RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W FAR11P53917 953 aa10.69□□□□□ -0.7
BRR1YPR057W RPT6Q01939 405 aaKnown RBP10.69□□□□□ -0.7
BRR1YPR057W ATG20Q07528 640 aa10.69□□□□□ -0.7
BRR1YPR057W DCS2Q12123 353 aa10.69□□□□□ -0.7
BRR1YPR057W CDC6P09119 513 aa10.68□□□□□ -0.7
BRR1YPR057W PRE8P23639 250 aa10.68□□□□□ -0.7
BRR1YPR057W ASF1P32447 279 aa10.68□□□□□ -0.7
BRR1YPR057W RXT2P38255 430 aa10.68□□□□□ -0.7
BRR1YPR057W GDE1Q02979 1223 aa10.68□□□□□ -0.7
BRR1YPR057W NPR3P38742 1146 aa10.67□□□□□ -0.7
BRR1YPR057W UTP7P40055 554 aaKnown RBP10.67□□□□□ -0.7
BRR1YPR057W PCI8P40512 444 aa10.67□□□□□ -0.7
BRR1YPR057W MTC3P53077 123 aa10.67□□□□□ -0.7
BRR1YPR057W GET3Q12154 354 aaKnown RBP10.67□□□□□ -0.7
BRR1YPR057W HXK1P04806 485 aaKnown RBP10.66□□□□□ -0.7
BRR1YPR057W VPS1P21576 704 aaKnown RBP10.66□□□□□ -0.7
BRR1YPR057W SRM1P21827 482 aa10.66□□□□□ -0.7
BRR1YPR057W YPT11P48559 417 aa10.66□□□□□ -0.7
BRR1YPR057W SEN54Q02825 467 aaPredicted RBP10.66□□□□□ -0.7
BRR1YPR057W CLF1Q12309 687 aaPredicted RBP10.66□□□□□ -0.7
BRR1YPR057W TRS33Q99394 268 aa10.66□□□□□ -0.7
BRR1YPR057W MET6P05694 767 aaKnown RBP10.65□□□□□ -0.7
BRR1YPR057W GPA1P08539 472 aa10.65□□□□□ -0.7
BRR1YPR057W RPL8BP29453 256 aaKnown RBP10.65□□□□□ -0.7
BRR1YPR057W PES4P39684 611 aa10.65□□□□□ -0.7
BRR1YPR057W AAD16Q02895 342 aa10.65□□□□□ -0.7
BRR1YPR057W YDR341CQ05506 607 aaKnown RBP10.65□□□□□ -0.7
BRR1YPR057W SKG3Q06315 1026 aa10.65□□□□□ -0.7
BRR1YPR057W CEX1Q12453 761 aa10.65□□□□□ -0.7
BRR1YPR057W TAF13P11747 167 aa10.64□□□□□ -0.71
BRR1YPR057W RGP1P16664 663 aa10.64□□□□□ -0.71
BRR1YPR057W FPK1P53739 893 aa10.64□□□□□ -0.71
BRR1YPR057W FOL1P53848 824 aa10.64□□□□□ -0.71
BRR1YPR057W TRM44Q02648 567 aaKnown RBP10.64□□□□□ -0.71
BRR1YPR057W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.64□□□□□ -0.71not detected
BRR1YPR057W KIN1P13185 1064 aa10.63□□□□□ -0.71
BRR1YPR057W SRP54P20424 541 aaKnown RBP10.63□□□□□ -0.71
BRR1YPR057W ADP1P25371 1049 aa10.63□□□□□ -0.71
BRR1YPR057W CHS3P29465 1165 aa10.63□□□□□ -0.71
BRR1YPR057W YKT6P36015 200 aaKnown RBP10.63□□□□□ -0.71
BRR1YPR057W STV1P37296 890 aa10.63□□□□□ -0.71
BRR1YPR057W TOM71P38825 639 aaKnown RBP10.63□□□□□ -0.71
BRR1YPR057W YER130CP39959 443 aa10.63□□□□□ -0.71
BRR1YPR057W VPS4P52917 437 aa10.63□□□□□ -0.71
BRR1YPR057W NAF1P53919 492 aaKnown RBP10.63□□□□□ -0.71
BRR1YPR057W YPR148CQ06523 435 aa10.63□□□□□ -0.71
BRR1YPR057W YDL124WQ07551 312 aaKnown RBP10.63□□□□□ -0.71
BRR1YPR057W DSE3Q08729 430 aa10.63□□□□□ -0.71
BRR1YPR057W NUC1P08466 329 aa10.62□□□□□ -0.71
BRR1YPR057W ACE2P21192 770 aa10.62□□□□□ -0.71
BRR1YPR057W URA1P28272 314 aaPredicted RBP10.62□□□□□ -0.71
BRR1YPR057W MCM4P30665 933 aaKnown RBP10.62□□□□□ -0.71
BRR1YPR057W GLC3P32775 704 aa10.62□□□□□ -0.71
BRR1YPR057W YBL028CP38202 106 aa10.62□□□□□ -0.71
BRR1YPR057W YGL138CP53122 345 aa10.62□□□□□ -0.71
BRR1YPR057W SQS1P53866 767 aaKnown RBP10.62□□□□□ -0.71
BRR1YPR057W MDM1Q01846 1127 aa10.62□□□□□ -0.71
BRR1YPR057W VPS30Q02948 557 aa10.62□□□□□ -0.71
BRR1YPR057W SGD1Q06132 899 aa10.62□□□□□ -0.71
BRR1YPR057W CSC1Q06538 782 aa10.62□□□□□ -0.71
BRR1YPR057W CIT1P00890 479 aa10.61□□□□□ -0.71
BRR1YPR057W RPL22AP05749 121 aaKnown RBP10.61□□□□□ -0.71
BRR1YPR057W GAP1P19145 602 aaPredicted RBP10.61□□□□□ -0.71
BRR1YPR057W CUE3P53137 624 aaKnown RBP10.61□□□□□ -0.71
BRR1YPR057W NBL1Q3E7Y6 73 aa10.61□□□□□ -0.71
BRR1YPR057W TUS1Q06412 1307 aa10.6□□□□□ -0.71
BRR1YPR057W PMA1P05030 918 aaKnown RBP10.6□□□□□ -0.71
BRR1YPR057W STI1P15705 589 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
BRR1YPR057W ATE1P16639 503 aa10.6□□□□□ -0.71
BRR1YPR057W RAD53P22216 821 aa10.6□□□□□ -0.71
BRR1YPR057W MCM3P24279 971 aaKnown RBP10.6□□□□□ -0.71
BRR1YPR057W MRPL10P36520 322 aa10.6□□□□□ -0.71
BRR1YPR057W CST26P38226 397 aa10.6□□□□□ -0.71
BRR1YPR057W SNU71P53207 620 aaKnown RBP10.6□□□□□ -0.71
BRR1YPR057W YGR117CP53270 476 aa10.6□□□□□ -0.71
BRR1YPR057W TIM50Q02776 476 aa10.6□□□□□ -0.71
BRR1YPR057W PTC5Q12511 572 aa10.6□□□□□ -0.71
BRR1YPR057W SPB4P25808 606 aaPredicted RBP10.59□□□□□ -0.71
BRR1YPR057W MIC60P36112 540 aa10.59□□□□□ -0.71
BRR1YPR057W RRM3P38766 723 aa10.59□□□□□ -0.71
BRR1YPR057W FET4P40988 552 aa10.59□□□□□ -0.71
BRR1YPR057W SSL2Q00578 843 aa10.59□□□□□ -0.71
BRR1YPR057W GIS4Q04233 774 aa10.59□□□□□ -0.71
BRR1YPR057W VMS1Q04311 632 aaKnown RBP10.59□□□□□ -0.71
BRR1YPR057W TIP41Q12199 356 aa10.59□□□□□ -0.71
BRR1YPR057W HPR1P17629 752 aaKnown RBP10.58□□□□□ -0.72
BRR1YPR057W MAK11P20484 414 aaKnown RBP10.58□□□□□ -0.72
BRR1YPR057W SLI15P38283 698 aa10.58□□□□□ -0.72
BRR1YPR057W CCT3P39077 534 aaKnown RBP10.58□□□□□ -0.72
BRR1YPR057W EIS1Q05050 843 aaKnown RBP10.58□□□□□ -0.72
BRR1YPR057W YOR296WQ08748 1289 aa10.58□□□□□ -0.72
BRR1YPR057W ALG1P16661 449 aa10.57□□□□□ -0.72
BRR1YPR057W GSY2P27472 705 aa10.57□□□□□ -0.72
BRR1YPR057W BMH1P29311 267 aaKnown RBP10.57□□□□□ -0.72
BRR1YPR057W SRP40P32583 406 aaPredicted RBP10.57□□□□□ -0.72
BRR1YPR057W MPE1P35728 441 aaKnown RBP10.57□□□□□ -0.72
BRR1YPR057W KEL1P38853 1164 aaKnown RBP10.57□□□□□ -0.72
BRR1YPR057W VPS45P38932 577 aa10.57□□□□□ -0.72
BRR1YPR057W RTC4P53850 401 aa10.57□□□□□ -0.72
BRR1YPR057W MMR1Q06324 491 aa10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms