Protein–RNA interactions for Protein: G5E829

Atp2b1, Plasma membrane calcium-transporting ATPase 1, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2b1G5E829 Gm25239-201ENSMUST00000174915 86 ntBASIC42.1■■■■■ 4.33
Atp2b1G5E829 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Atp2b1G5E829 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
Atp2b1G5E829 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Atp2b1G5E829 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Atp2b1G5E829 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.63■■■■□ 3.61
Atp2b1G5E829 Gm15042-201ENSMUST00000120212 883 ntBASIC36.71■■■■□ 3.47
Atp2b1G5E829 Psd-208ENSMUST00000224556 2034 ntBASIC36.53■■■■□ 3.44
Atp2b1G5E829 Gm24109-201ENSMUST00000175489 103 ntBASIC36.51■■■■□ 3.44
Atp2b1G5E829 Gm15045-201ENSMUST00000117359 883 ntBASIC35.92■■■■□ 3.34
Atp2b1G5E829 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Atp2b1G5E829 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Atp2b1G5E829 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Atp2b1G5E829 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Atp2b1G5E829 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.51■■■■□ 3.28
Atp2b1G5E829 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Atp2b1G5E829 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Atp2b1G5E829 Gm23366-201ENSMUST00000175022 89 ntBASIC35.12■■■■□ 3.21
Atp2b1G5E829 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Atp2b1G5E829 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Atp2b1G5E829 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Atp2b1G5E829 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Atp2b1G5E829 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Atp2b1G5E829 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.86■■■■□ 3.17
Atp2b1G5E829 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Atp2b1G5E829 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Atp2b1G5E829 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Atp2b1G5E829 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Atp2b1G5E829 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Atp2b1G5E829 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Atp2b1G5E829 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.07■■■■□ 3.04
Atp2b1G5E829 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
Atp2b1G5E829 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
Atp2b1G5E829 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Atp2b1G5E829 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
Atp2b1G5E829 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.92■■■■□ 3.02
Atp2b1G5E829 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.84■■■■□ 3.01
Atp2b1G5E829 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Atp2b1G5E829 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.8■■■■□ 3
Atp2b1G5E829 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Atp2b1G5E829 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC33.71■■■□□ 2.99
Atp2b1G5E829 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Atp2b1G5E829 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.67■■■□□ 2.98
Atp2b1G5E829 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.58■■■□□ 2.97
Atp2b1G5E829 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Atp2b1G5E829 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.49■■■□□ 2.95
Atp2b1G5E829 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Atp2b1G5E829 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Atp2b1G5E829 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.37■■■□□ 2.93
Atp2b1G5E829 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Atp2b1G5E829 Gm25238-201ENSMUST00000174914 89 ntBASIC33.27■■■□□ 2.92
Atp2b1G5E829 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.2■■■□□ 2.91
Atp2b1G5E829 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Atp2b1G5E829 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.04■■■□□ 2.88
Atp2b1G5E829 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Atp2b1G5E829 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Atp2b1G5E829 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.94■■■□□ 2.86
Atp2b1G5E829 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Atp2b1G5E829 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Atp2b1G5E829 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.82■■■□□ 2.84
Atp2b1G5E829 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Atp2b1G5E829 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Atp2b1G5E829 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
Atp2b1G5E829 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.43■■■□□ 2.78
Atp2b1G5E829 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Atp2b1G5E829 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Atp2b1G5E829 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.39■■■□□ 2.78
Atp2b1G5E829 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Atp2b1G5E829 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Atp2b1G5E829 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Atp2b1G5E829 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Atp2b1G5E829 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Atp2b1G5E829 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Atp2b1G5E829 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Atp2b1G5E829 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Atp2b1G5E829 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Atp2b1G5E829 Gm27325-201ENSMUST00000175467 74 ntBASIC32.19■■■□□ 2.74
Atp2b1G5E829 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.18■■■□□ 2.74
Atp2b1G5E829 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.18■■■□□ 2.74
Atp2b1G5E829 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
Atp2b1G5E829 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Atp2b1G5E829 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
Atp2b1G5E829 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.01■■■□□ 2.71
Atp2b1G5E829 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Atp2b1G5E829 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.95■■■□□ 2.7
Atp2b1G5E829 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Atp2b1G5E829 Gm25262-201ENSMUST00000174934 133 ntBASIC31.86■■■□□ 2.69
Atp2b1G5E829 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Atp2b1G5E829 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.83■■■□□ 2.69
Atp2b1G5E829 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Atp2b1G5E829 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Atp2b1G5E829 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Atp2b1G5E829 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Atp2b1G5E829 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Atp2b1G5E829 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Atp2b1G5E829 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Atp2b1G5E829 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Atp2b1G5E829 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Atp2b1G5E829 Rab21-202ENSMUST00000218831 843 ntBASIC31.61■■■□□ 2.65
Atp2b1G5E829 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms