RNA–Protein interactions for RNA: ENSMUST00000106149.7

Ssx2ip-202, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 2,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-202ENSMUST00000106149 Aifm3Q3TY86 605 aa30.69■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Trim27Q62158 513 aa30.69■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Aldh1l2Q8K009 923 aa30.68■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Hoxc9P09633 260 aa30.68■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Prim1P20664 417 aa30.67■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Kif2cQ922S8 721 aa30.67■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Rab11fip3Q8CHD8 1047 aa30.66■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 CarsQ9ER72 831 aaKnown RBP30.66■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Aplp1Q03157 653 aa30.66■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Slc35g1Q8BY79 368 aa30.66■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 PrkcshO08795 521 aa30.65■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 Snap23O09044 210 aa30.65■■■□□ 2.5
Ssx2ip-202ENSMUST00000106149 HnrnpuQ8VEK3 800 aaKnown RBP30.64■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Gtf3c3Q3TMP1 882 aa30.63■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Wdr63B2RY71 923 aa30.62■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Ano8Q6PB70 1060 aa30.62■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Topaz1E5FYH1 1653 aa30.61■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Scaf1Q5U4C3 1256 aaKnown RBP30.61■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Larp1bA0A0A6YXJ7 370 aaKnown RBP30.58■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Triml2E9PW10 424 aa30.58■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Tm6sf1P58749 370 aa30.58■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 HypkQ9CR41 129 aa30.58■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Tns3Q5SSZ5 1440 aa30.58■■■□□ 2.49
Ssx2ip-202ENSMUST00000106149 Cgnl1Q6AW69 1298 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Phf23Q8BSN5 401 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Igsf1Q7TQA1 1317 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Catsper2A2ARP9 588 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Tmem132eQ6IEE6 982 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Col14a1Q80X19 1797 aa30.57■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Rimbp3Q3V0F0 1606 aa30.56■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Terf2O35144 541 aa30.56■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Eif4g2Q62448 906 aaKnown RBP30.56■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Tmem2Q5FWI3 1383 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Ncapd2Q8K2Z4 1392 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Sv2bQ8BG39 683 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Aldh8a1Q8BH00 487 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Antxr1Q9CZ52 562 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Ahnak2E9PYB0 1738 aaKnown RBP30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Sipa1l2Q80TE4 1722 aa30.55■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Msh6P54276 1358 aaKnown RBP30.54■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Fgd1P52734 960 aa30.53■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Arfgef2A2A5R2 1792 aa30.52■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Thsd7aQ69ZU6 1645 aa30.52■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Fam13aQ8BGI4 693 aa30.52■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Prkar2bP31324 416 aa30.52■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Foxp4Q9DBY0 795 aaKnown RBP30.52■■■□□ 2.48
Ssx2ip-202ENSMUST00000106149 Gm10093D3YYI8 482 aa30.51■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Hdac1O09106 482 aaKnown RBP30.51■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Gcc1Q9D4H2 778 aa30.49■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Tbc1d9Q3UYK3 1264 aa30.49■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Gsdma3Q5Y4Y6 464 aa30.49■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Q3TQI7 289 aaKnown RBP30.48■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Ncoa4Q5U4H9 625 aa30.48■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 FanclQ9CR14 375 aa30.48■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Ccdc146E9Q9F7 977 aa30.47■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Robo1O89026 1612 aa30.47■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Nfat5Q9WV30 1534 aa30.47■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Gimap6Q8K349 305 aa30.46■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Nek4Q9Z1J2 792 aa30.46■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Fyb1O35601 819 aa30.46■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 Fam83gQ5SWY7 812 aa30.46■■■□□ 2.47
Ssx2ip-202ENSMUST00000106149 TatQ8QZR1 454 aa30.44■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Mcm2P97310 904 aa30.44■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Unc13bQ9Z1N9 1602 aa30.43■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Pcdh10E9PXQ7 1057 aa30.43■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 TimelessQ9R1X4 1197 aa30.42■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Kdm6aO70546 1401 aa30.41■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Atf5O70191 283 aa30.41■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 GorabQ8BRM2 368 aa30.4■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Amotl2Q8K371 772 aa30.4■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Tfip11Q9ERA6 838 aaKnown RBP30.4■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Wdr17E9Q271 1322 aa30.39■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 CenppQ9CZ92 286 aa30.39■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Amotl1Q9D4H4 968 aa30.39■■■□□ 2.46
Ssx2ip-202ENSMUST00000106149 Kcnh5Q920E3 988 aa30.38■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Chpf2Q3UU43 768 aa30.38■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Smarca5Q91ZW3 1051 aaKnown RBP30.38■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Rfx1P48377 963 aa30.37■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Nup153E9Q3G8 1462 aaKnown RBP30.37■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Cyp2d12Q8BVD2 504 aa30.37■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Nsfl1cQ9CZ44 370 aaKnown RBP30.36■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Spryd3E9Q9B3 442 aa30.36■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Anapc15-psA0A140T8L6 141 aa30.35■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Dnajc10Q9DC23 793 aa30.35■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Gnai2P08752 355 aaKnown RBP30.34■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Atg4a-psA0A0G2JFS9 396 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Ssh1Q76I79 1042 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Atg4aQ8C9S8 396 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Pnpla7A2AJ88 1352 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Cc2d1aQ8K1A6 943 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Myo5bP21271 1818 aa30.33■■■□□ 2.45
Ssx2ip-202ENSMUST00000106149 Fmnl2A2APV2 1086 aa30.32■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Rsph3aQ3UFY4 516 aa30.32■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Tnnt1O88346 262 aa30.31■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Disp3A3KFU9 1347 aa30.31■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Nid2O88322 1403 aa30.31■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 MlecQ6ZQI3 291 aaKnown RBP30.3■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 ScaperF8VQ70 1398 aaKnown RBP30.29■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Kdm4cQ8VCD7 1054 aa30.29■■■□□ 2.44
Ssx2ip-202ENSMUST00000106149 Cyp46a1Q9WVK8 500 aa30.29■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms