd52l1O54818 204 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Ercc3P49135 783 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Igsf3Q6ZQA6 1194 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Sugp2Q8CH09 1067 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Apbb1Q9QXJ1 710 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 CenpjQ569L8 1344 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Cep63Q3UPP8 700 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Smg6P61406 1418 aaKnown RBP8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Nyap1Q6PFX7 833 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Mphosph10Q810V0 681 aaKnown RBP8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Ddx54Q8K4L0 874 aaKnown RBP8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Themis2Q91YX0 663 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Dhx16G3X8X0 1044 aaKnown RBP8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Mapk8ip3Q9ESN9 1337 aa8.68□□□□□ -1.02
Chm-202ENSMUST00000113388 Fam193aQ8CGI1 1231 aaKnown RBP8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Zmynd15Q8C0R7 736 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Gps2Q921N8 327 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Plxnc1Q9QZC2 1574 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Tubgcp6G5E8P0 1769 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Myom1Q62234 1667 aaKnown RBP8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 CgnP59242 1191 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Sass6Q80UK7 654 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Suds3Q8BR65 328 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Pik3r4Q8VD65 1358 aa8.67□□□□□ -1.02
Chm-202ENSMUST00000113388 Mfap1aC0HKD8 439 aaKnown RBP8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Mfap1bC0HKD9 439 aaKnown RBP8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Dync1i1O88485 628 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Gsto1O09131 240 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Paip2Q9D6V8 124 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Ccdc97Q9DBT3 340 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Nbr1P97432 988 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Smc2Q8CG48 1191 aaKnown RBP8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Grpel1Q99LP6 217 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Ubap1lG3UW59 384 aa8.66□□□□□ -1.02
Chm-202ENSMUST00000113388 Prkrip1Q9CWV6 186 aaKnown RBP8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Kdm5aQ3UXZ9 1690 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Chrm1P12657 460 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Gzf1Q4VBD9 706 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Exoc6Q8R313 802 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Mbd5B1AYB6 1498 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Fyb1O35601 819 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Slc35g1Q8BY79 368 aa8.65□□□□□ -1.02
Chm-202ENSMUST00000113388 Pik3c2bE9QAN8 1632 aa8.65□□□□□ -1.03
Chm-202ENSMUST00000113388 U2af2P26369 475 aaKnown RBP8.65□□□□□ -1.03
Chm-202ENSMUST00000113388 Map2k1P31938 393 aa8.65□□□□□ -1.03
Chm-202ENSMUST00000113388 Kcna4Q61423 654 aa8.65□□□□□ -1.03
Chm-202ENSMUST00000113388 Ankrd24Q80VM7 985 aa8.64□□□□□ -1.03
Chm-202ENSMUST00000113388 Nkx1-2P42580 305 aa8.64□□□□□ -1.03
Chm-202ENSMUST00000113388 Synpo2Q91YE8 1087 aaKnown RBP8.64□□□□□ -1.03
Chm-202ENSMUST00000113388 Kif24Q6NWW5 1356 aa8.64□□□□□ -1.03
Chm-202ENSMUST00000113388 Gm45140A0A0N4SUM8 220 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Tpm3P21107 285 aaKnown RBP8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Fbln2P37889 1221 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Serpina10Q8R121 448 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Irx5Q9JKQ4 484 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Hs1bp3Q3TC93 395 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Nol10Q5RJG1 687 aaKnown RBP8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Rnf214Q8BFU3 668 aaKnown RBP8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Cspp1B2RX88 1205 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Kif2aP28740 705 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Atp6v1aP50516 617 aaKnown RBP8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Tmco5bQ80X59 307 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Rab11fip3Q8CHD8 1047 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Ccdc83Q9D4V3 305 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Cpsf1Q9EPU4 1441 aaKnown RBP8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 Setd1aE9PYH6 1716 aa8.63□□□□□ -1.03
Chm-202ENSMUST00000113388 1700122O11RikJ3QPW6 241 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Ica1lQ3TY65 431 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 MecomP14404 1042 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Pcmtd1P59913 357 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Cep152A2AUM9 1736 aaKnown RBP8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 TrdnE9Q9K5 693 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Mis12Q9CY25 206 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Thsd7aQ69ZU6 1645 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Eno4Q8C042 619 aa8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Sf3a1Q8K4Z5 791 aaKnown RBP8.62□□□□□ -1.03
Chm-202ENSMUST00000113388 Cpsf2O35218 782 aaKnown RBP8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Cavin1O54724 392 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Atp2b1G5E829 1220 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 EzrP26040 586 aaKnown RBP8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Nphp4P59240 1425 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Tnpo1Q8BFY9 898 aaKnown RBP8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Cdk5rap2Q8K389 1822 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Ift172Q6VH22 1749 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Serpinb6bO08804 377 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Nectin2P32507 530 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Zbtb38Q3LR78 1197 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Vps37dQ810I0 261 aa8.61□□□□□ -1.03
Chm-202ENSMUST00000113388 Rfx1P48377 963 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Kcna6Q61923 529 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Prdm4Q80V63 803 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Dixdc1Q80Y83 711 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Sirt1Q923E4 737 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 C3P01027 1663 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Rreb1Q3UH06 1700 aaKnown RBP8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Gm21190A0A0G2JGJ6 266 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Tpm1P58771 284 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Rwdd1Q9CQK7 243 aa8.6□□□□□ -1.03
Chm-202ENSMUST00000113388 Gtpbp6Q3U6U5 514 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms