RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Bcl11aQ9QYE3 773 aa19.48■□□□□ 0.71
Vcan-201ENSMUST00000109543 Ptpn23Q6PB44 1692 aa19.48■□□□□ 0.71
Vcan-201ENSMUST00000109543 Triml2E9PW10 424 aa19.47■□□□□ 0.71
Vcan-201ENSMUST00000109543 C3P01027 1663 aa19.47■□□□□ 0.71
Vcan-201ENSMUST00000109543 Wdr63B2RY71 923 aa19.47■□□□□ 0.71
Vcan-201ENSMUST00000109543 Tmem132eQ6IEE6 982 aa19.47■□□□□ 0.71
Vcan-201ENSMUST00000109543 HnrnpuQ8VEK3 800 aaKnown RBP19.46■□□□□ 0.71
Vcan-201ENSMUST00000109543 Kif2cQ922S8 721 aa19.46■□□□□ 0.71
Vcan-201ENSMUST00000109543 Rad17Q6NXW6 688 aa19.45■□□□□ 0.7
Vcan-201ENSMUST00000109543 Trpm3Q5F4S9 1721 aa19.44■□□□□ 0.7
Vcan-201ENSMUST00000109543 Fgd1P52734 960 aa19.44■□□□□ 0.7
Vcan-201ENSMUST00000109543 Sv2bQ8BG39 683 aa19.43■□□□□ 0.7
Vcan-201ENSMUST00000109543 Tm6sf1P58749 370 aa19.43■□□□□ 0.7
Vcan-201ENSMUST00000109543 Eif4g2Q62448 906 aaKnown RBP19.43■□□□□ 0.7
Vcan-201ENSMUST00000109543 HypkQ9CR41 129 aa19.43■□□□□ 0.7
Vcan-201ENSMUST00000109543 Ano8Q6PB70 1060 aa19.42■□□□□ 0.7
Vcan-201ENSMUST00000109543 Cgnl1Q6AW69 1298 aa19.42■□□□□ 0.7
Vcan-201ENSMUST00000109543 Ccdc146E9Q9F7 977 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Prkar2bP31324 416 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Fam13aQ8BGI4 693 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Aldh8a1Q8BH00 487 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Phf23Q8BSN5 401 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Topaz1E5FYH1 1653 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Tns3Q5SSZ5 1440 aa19.41■□□□□ 0.7
Vcan-201ENSMUST00000109543 Igsf1Q7TQA1 1317 aa19.4■□□□□ 0.7
Vcan-201ENSMUST00000109543 Q3TQI7 289 aaKnown RBP19.4■□□□□ 0.7
Vcan-201ENSMUST00000109543 FanclQ9CR14 375 aa19.4■□□□□ 0.7
Vcan-201ENSMUST00000109543 Ncapd2Q8K2Z4 1392 aa19.39■□□□□ 0.7
Vcan-201ENSMUST00000109543 Tbc1d9Q3UYK3 1264 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Ccdc9Q8VC31 543 aaKnown RBP19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Foxp4Q9DBY0 795 aaKnown RBP19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Nek4Q9Z1J2 792 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Msh6P54276 1358 aaKnown RBP19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Tmem2Q5FWI3 1383 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Sipa1l2Q80TE4 1722 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 4933416C03RikQ3V063 378 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Fam83gQ5SWY7 812 aa19.39■□□□□ 0.69
Vcan-201ENSMUST00000109543 Col14a1Q80X19 1797 aa19.38■□□□□ 0.69
Vcan-201ENSMUST00000109543 Ahnak2E9PYB0 1738 aaKnown RBP19.38■□□□□ 0.69
Vcan-201ENSMUST00000109543 Htatsf1Q8BGC0 757 aa19.38■□□□□ 0.69
Vcan-201ENSMUST00000109543 Fyb1O35601 819 aa19.37■□□□□ 0.69
Vcan-201ENSMUST00000109543 Gcc1Q9D4H2 778 aa19.37■□□□□ 0.69
Vcan-201ENSMUST00000109543 Pcdh10E9PXQ7 1057 aa19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 Scaf1Q5U4C3 1256 aaKnown RBP19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 Gsdma3Q5Y4Y6 464 aa19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 TatQ8QZR1 454 aa19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 Smarca5Q91ZW3 1051 aaKnown RBP19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 Arfgef2A2A5R2 1792 aa19.36■□□□□ 0.69
Vcan-201ENSMUST00000109543 Rimbp3Q3V0F0 1606 aa19.35■□□□□ 0.69
Vcan-201ENSMUST00000109543 Amotl2Q8K371 772 aa19.35■□□□□ 0.69
Vcan-201ENSMUST00000109543 Ncoa4Q5U4H9 625 aa19.34■□□□□ 0.69
Vcan-201ENSMUST00000109543 Thsd7aQ69ZU6 1645 aa19.34■□□□□ 0.69
Vcan-201ENSMUST00000109543 Catsper2A2ARP9 588 aa19.34■□□□□ 0.69
Vcan-201ENSMUST00000109543 GorabQ8BRM2 368 aa19.34■□□□□ 0.69
Vcan-201ENSMUST00000109543 Gimap6Q8K349 305 aa19.34■□□□□ 0.69
Vcan-201ENSMUST00000109543 Gm10093D3YYI8 482 aa19.33■□□□□ 0.69
Vcan-201ENSMUST00000109543 Hdac1O09106 482 aaKnown RBP19.33■□□□□ 0.69
Vcan-201ENSMUST00000109543 Terf2O35144 541 aa19.33■□□□□ 0.69
Vcan-201ENSMUST00000109543 Tnnt1O88346 262 aa19.33■□□□□ 0.69
Vcan-201ENSMUST00000109543 Cc2d1aQ8K1A6 943 aa19.33■□□□□ 0.69
Vcan-201ENSMUST00000109543 Mcm2P97310 904 aa19.33■□□□□ 0.68
Vcan-201ENSMUST00000109543 Chpf2Q3UU43 768 aa19.33■□□□□ 0.68
Vcan-201ENSMUST00000109543 Cyp2d12Q8BVD2 504 aa19.33■□□□□ 0.68
Vcan-201ENSMUST00000109543 TimelessQ9R1X4 1197 aa19.33■□□□□ 0.68
Vcan-201ENSMUST00000109543 Nfat5Q9WV30 1534 aa19.32■□□□□ 0.68
Vcan-201ENSMUST00000109543 Pdlim2Q8R1G6 349 aa19.32■□□□□ 0.68
Vcan-201ENSMUST00000109543 Tfip11Q9ERA6 838 aaKnown RBP19.32■□□□□ 0.68
Vcan-201ENSMUST00000109543 Atf5O70191 283 aa19.31■□□□□ 0.68
Vcan-201ENSMUST00000109543 CenppQ9CZ92 286 aa19.31■□□□□ 0.68
Vcan-201ENSMUST00000109543 Robo1O89026 1612 aa19.31■□□□□ 0.68
Vcan-201ENSMUST00000109543 MlecQ6ZQI3 291 aaKnown RBP19.3■□□□□ 0.68
Vcan-201ENSMUST00000109543 Dnajc10Q9DC23 793 aa19.3■□□□□ 0.68
Vcan-201ENSMUST00000109543 Wdr17E9Q271 1322 aa19.3■□□□□ 0.68
Vcan-201ENSMUST00000109543 Amotl1Q9D4H4 968 aa19.3■□□□□ 0.68
Vcan-201ENSMUST00000109543 Irx6Q9ER75 438 aa19.3■□□□□ 0.68
Vcan-201ENSMUST00000109543 Kdm6aO70546 1401 aa19.29■□□□□ 0.68
Vcan-201ENSMUST00000109543 Atg4a-psA0A0G2JFS9 396 aa19.29■□□□□ 0.68
Vcan-201ENSMUST00000109543 Atg4aQ8C9S8 396 aa19.29■□□□□ 0.68
Vcan-201ENSMUST00000109543 Kcnh5Q920E3 988 aa19.29■□□□□ 0.68
Vcan-201ENSMUST00000109543 Gnai2P08752 355 aaKnown RBP19.29■□□□□ 0.68
Vcan-201ENSMUST00000109543 Nup153E9Q3G8 1462 aaKnown RBP19.27■□□□□ 0.68
Vcan-201ENSMUST00000109543 Disp3A3KFU9 1347 aa19.27■□□□□ 0.67
Vcan-201ENSMUST00000109543 Anapc15-psA0A140T8L6 141 aa19.26■□□□□ 0.67
Vcan-201ENSMUST00000109543 Fmnl2A2APV2 1086 aa19.26■□□□□ 0.67
Vcan-201ENSMUST00000109543 Cyp46a1Q9WVK8 500 aa19.26■□□□□ 0.67
Vcan-201ENSMUST00000109543 Unc13bQ9Z1N9 1602 aa19.26■□□□□ 0.67
Vcan-201ENSMUST00000109543 Srgap3Q812A2 1099 aa19.25■□□□□ 0.67
Vcan-201ENSMUST00000109543 Antxr1Q9CZ52 562 aa19.25■□□□□ 0.67
Vcan-201ENSMUST00000109543 Pnpla7A2AJ88 1352 aa19.25■□□□□ 0.67
Vcan-201ENSMUST00000109543 Rfx1P48377 963 aa19.25■□□□□ 0.67
Vcan-201ENSMUST00000109543 Ppp1r42Q8R1Z4 357 aa19.24■□□□□ 0.67
Vcan-201ENSMUST00000109543 Ppp6r3Q922D4 844 aa19.24■□□□□ 0.67
Vcan-201ENSMUST00000109543 Nsfl1cQ9CZ44 370 aaKnown RBP19.24■□□□□ 0.67
Vcan-201ENSMUST00000109543 Pdia3P27773 505 aaKnown RBP19.24■□□□□ 0.67
Vcan-201ENSMUST00000109543 Myo5bP21271 1818 aa19.23■□□□□ 0.67
Vcan-201ENSMUST00000109543 DiexfQ8BTT6 772 aaKnown RBP19.23■□□□□ 0.67
Vcan-201ENSMUST00000109543 Slain2Q8CI08 581 aa19.23■□□□□ 0.67
Vcan-201ENSMUST00000109543 Nphp1Q9QY53 687 aa19.23■□□□□ 0.67
Vcan-201ENSMUST00000109543 Cyp2d11P24457 504 aa19.22■□□□□ 0.67
Vcan-201ENSMUST00000109543 Eif4a1P60843 406 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms