RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Ncapd2Q8K2Z4 1392 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Anapc15-psA0A140T8L6 141 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Chl1P70232 1209 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Rsph4aQ8BYM7 716 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Gtf2a1Q99PM3 378 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Cyp46a1Q9WVK8 500 aa20.14■□□□□ 0.82
Trim8-201ENSMUST00000026008 Rasa1E9PYG6 1038 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Tm6sf1P58749 370 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Rtf1A2AQ19 715 aaKnown RBP20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Bcar3Q9QZK2 820 aa20.14■□□□□ 0.81
Trim8-201ENSMUST00000026008 Atg4a-psA0A0G2JFS9 396 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Sv2bQ8BG39 683 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Atg4aQ8C9S8 396 aa20.13■□□□□ 0.81
Trim8-201ENSMUST00000026008 Aldh1l2Q8K009 923 aa20.12■□□□□ 0.81
Trim8-201ENSMUST00000026008 Mcm2P97310 904 aa20.12■□□□□ 0.81
Trim8-201ENSMUST00000026008 Itsn1Q9Z0R4 1714 aa20.11■□□□□ 0.81
Trim8-201ENSMUST00000026008 Nwd1A6H603 1563 aa20.11■□□□□ 0.81
Trim8-201ENSMUST00000026008 Tnnt1O88346 262 aa20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Fam83gQ5SWY7 812 aa20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 Zkscan1Q8BGS3 561 aaKnown RBP20.1■□□□□ 0.81
Trim8-201ENSMUST00000026008 PtmaP26350 111 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Q3TQI7 289 aaKnown RBP20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Prune1Q8BIW1 454 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Cabp4Q8VHC5 271 aa20.09■□□□□ 0.81
Trim8-201ENSMUST00000026008 Chd4Q6PDQ2 1915 aaKnown RBP20.08■□□□□ 0.81
Trim8-201ENSMUST00000026008 Spef2Q8C9J3 1734 aa20.08■□□□□ 0.81
Trim8-201ENSMUST00000026008 Hoxb7P09024 217 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Tmx3Q8BXZ1 456 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 PtpruB1AUH1 1446 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 MyclP10166 368 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gdpd2Q9ESM6 539 aa20.08■□□□□ 0.8
Trim8-201ENSMUST00000026008 Srgap3Q812A2 1099 aa20.07■□□□□ 0.8
Trim8-201ENSMUST00000026008 Cyp27a1Q9DBG1 533 aa20.07■□□□□ 0.8
Trim8-201ENSMUST00000026008 Hmox1P14901 289 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Hsp90b1P08113 802 aaKnown RBP20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Erc2Q6PH08 957 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Erich6bQ9D4S6 220 aa20.06■□□□□ 0.8
Trim8-201ENSMUST00000026008 Isy1Q69ZQ2 285 aaKnown RBP20.05■□□□□ 0.8
Trim8-201ENSMUST00000026008 Phactr2B1AVP0 632 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Q3UJC8 639 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 PplQ9R269 1755 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gm21190A0A0G2JGJ6 266 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Ppp1r42Q8R1Z4 357 aa20.04■□□□□ 0.8
Trim8-201ENSMUST00000026008 Nckap5lQ6GQX2 1323 aa20.03■□□□□ 0.8
Trim8-201ENSMUST00000026008 Zkscan16A2ALW2 728 aa20.03■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gnai2P08752 355 aaKnown RBP20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Tshz3Q8CGV9 1081 aa20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Nphp1Q9QY53 687 aa20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Gemin5Q8BX17 1502 aaKnown RBP20.02■□□□□ 0.8
Trim8-201ENSMUST00000026008 Eya1P97767 591 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Ccne1Q61457 408 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 4930407I10RikD3Z5T8 1512 aa20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Rrp9Q91WM3 475 aaKnown RBP20.01■□□□□ 0.79
Trim8-201ENSMUST00000026008 Cwc27Q3TKY6 469 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Ptpdc1Q6NZK8 747 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 RestQ8VIG1 1082 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Elp1Q7TT37 1333 aaKnown RBP20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Kif20bQ80WE4 1774 aaKnown RBP20■□□□□ 0.79
Trim8-201ENSMUST00000026008 PogkQ80TC5 607 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zdhhc9P59268 364 aa20■□□□□ 0.79
Trim8-201ENSMUST00000026008 Dennd6aQ8BH65 605 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zkscan2G3X952 960 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Phf23Q8BSN5 401 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Kif1aP33173 1695 aa19.99■□□□□ 0.79
Trim8-201ENSMUST00000026008 Rrp12Q6P5B0 1295 aaKnown RBP19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Dip2aQ8BWT5 1523 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Gadd45bP22339 160 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Cpa2Q504N0 417 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 NexnQ7TPW1 607 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Astn2Q80Z10 1352 aa19.98■□□□□ 0.79
Trim8-201ENSMUST00000026008 Gm9992B2RWK3 458 aa19.97■□□□□ 0.79
Trim8-201ENSMUST00000026008 Unc93aQ710D3 458 aa19.97■□□□□ 0.79
Trim8-201ENSMUST00000026008 Nol12Q8BG17 217 aa19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zc3h13E9Q784 1729 aaKnown RBP19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Pik3c2bE9QAN8 1632 aa19.96■□□□□ 0.79
Trim8-201ENSMUST00000026008 Zfp777B9EKF4 885 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rnf214Q8BFU3 668 aaKnown RBP19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Syce3B5KM66 88 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 4931400O07RikQ9D4M5 137 aa19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rtn4Q99P72 1162 aaKnown RBP19.95■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mdc1Q5PSV9 1707 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Idi1P58044 227 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 ImpactO55091 318 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Chpf2Q3UU43 768 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mrps27Q8BK72 415 aaKnown RBP19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Parp14Q2EMV9 1817 aa19.94■□□□□ 0.78
Trim8-201ENSMUST00000026008 Tmem132eQ6IEE6 982 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Jakmip1Q8BVL9 626 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Nlgn1Q99K10 843 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Rbm27Q5SFM8 1060 aaKnown RBP19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 FancaQ9JL70 1439 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Mmp8O70138 465 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Filip1lQ6P6L0 1131 aa19.93■□□□□ 0.78
Trim8-201ENSMUST00000026008 Dip2bQ3UH60 1574 aa19.92■□□□□ 0.78
Trim8-201ENSMUST00000026008 MccE9PWI3 1003 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 Dhx16G3X8X0 1044 aaKnown RBP19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 EvcP57680 1005 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 PzpQ61838 1495 aa19.91■□□□□ 0.78
Trim8-201ENSMUST00000026008 Ddrgk1Q80WW9 315 aa19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms