RNA–Protein interactions for RNA: YPL204W

HRR25, Transcript of Protein kinase, yeast

Gene HRR25, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRR25	YPL204W	SHC1	P39000	512 aa		5.71	□□□□□ -1.5
HRR25	YPL204W	IRC4	Q03036	179 aa		5.71	□□□□□ -1.5
HRR25	YPL204W	LCB1	P25045	558 aa	Known RBP	5.7	□□□□□ -1.5
HRR25	YPL204W	MRPS35	P53292	345 aa		5.7	□□□□□ -1.5
HRR25	YPL204W	OPT2	Q06593	877 aa		5.7	□□□□□ -1.5
HRR25	YPL204W	SRF1	Q12516	437 aa		5.7	□□□□□ -1.5
HRR25	YPL204W	KTR1	P27810	393 aa	Known RBP	5.69	□□□□□ -1.5
HRR25	YPL204W	GEF1	P37020	779 aa		5.69	□□□□□ -1.5
HRR25	YPL204W	FPK1	P53739	893 aa		5.69	□□□□□ -1.5
HRR25	YPL204W	ERF2	Q06551	359 aa		5.69	□□□□□ -1.5
HRR25	YPL204W	CYB2	P00175	591 aa		5.68	□□□□□ -1.5
HRR25	YPL204W	TOP1	P04786	769 aa		5.68	□□□□□ -1.5
HRR25	YPL204W	VAS1	P07806	1104 aa	Known RBP	5.68	□□□□□ -1.5
HRR25	YPL204W	PSE1	P32337	1089 aa	Known RBP	5.68	□□□□□ -1.5
HRR25	YPL204W	PBY1	P38254	753 aa		5.68	□□□□□ -1.5
HRR25	YPL204W	JJJ2	P46997	583 aa		5.68	□□□□□ -1.5
HRR25	YPL204W	INM2	Q05533	292 aa		5.68	□□□□□ -1.5
HRR25	YPL204W	BRN1	P38170	754 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	STM1	P39015	273 aa	Known RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	YIR042C	P40586	236 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	YFH7	P43591	353 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	ENP2	P48234	707 aa	Known RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	SQS1	P53866	767 aa	Known RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	RMD1	Q03441	430 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	PRP42	Q03776	544 aa	Known RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	HPF1	Q05164	967 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	ATG20	Q07528	640 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	RIM20	Q12033	661 aa		5.67	□□□□□ -1.5
HRR25	YPL204W	WRS1	Q12109	432 aa	Known RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	RRG1	Q12167	365 aa	Predicted RBP	5.67	□□□□□ -1.5
HRR25	YPL204W	ARG82	P07250	355 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	OPI1	P21957	404 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	DLD1	P32891	587 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	AAP1	P37898	856 aa	Known RBP	5.66	□□□□□ -1.5
HRR25	YPL204W	PIB2	P53191	635 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	CRF1	Q04930	467 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	TOS4	Q06266	489 aa		5.66	□□□□□ -1.5
HRR25	YPL204W	ACK1	Q07622	623 aa	Predicted RBP	5.66	□□□□□ -1.5
HRR25	YPL204W	SNF3	P10870	884 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	TPM1	P17536	199 aa	Known RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	MSM1	P22438	575 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	PTK1	P36002	662 aa	Predicted RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	YMR147W	P40218	223 aa	Known RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	IOC3	P43596	787 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	NUP42	P49686	430 aa	Known RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	KAR5	Q04746	504 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	FPR4	Q06205	392 aa	Predicted RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	GAS5	Q08193	484 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	PUS1	Q12211	544 aa	Known RBP	5.65	□□□□□ -1.5
HRR25	YPL204W	FLO1	P32768	1537 aa		5.65	□□□□□ -1.5
HRR25	YPL204W	AFG2	P32794	780 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	RPT3	P33298	428 aa	Known RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	BOI1	P38041	980 aa	Known RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	YIR014W	P40570	242 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	GSM1	P42950	618 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	IRC8	P47046	822 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	PTK2	P47116	818 aa	Known RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	TUB4	P53378	473 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	TAH18	Q12181	623 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	FLO11	P08640	1367 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	LAM4	P38800	1345 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	RPS7A	P26786	190 aa	Known RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	MDL2	P33311	773 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	GRX7	P38068	203 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	HXT13	P39924	564 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	APL6	P46682	809 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	TIM50	Q02776	476 aa		5.64	□□□□□ -1.51
HRR25	YPL204W	SYH1	Q02875	849 aa	Known RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	PKH3	Q03306	898 aa	Predicted RBP	5.64	□□□□□ -1.51
HRR25	YPL204W	GLC3	P32775	704 aa		5.63	□□□□□ -1.51
HRR25	YPL204W	MET1	P36150	593 aa		5.63	□□□□□ -1.51
HRR25	YPL204W	GLY1	P37303	387 aa	Known RBP	5.63	□□□□□ -1.51
HRR25	YPL204W	LSB3	P43603	459 aa	Known RBP	5.63	□□□□□ -1.51
HRR25	YPL204W	PIP2	P52960	996 aa		5.63	□□□□□ -1.51
HRR25	YPL204W	PUS6	P53294	404 aa		5.63	□□□□□ -1.51
HRR25	YPL204W	HXT17	P53631	564 aa		5.63	□□□□□ -1.51
HRR25	YPL204W	SSF2	Q12153	453 aa	Predicted RBP	5.63	□□□□□ -1.51
HRR25	YPL204W	YLR278C	Q05854	1341 aa		5.62	□□□□□ -1.51
HRR25	YPL204W	DIT2	P21595	489 aa		5.62	□□□□□ -1.51
HRR25	YPL204W	CLB5	P30283	435 aa		5.62	□□□□□ -1.51
HRR25	YPL204W	RTG2	P32608	588 aa	Known RBP	5.62	□□□□□ -1.51
HRR25	YPL204W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
HRR25	YPL204W	YIR007W	P40566	764 aa		5.62	□□□□□ -1.51
HRR25	YPL204W	SCW11	P53189	542 aa		5.62	□□□□□ -1.51
HRR25	YPL204W	RRP8	P38961	392 aa	Known RBP	5.61	□□□□□ -1.51
HRR25	YPL204W	SPO22	P40511	975 aa		5.61	□□□□□ -1.51
HRR25	YPL204W	TRM44	Q02648	567 aa	Known RBP	5.61	□□□□□ -1.51
HRR25	YPL204W	SEN54	Q02825	467 aa	Predicted RBP	5.61	□□□□□ -1.51
HRR25	YPL204W	AGE1	Q04412	482 aa		5.61	□□□□□ -1.51
HRR25	YPL204W	TYW1	Q08960	810 aa	Known RBP	5.61	□□□□□ -1.51
HRR25	YPL204W	GSC2	P40989	1895 aa		5.61	□□□□□ -1.51
HRR25	YPL204W	THS1	P04801	734 aa	Known RBP	5.6	□□□□□ -1.51
HRR25	YPL204W	RNR2	P09938	399 aa	Known RBP	5.6	□□□□□ -1.51
HRR25	YPL204W	STV1	P37296	890 aa		5.6	□□□□□ -1.51
HRR25	YPL204W	UTP7	P40055	554 aa	Known RBP	5.6	□□□□□ -1.51
HRR25	YPL204W	MSH4	P40965	878 aa	Predicted RBP	5.6	□□□□□ -1.51
HRR25	YPL204W	FET4	P40988	552 aa		5.6	□□□□□ -1.51
HRR25	YPL204W	VPS4	P52917	437 aa		5.6	□□□□□ -1.51
HRR25	YPL204W	KXD1	P53158	218 aa		5.6	□□□□□ -1.51
HRR25	YPL204W	YGR117C	P53270	476 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms