RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 ScaperF8VQ70 1398 aaKnown RBP17.61■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Rtf1A2AQ19 715 aaKnown RBP17.61■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Kdm4cQ8VCD7 1054 aa17.61■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Antxr1Q9CZ52 562 aa17.61■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Dennd6aQ8BH65 605 aa17.6■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Ano8Q6PB70 1060 aa17.59■□□□□ 0.41
Tpm1-202ENSMUST00000034928 Tbc1d9Q3UYK3 1264 aa17.58■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Map2P20357 1828 aa17.58■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Rangap1P46061 589 aaKnown RBP17.57■□□□□ 0.4
Tpm1-202ENSMUST00000034928 1700010I14RikQ7TPG0 532 aa17.57■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Nlgn1Q99K10 843 aa17.57■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Catsper2A2ARP9 588 aa17.56■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Klhdc4Q921I2 584 aa17.56■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Ap3b2Q9JME5 1082 aa17.56■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Camta1A2A891 1682 aa17.56■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Fam13aQ8BGI4 693 aa17.56■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Fgd1P52734 960 aa17.55■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Rsph3aQ3UFY4 516 aa17.55■□□□□ 0.4
Tpm1-202ENSMUST00000034928 GphnQ8BUV3 769 aaKnown RBP17.54■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Foxp4Q9DBY0 795 aaKnown RBP17.54■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Nek4Q9Z1J2 792 aa17.54■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Idi1P58044 227 aa17.54■□□□□ 0.4
Tpm1-202ENSMUST00000034928 HypkQ9CR41 129 aa17.54■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Eya1P97767 591 aa17.53■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Gsdma3Q5Y4Y6 464 aa17.53■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Sv2bQ8BG39 683 aa17.53■□□□□ 0.4
Tpm1-202ENSMUST00000034928 FancaQ9JL70 1439 aa17.53■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Gtf3c3Q3TMP1 882 aa17.52■□□□□ 0.4
Tpm1-202ENSMUST00000034928 Msh6P54276 1358 aaKnown RBP17.52■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Prkar2bP31324 416 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Isy1Q69ZQ2 285 aaKnown RBP17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Cabp4Q8VHC5 271 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Rnf123Q5XPI3 1314 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 PtprvP70289 1705 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Triml2E9PW10 424 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Gm10563F6WIE4 79 aa17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Elp1Q7TT37 1333 aaKnown RBP17.51■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Plin1Q8CGN5 517 aa17.5■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Gm21190A0A0G2JGJ6 266 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 ArxO35085 564 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 NgefQ8CHT1 710 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 FanclQ9CR14 375 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Parp14Q2EMV9 1817 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Hoxc9P09633 260 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Ppip5k2Q6ZQB6 1129 aa17.49■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Atf5O70191 283 aa17.48■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Nucb1Q02819 459 aaKnown RBP17.48■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Ggnbp2Q5SV77 696 aa17.48■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Ncoa4Q5U4H9 625 aa17.48■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Gnai2P08752 355 aaKnown RBP17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Aifm3Q3TY86 605 aa17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Stk36Q69ZM6 1316 aa17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Ccdc146E9Q9F7 977 aa17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Ppp6r3Q922D4 844 aa17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Cyp46a1Q9WVK8 500 aa17.47■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Rimbp3Q3V0F0 1606 aa17.46■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Aplp1Q03157 653 aa17.46■□□□□ 0.39
Tpm1-202ENSMUST00000034928 Gimap6Q8K349 305 aa17.46■□□□□ 0.39
Tpm1-202ENSMUST00000034928 1700019A02RikA0A087WPV9 146 aa17.45■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Prim1P20664 417 aa17.45■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Pdia3P27773 505 aaKnown RBP17.45■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Mcm4P49717 862 aa17.45■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Tfip11Q9ERA6 838 aaKnown RBP17.45■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Q3TQI7 289 aaKnown RBP17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 PtmsQ9D0J8 101 aaKnown RBP17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Kdm6aO70546 1401 aa17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Myo5bP21271 1818 aa17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Arfgef2A2A5R2 1792 aa17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Ssh1Q76I79 1042 aa17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Amotl1Q9D4H4 968 aa17.44■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Abcc12Q80WJ6 1366 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Atg4a-psA0A0G2JFS9 396 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Zkscan2G3X952 960 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Casq1O09165 405 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Ccne1Q61457 408 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 EngaseQ8BX80 734 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Atg4aQ8C9S8 396 aa17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Noc3lQ8VI84 807 aaKnown RBP17.43■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Cnksr1A2A9K7 700 aa17.42■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Sox12Q04890 314 aa17.42■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Nphp1Q9QY53 687 aa17.42■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Atp8b2P98199 1209 aa17.42■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Ecm2Q5FW85 670 aa17.42■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Nup153E9Q3G8 1462 aaKnown RBP17.41■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Mrps27Q8BK72 415 aaKnown RBP17.41■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Kcnh5Q920E3 988 aa17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Atg3Q9CPX6 314 aa17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Tmem2Q5FWI3 1383 aa17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Ahnak2E9PYB0 1738 aaKnown RBP17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Erc2Q6PH08 957 aa17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 GorabQ8BRM2 368 aa17.4■□□□□ 0.38
Tpm1-202ENSMUST00000034928 Robo1O89026 1612 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Nckap5lQ6GQX2 1323 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Ddit3P35639 168 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Rfx1P48377 963 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Pnpla7A2AJ88 1352 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Unc13bQ9Z1N9 1602 aa17.39■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Mmp8O70138 465 aa17.38■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Nsfl1cQ9CZ44 370 aaKnown RBP17.38■□□□□ 0.37
Tpm1-202ENSMUST00000034928 Phf14Q9D4H9 881 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms