RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Ncapd2Q8K2Z4 1392 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Anapc15-psA0A140T8L6 141 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Chl1P70232 1209 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Rsph4aQ8BYM7 716 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Gtf2a1Q99PM3 378 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Cyp46a1Q9WVK8 500 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Rasa1E9PYG6 1038 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Tm6sf1P58749 370 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Rtf1A2AQ19 715 aaKnown RBP20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Bcar3Q9QZK2 820 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Atg4a-psA0A0G2JFS9 396 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Sv2bQ8BG39 683 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Atg4aQ8C9S8 396 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Aldh1l2Q8K009 923 aa20.12■□□□□ 0.81
Trim8-201ENSMUST00000026008 Mcm2P97310 904 aa20.12■□□□□ 0.81
Trim8-201ENSMUST00000026008 Itsn1Q9Z0R4 1714 aa20.11■□□□□ 0.81
Trim8-201ENSMUST00000026008 Nwd1A6H603 1563 aa20.11■□□□□ 0.81
Trim8-201ENSMUST00000026008 Tnnt1O88346 262 aa20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Fam83gQ5SWY7 812 aa20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Zkscan1Q8BGS3 561 aaKnown RBP20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 PtmaP26350 111 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Q3TQI7 289 aaKnown RBP20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Prune1Q8BIW1 454 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Cabp4Q8VHC5 271 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Chd4Q6PDQ2 1915 aaKnown RBP20.08■□□□□ 0.81
Trim8-201ENSMUST00000026008 Spef2Q8C9J3 1734 aa20.08■□□□□ 0.81
Trim8-201ENSMUST00000026008 Hoxb7P09024 217 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Tmx3Q8BXZ1 456 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 PtpruB1AUH1 1446 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 MyclP10166 368 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gdpd2Q9ESM6 539 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Srgap3Q812A2 1099 aa20.07■□□□□ 0.8
Trim8-201ENSMUST00000026008 Cyp27a1Q9DBG1 533 aa20.07■□□□□ 0.8
Trim8-201ENSMUST00000026008 Hmox1P14901 289 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Hsp90b1P08113 802 aaKnown RBP20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Erc2Q6PH08 957 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Erich6bQ9D4S6 220 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Isy1Q69ZQ2 285 aaKnown RBP20.05■□□□□ 0.8
Trim8-201ENSMUST00000026008 Phactr2B1AVP0 632 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Q3UJC8 639 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 PplQ9R269 1755 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gm21190A0A0G2JGJ6 266 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Ppp1r42Q8R1Z4 357 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Nckap5lQ6GQX2 1323 aa20.03■□□□□ 0.8
Trim8-201ENSMUST00000026008 Zkscan16A2ALW2 728 aa20.03■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gnai2P08752 355 aaKnown RBP20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Tshz3Q8CGV9 1081 aa20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Nphp1Q9QY53 687 aa20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gemin5Q8BX17 1502 aaKnown RBP20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Eya1P97767 591 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Ccne1Q61457 408 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 4930407I10RikD3Z5T8 1512 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Rrp9Q91WM3 475 aaKnown RBP20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Cwc27Q3TKY6 469 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Ptpdc1Q6NZK8 747 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 RestQ8VIG1 1082 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Elp1Q7TT37 1333 aaKnown RBP20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Kif20bQ80WE4 1774 aaKnown RBP20■□□□□ 0.79
Trim8-201ENSMUST00000026008 PogkQ80TC5 607 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zdhhc9P59268 364 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Dennd6aQ8BH65 605 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zkscan2G3X952 960 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Phf23Q8BSN5 401 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Kif1aP33173 1695 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Rrp12Q6P5B0 1295 aaKnown RBP19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Dip2aQ8BWT5 1523 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Gadd45bP22339 160 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Cpa2Q504N0 417 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 NexnQ7TPW1 607 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Astn2Q80Z10 1352 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Gm9992B2RWK3 458 aa19.97■□□□□ 0.79
Trim8-201ENSMUST00000026008 Unc93aQ710D3 458 aa19.97■□□□□ 0.79
Trim8-201ENSMUST00000026008 Nol12Q8BG17 217 aa19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zc3h13E9Q784 1729 aaKnown RBP19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Pik3c2bE9QAN8 1632 aa19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zfp777B9EKF4 885 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rnf214Q8BFU3 668 aaKnown RBP19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Syce3B5KM66 88 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 4931400O07RikQ9D4M5 137 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rtn4Q99P72 1162 aaKnown RBP19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mdc1Q5PSV9 1707 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Idi1P58044 227 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 ImpactO55091 318 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Chpf2Q3UU43 768 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mrps27Q8BK72 415 aaKnown RBP19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Parp14Q2EMV9 1817 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Tmem132eQ6IEE6 982 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Jakmip1Q8BVL9 626 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Nlgn1Q99K10 843 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rbm27Q5SFM8 1060 aaKnown RBP19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 FancaQ9JL70 1439 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mmp8O70138 465 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Filip1lQ6P6L0 1131 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Dip2bQ3UH60 1574 aa19.92■□□□□ 0.78
Trim8-201ENSMUST00000026008 MccE9PWI3 1003 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 Dhx16G3X8X0 1044 aaKnown RBP19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 EvcP57680 1005 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 PzpQ61838 1495 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 Ddrgk1Q80WW9 315 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms